Ctenopharyngodon idella (grass carp): 127496771
Help
Entry
127496771 CDS
T08802
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127496771
Membrane trafficking [BR:
cide04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
127496771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_1
Ig_3
ig
LRR_EndoS
LRR_Zer-1
LRRNT
Ig_2
V-set
LRR_9
LRR_6
C2-set_2
C2-set_3
Motif
Other DBs
NCBI-GeneID:
127496771
NCBI-ProteinID:
XP_051720491
LinkDB
All DBs
Position
16:23293377..23310803
Genome browser
AA seq
604 aa
AA seq
DB search
MFMDLCGQRGAWTVLLLWCLNLSAADFTCPQKCTCYHDTLEVNCSSRHLTGVPEGLPSNA
KRLDLSGNQLKTLARRQFSGLSKLEDLDLSENIISMIEVETFQGLKNLRYLRIKNNRLKI
LPVGVFSGLSNLQRLDISENEILVFLDYTFRDMINLQQLDAGENDLVFISQRAFVGLQAL
KELNVDRSNLTSIPTEALSQLQSLTKLRLRKLTISVLPNNAFRRLHQLRTLQILHWPSLE
TLNSNSLVGLNLTTLVLSNCNLSSVPYAPLRHLTYLQYLDLSYNPITSIQGNLLGELLRL
QELHLVGGSLLRIEPGAFRGLVHFRLLNVSSNRLTTLEESVFHSVGNLQTLRLDRNPLAC
DCRLLWVVRRRRRLDFDGRQPTCSALNQHKKAFRDFSEDDLPVIFTCRQAQILNRQLQDV
SVVEGMSIRFDCRADGYPSPSITWLSAQQTALSSVGRVRVLANGSLEVRYAQVQDSGTYL
CIAANAAGNDSISMSLQVEGIPQNRTASYFSDEGWMETSLPPSTNSSARVSNPYPFDAKT
LIIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDFVPRSSMGGGGDGGDTGRFT
MKLI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgttcatggatctgtgtggccagcggggcgcatggacagtcctgctgttgtggtgccta
aacctatcagctgctgacttcacctgcccacagaaatgcacttgttatcatgacacattg
gaggtcaactgctcctcaagacacctgacaggtgtgcctgaggggttacccagcaatgcc
aaacgcttagatctttcaggaaaccaattgaaaacgttggctagacgtcagttttccggt
ctgtcaaagctggaggacctggacttgagcgagaacattatctccatgattgaggtggaa
acatttcaggggctgaagaacctgcgatacttgaggataaagaacaaccgcctcaagatc
ctccccgtcggggtcttctctggcctctccaaccttcaacgtctggatatcagtgagaat
gagatcctggttttcctggattacacattccgggacatgattaacttacagcagctcgat
gcaggagaaaacgacctggtgtttatctcgcaacgggcttttgttgggctgcaggcgctg
aaagagctgaacgtggaccgcagcaatctaacctccatccccactgaggctctgtcgcaa
cttcagagcttgaccaagctgcgtctgcgcaagctgaccataagcgtgctgcccaacaac
gcctttcgccgactgcaccagctgcgcacattgcagatcctccattggccttctctcgag
acgcttaatagcaacagcctggtcggtctcaaccttaccactttagttttaagcaactgt
aaccttagctctgtaccttacgctcccttgcgccatctcacttacctgcagtatctcgac
ctgtcctacaaccccatcacctccatacaaggcaacttgctgggggagcttcttcggctg
caggagttgcacctggtaggtgggagcttgttacgtattgagccgggtgccttcaggggt
ctggtccactttcgtttgctcaatgtgtcctcaaatcgtctaacgacattggaagaaagt
gtcttccactccgtagggaacttgcagacactgcggctggacagaaacccgttggcttgc
gactgcaggctactctgggttgtgcgacggcgtcggcggctggattttgatggccgccaa
cccacctgttcggctctgaatcagcacaagaaggcatttcgtgacttttcagaggatgac
cttccagttatatttacgtgcagacaagcacagattctgaaccgccagctgcaggatgtg
agtgtggtggagggcatgagcatacgctttgactgcagagccgacggctatccgtcgcct
tctattacttggctgtcagcccaacagactgcacttagctctgtcgggagagtacgagtg
cttgctaatgggagtttagaagtgcgttacgcccaagtacaggacagtggaacgtatcta
tgtattgcagctaatgcagcgggtaatgacagcatctccatgagtctccaagtggagggg
atcccacaaaaccgcacagcatcgtatttctcagacgagggatggatggaaacttcatta
cctccttctaccaactcctcggcacgggtgtcaaatccttacccatttgatgctaaaacc
ctcatcattgctaccaccatgggatttctctctttcctcagctctgtggcgatctgtttt
gtgtttatgttcttctggagtcagagcaaaggacagataaaacacactgccactatagac
ttcgtgccacgatcatccatgggtggaggtggagatggtggggacactgggagattcaca
atgaagcttatttga
DBGET
integrated database retrieval system
