Ctenopharyngodon idella (grass carp): 127496797
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Entry
127496797 CDS
T08802
Name
(RefSeq) integrin alpha-10
KO
K06586
integrin alpha 10
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04510
Focal adhesion
cide04512
ECM-receptor interaction
cide04810
Regulation of actin cytoskeleton
cide04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127496797
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127496797
09142 Cell motility
04820 Cytoskeleton in muscle cells
127496797
04810 Regulation of actin cytoskeleton
127496797
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cide04515
]
127496797
Cell adhesion molecules [BR:
cide04515
]
Integrins
Integrin alpha subunits
127496797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
Integrin_A_Ig_3
FG-GAP_3
FG-GAP_2
vWA_SIBA-E
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
127496797
NCBI-ProteinID:
XP_051720533
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All DBs
Position
16:14338917..14388454
Genome browser
AA seq
1170 aa
AA seq
DB search
MEIHKYLLLLKITVLLKGLCECFNIDVKRPRIFSGPENALFGFSVLQHEDNGEKSILVGA
PWDGPQNNRKGDIYKCIVEDEINSNCSKVNLGENAFQNVSRNFKNSHLGMTLTPAASDGF
LACAPLWSQECGTSLFSTGICASVTNDMEPKDIIAPTARRCTTYMDIVIVLDGSNSIYPW
YEVQNFLSNILSKFHISPEQMQVGVLQYGEISVHEWSLRDYQTTQDVVEAAKNISRQEGR
ETRTAYAIQMACTEAFSPDRGAREGATKVMIVVTDGESHDGEDLPESLAECEKRNITRYA
IAVLGHYIRRQQDPETFINEIKYIASDPDEKYFFNVTDEAALNDIVDALGDRIFSLEGTL
GYNESAFLMEMSQIGFSTHILDDGILFGMVGAYDWEGGVLKESKEGQLIPSREAFEKEFP
LELKNHAAYLGYTVSSVVVGDWRRLYVAGAPRFKHKGKVILFDLTPEGDVIITQALNGEQ
IGSYFGSEVCVVDVDQDGITDILLIAAPMFLGAGNKETGKVYIYCLDGDGFAPNGTLHSQ
KAQDARFGYAMAVANDLNHDGYADLLVGAPLEDDHQGALYIYHGDEYYIIPQYKQRIPGS
ALSAGLQYFGRSLSALLDLDGDELLDLAVGAQGTAVLLKSRSIVQINVSLSFQPHSINVI
QKNCHKAGRDSACLNATVCFLALSRSPGSYGTYFDMQMGAMLDDRKISARALFDYNSQRQ
TMMGVSVRVGQTMCYTLPFHVFDTADYIRPISFTLHFKINDTESGPVLDEGWSTTFKKSI
PFYKDCGEDDVCVTDLVLQAHMDISGTRQQPYVLRSPRRRLAVEVQLQNQLENAYNTSLT
LHYSKNLHFSSLSIREDTQFKIECTALSSNSHSCNVSYPVFRSQSKVKFMLEFEFSCTSL
ISKVQMRLVASSDSLENEGTLSDNSVQLQSIVQYEPDLFITSDSNLNRYEVHPTRTVSEG
TGPEFFTHFTVQNLGCYAVRNLELSVNLPSVASGDRVFATVVDAFSHNASGVNCSIVSDL
SKLKSSQRDVRPLHPEDMKKTELLNCTSSWCVEVVCHIQQLLKGEIALIRITRRIHDNFF
RQAKFKAVTIVGSYQLSARESNLITMGNAALLRETVLEVLKGRSIPISLWILIGSIIGGL
LLLALLVFILWKLGFFTRIQRKDEDEKDDN
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggagatccacaagtacctgctgttgttaaagatcactgttcttctcaaagggctgtgt
gagtgttttaatattgatgtgaagaggccacggatcttcagtggacctgaaaatgctctg
ttcggcttctctgtgctacagcacgaggacaatggagaaaaatcaattctggttggtgct
ccatgggatggaccacaaaataacaggaagggagatatttacaagtgcattgtggaagat
gagatcaattctaattgctcaaaagttaacctaggtgaaaatgcatttcagaacgtgtct
cgaaattttaaaaactctcatttggggatgacgctgacccctgctgcttcagatggcttc
ctggcctgcgctccactgtggtcccaggaatgtggtacatctctgtttagcacaggaatt
tgtgcgtctgtcaccaatgacatggagcccaaggacatcattgcgcctactgcccggagg
tgcacgacatacatggacatagtgattgttttagatggttctaatagtatctacccctgg
tacgaggtgcagaacttccttagcaacattctcagcaagttccacataagtcctgagcaa
atgcaggttggtgtcctgcagtacggggagatctcagtacacgagtggtctctcagggac
tatcagacaacacaggatgtggttgaagccgccaagaacatcagtcgtcaggagggacgg
gagacccgcactgcgtacgccatccaaatggcctgcacggaagcctttagtccagacaga
ggagcaagggaaggagccactaaagtgatgatagtcgtgacagatggagagtcccatgat
ggggaagaccttcctgagtccctggctgaatgtgaaaaacgtaacatcacaagatatgcc
atcgctgtattaggtcactacatccgcagacagcaggatccagagacctttatcaatgag
attaagtacattgccagtgacccagatgagaaatacttcttcaatgtgacggatgaagct
gctctaaatgacattgtagatgctttgggagatcgcatttttagtctagaggggaccctg
ggatacaatgaaagtgcctttctcatggagatgtctcagattggtttttcgacacacatt
ttggatgatggaatcttgtttggcatggtgggagcatatgactgggagggaggtgtcctg
aaggagagcaaagaagggcagcttattccctcacgagaggccttcgagaaagagttccct
ctggagctgaagaaccatgcagcctacctaggttacacagtgtcatcggtggttgttggt
gactggaggaggttgtatgttgctggtgcgcccagattcaagcacaaaggaaaggtcatc
ttgtttgacctcacccctgaaggagatgtcataatcacacaggccttaaatggagaacag
attggctcatattttggcagtgaggtgtgcgtggtggatgtggatcaggacggaataaca
gatatcctgctcatagctgctcccatgttcctgggagcaggaaacaaagaaacaggcaaa
gtctatatctactgtctggatggggatggttttgcacctaacggtacgctgcattctcag
aaggcacaggatgcacgctttggttatgctatggctgtagccaatgacttaaaccatgat
ggatacgctgatctgctcgtgggagctccgctagaggatgaccaccagggagctctttac
atctaccacggcgacgaatactacatcataccacagtacaaacaacgtatcccaggctcc
gctctctctgcagggctgcagtattttggccgtagcttgagcgctctgctggatctggat
ggggatgagttactggatcttgctgtgggagcacagggcactgccgtcctactgaagtca
cgcagtatagtacagataaacgtcagcctgtccttccagccacactccataaatgtgatc
cagaagaactgccacaaggctggccgagactctgcatgccttaacgccacggtttgcttc
ttggccctgtctcgctctcctggctcttatggcacatattttgatatgcagatgggggcc
atgttggatgacagaaagatctcggctcgtgctctatttgactacaactcccagcggcag
accatgatgggcgtcagtgttcgtgtggggcagaccatgtgctacacgctaccatttcat
gtctttgatacagctgattacatccgaccaatcagcttcactttgcacttcaaaatcaat
gacactgagagcggcccagtactggacgaaggctggtcaacaacattcaagaagtctatc
ccattctacaaagactgtggggaggatgatgtatgtgtaactgatctggttttacaggcc
catatggacatttctggaacaaggcaacaaccatatgttttacgcagtcctcggcgtcgg
cttgcagtagaagtacagctacaaaaccaactggaaaatgcttataacactagtctcact
cttcattactccaaaaacctgcatttcagcagcctgagtatacgggaagacacccagttt
aagattgaatgcacggctctaagctcaaacagtcactcctgtaatgtcagttacccagtg
ttccgctctcagtcgaaggtgaaattcatgttggaatttgagttcagttgtacgtctctc
atcagtaaggtccagatgaggcttgttgcttccagtgacagtttggagaatgaaggcaca
ttgtcggacaacagtgttcagttacagagtattgtacagtatgagcctgatctcttcatc
acaagtgactccaacctaaaccgctatgaggtccatccgaccaggacagtgtcagagggg
acaggacctgagttcttcacacacttcactgtgcagaatctgggctgttacgccgtcaga
aatctggagctgagtgtcaatttgccctccgtggcttcaggagacagggttttcgcgact
gtggttgatgcattttctcataatgcttcaggtgtgaactgcagtatagtcagtgatctt
tcaaagttgaagtccagtcagagagatgtacgtccacttcaccctgaagacatgaagaaa
actgaactattgaattgcacttcctcatggtgtgtggaggtcgtgtgtcacatccagcag
ctactgaagggagagatagccttgatccgcatcaccaggagaatacatgacaacttcttc
agacaggccaagtttaaagcagtgacaatcgtgggctcttaccagctgtctgctcgggag
tccaatctgattacaatgggaaatgctgccctcttgagggagacagttttggaagtgctg
aaggggcgttcgatcccgatttctctctggattctgattggcagcatcattggaggactg
ctgcttcttgcactcttagtattcattctttggaagttggggttcttcacaaggatacag
aggaaggacgaggatgagaaggatgacaactga
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integrated database retrieval system
