Ctenopharyngodon idella (grass carp): 127496825 Help Entry 127496825         CDS       T08802                                  Name (RefSeq) SWI/SNF complex subunit SMARCC1   KO K11649   SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C Organism cide  Ctenopharyngodon idella (grass carp) Pathway cide03082   ATP-dependent chromatin remodeling Brite KEGG Orthology (KO) [BR:cide00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     127496825  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cide03021]     127496825    03036 Chromosome and associated proteins [BR:cide03036]     127496825 Transcription machinery [BR:cide03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      127496825 Chromosome and associated proteins [BR:cide03036]  Eukaryotic type   Chromatin remodeling factors    BAF complex     127496825    PBAF complex     127496825    GBAF(ncBAF) complex     127496825 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SWIRM-assoc_2 SWIRM-assoc_3 SWIRM SWIRM-assoc_1 Myb_DNA-binding Myb_DNA-bind_6 Chromo HEAT_GCN1 BRCT_2 BRCT Motif Other DBs NCBI-GeneID:  127496825 NCBI-ProteinID:  XP_051720617 LinkDB All DBs Position 16:complement(27890181..27913795) Genome browser AA seq 1100 aa AA seqDB search MATAATAAGGTGSGGPSAGQAGAGSSIGRKKDGGPSSKFWESSETVSQLETVRLWIGKHY KKYVQTDSPTSKTLAALVVQLLQFQEDAFGRRVSNPALTKLPAKIFLDFKPGGALCHILG SAYKFKSEQGWRRFDLQNPSRMDRNLEMFMTIEKTLVQNNSLTRPIVYIVSDVEQKQANK LKDIIKRHQGTITEDKSKATHIIYPSPAQLEEEEWLRPVMRKDKQVLVHWGNYPDSYDTW VSTSDVDGDVEDPPSSEKPWRVHAKWVIDTDAFNEWMNEEDYEVDENKKSVSFRQRIFPG EEVSSRTPDRKDRKSLVGGKKRRRSPSPPSTPAESRKKGKKGNPGAQWRRRGHQNDDEQD EDLTKDLEDPSPVPGMEEVTLPKNVNQKKDSENTPVKGGTVADLDDHEDDSVASGGKEDD EQGKTEVNRLIDSEDNVTEQTHHIIIPSYAAWFDYNSIHEIERRALPEFFNGKNKSKTPE IYLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAVMRVHAFLEQWGLVNYQVDAESRP LPMGPPPTPHFNVLADTPSGLVPLHHRPPQVPPAQQMLNFPEKGKDKPSDLQNFGLRTDI YSKKNPKGKGAAGGRDWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPI EDQYLESSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAAAAAKAALEEFSRVR EEVPTELVEAHVKKVQEAARSTGKVDPAFGLESSGIAGTAPEEPEKTEPTEPEKMETDSD SQQPDKAEAKDEAEKPSESAEKPTEAEKEKSETTEKSEPQEEEESEGGEPKTAEKDKEED METTEEGKEGEEEQEEGKKKLELDIGEGNIATAAAAALASAATKAKHLAAVEERKIKSLV ALLVETQMKKLEIKLRHFEELETIMDREKEALELQRQQLLTERQAFHMEQLKYAEMKARQ QMEQQAAAQQNAGGHHGPPPHGPPPGMHPGHPGHPGHPGPGYPPMHHAMGPHHAPQTGPM VGPGQPMPGQPMPGRMMPGPPPVGPPQSGMPPMMGPRHPGPPNGMYPGPPPPTAQPDGMP PGPVGPPAPAPAPPPRAAEN NT seq 3303 nt NT seq  +upstreamnt  +downstreamnt atggcgacagcggcgactgcagcgggcggaacgggctccggaggaccatcggccggccaa gcgggagccggttcctcaattggacggaaaaaagacggagggccgtcttccaaattttgg gagagctcggaaacggtgtctcagttggagacagttcggctgtggatcgggaaacattat aagaagtatgtccaaaccgactctcctacaagcaaaactttggctgcgctggtggtgcag ttgctgcagtttcaggaggatgcatttgggcgtagggtcagcaatcctgcccttaccaag ctacctgcaaagatctttctggactttaaacctggaggagccctttgccacattctaggt tctgcatacaagttcaaaagcgagcagggctggaggaggtttgatctgcagaacccatcc agaatggatagaaatttggagatgttcatgactattgagaagactcttgttcagaacaac tctttgacccgaccaattgtgtacattgtgtctgacgtagagcaaaagcaagccaataag ctcaaagacatcattaaaagacatcagggaaccatcactgaagataagtcaaaggccact catattatttacccctccccagcccagctggaagaagaggaatggctgcgtcctgtcatg cgcaaagacaagcaggtgctggttcactggggcaactaccctgacagttatgacacatgg gtatcaacaagtgatgtggatggagatgttgaggatccaccaagttctgagaaaccatgg agggtgcatgctaaatgggtcatcgacacagatgctttcaatgagtggatgaatgaggaa gattacgaagtggatgagaacaagaagtctgtgagtttccgccagcggatctttccaggg gaagaagtgtcttcccgtacacccgatcgcaaggaccgcaagtccctggttggtggcaag aagaggagacgctctccatccccacccagcacccctgcggagtctcgaaaaaagggcaag aaagggaatcctggagcacagtggaggcgccgtggacatcaaaatgatgacgagcaggat gaagacctcacaaaggacctggaagatccctcccctgtgccaggaatggaagaagttaca ttgccaaaaaatgtcaatcagaaaaaggacagtgagaacacaccagtgaagggtggaact gttgcagatttggatgaccatgaagatgattcagtagcgtctggtggcaaggaggatgat gaacagggcaaaacagaggtcaatcgtctgatcgactctgaggacaatgtgactgagcaa acccatcacatcattatccccagctatgctgcctggtttgactacaacagtatacacgaa attgagagacgtgccctgccagagttctttaatggcaaaaacaaatctaagactccagag atatatctggcttatcgtaacttcatgattgacacataccggctgaatcctcaggagtac ctgacctccacctcctgcaggaggaacctcactggagatgtgtgtgcggtcatgagagtt catgccttcttggagcagtgggggctggtaaactaccaggttgatgctgagagcagaccc ctaccaatgggccctccaccaacgccacatttcaacgttctagctgatactccctctggt ttggtgccgctgcaccaccgccccccacaggttccccctgctcagcagatgctgaacttc ccagaaaagggcaaagacaagccaagtgacttgcagaactttggcctccgtacagatatt tactcaaagaagaatcccaagggtaaaggggctgcaggtggcagagactggactgagcaa gaaacattgcttctgttggaggctctggagatgtataaggatgattggaataaggtttcg gagcatgtcggaagccgtacacaagatgagtgcatcttgcacttcctgcggctacccata gaagatcaatacctggagagctctgaagcctcgctaggccctctagcttaccagccgatc cccttcagccaatcaggaaatcctgtcatgagcactgttgcgttcctcgcctctgtggtc gacccacgtgtggcggccgctgctgccaaagcagctctggaggagttctcccgtgtgcgt gaggaggttcccacggaactggtggaggctcatgtgaagaaggtgcaggaggccgcacgc agcacaggaaaagtggaccctgcgttcggcctggagagcagtggcattgctggcacagcc cctgaggagccagagaaaacagaacctacagagcctgagaagatggaaacagactcggac tcccagcagcctgataaggcggaggcgaaggatgaagctgagaagcccagtgagtctgca gaaaagcctacagaggcagagaaggaaaagagtgagactacagagaaatctgagccacag gaagaggaagagagtgaggggggagaacccaagacagcagagaaagacaaagaggaggac atggagaccacagaggaagggaaggagggtgaggaggagcaggaggaaggaaagaaaaag cttgagttggatatcggagagggcaacatcgccactgctgccgctgctgctctggcctct gctgccaccaaggcaaagcacctggctgcggtggaagagaggaagatcaaatctcttgtg gctctcctggtagaaactcagatgaagaagctggagatcaaactccgacactttgaggag ctggagaccatcatggaccgtgagaaggaagccctggagctccagaggcagcagcttttg acagagcgacaggcgttccacatggagcagctgaagtacgcggagatgaaggctcgtcag cagatggagcagcaggcagccgcacagcagaacgcaggaggacatcatggacctcctcca cacggcccacctcctggcatgcaccctggacacccaggacatcccgggcaccccggcccc ggatatccccccatgcaccacgccatgggtccccaccatgctcctcagacaggaccaatg gttggaccaggccagcccatgccaggtcaaccaatgccaggccgaatgatgcctggacct cccccagttggacccccacaaagtggcatgccccccatgatgggacctcgacaccctgga ccacccaacggcatgtacccaggtcctccacctccaaccgcacagcctgatgggatgccc cctggcccagtgggacctcctgcacctgcgcccgcgcccccccctcgtgctgctgaaaat taa

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