Ctenopharyngodon idella (grass carp): 127496826
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Entry
127496826 CDS
T08802
Name
(RefSeq) thrombospondin-3a
KO
K04659
thrombospondin 2/3/4/5
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04145
Phagosome
cide04510
Focal adhesion
cide04512
ECM-receptor interaction
cide04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127496826
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127496826
09144 Cellular community - eukaryotes
04510 Focal adhesion
127496826
09142 Cell motility
04820 Cytoskeleton in muscle cells
127496826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127496826
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cide04147
]
127496826
00536 Glycosaminoglycan binding proteins [BR:
cide00536
]
127496826
Membrane trafficking [BR:
cide04131
]
Endocytosis
Phagocytosis
Opsonins
127496826
Exosome [BR:
cide04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127496826
Exosomal proteins of colorectal cancer cells
127496826
Exosomal proteins of bladder cancer cells
127496826
Glycosaminoglycan binding proteins [BR:
cide00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127496826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF_MSP1_1
cEGF
EGF_LMN_ATRN
EGF
Motif
Other DBs
NCBI-GeneID:
127496826
NCBI-ProteinID:
XP_051720618
LinkDB
All DBs
Position
16:complement(28210997..28228911)
Genome browser
AA seq
957 aa
AA seq
DB search
MKVWVSLFVLMFVRSTESAQKQDVPVIDMLSLEDVKQTVAAVEKVSLALKTLSDVYVMST
FRLPPKLGGVLLGLYNKQDNKKYLEVAIMSKINKVLVRYVREDGKLHTVNLQSPNVADGR
PQSVILRVGGLRRDYLSLELYVNCRLADSAQRLPSLTSLPRDTELVEIRNGYKAYARMQG
SVESLKLALGGTVAQAGALTDCPFQGDASSYNIVNGEVNSILGDHTKALIGQLIIFNQIL
GELREDIREQVKEMSLVRNAILECQMCGFHEPRSHCQPNPCFKGVACMETFDFPGYSCGP
CPEGMTGNGTHCKDIDECAEAQPCYTPSACVNTAKGFTCESCPPGLWGPPLSGVGVEHAK
SHRQECSDIDECLDLANACTPNSICINTIGSYRCGQCKVGYVGNQTAGCFPRNSCASLSF
NPCDTNAHCIIQRNGDVTCACNVGWAGNGHTCGKDTDIDGYPDRSLPCMDNDKHCKQDNC
VFTPNSGQEDADNDGIGDQCDEDADGDGIKNVEDNCRLVSNKDQQNSDTDSFGDACDNCP
TVPNIDQKDTDNNGEGDACDEDIDGDGIQNVLDNCPKVPNPMQTDRDRDGVGDACDSCPE
ISNPMQTDVDNDLVGDVCDTNQDTDGDGHQDTRDNCPDIPNSSQLDSDNDGIGDDCDEDD
DNDGIPDNYAINGMGPDNCRLISNPNQKDSDSNGVGDVCENDFDNDAVLDFIDVCPESAE
VTLTDFRAYQTVILDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGT
FHVNTVTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQSVPFRAMAEPSLQLKAVKSRTG
PGEFLRNALWHTGHTDGEVKLLWKDPRNVGWQDKTSYRWQLSHRPQVGYIRVKLYEGTEM
VADSNVVIDTSMRGGRLGVFCFSQENIIWSNLRYRCNDTVPEDFSSHRKQVLMHIKV
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtttgggtcagtctattcgtgttgatgttcgtccggtccacagagagcgcacag
aaacaagacgtgccggtgatagacatgttgagtttggaggatgtgaagcagaccgtggcc
gcagtagagaaggtctctttagctttaaagactctcagtgatgtgtatgtgatgtctacg
ttccgtctgcctcctaaactgggtggagttctgctgggcctctacaacaagcaggataac
aagaaatacctggaggttgccatcatgagcaagattaacaaagttctggtccggtatgtt
cgtgaagacgggaagctgcacacagtaaacctgcagagccccaatgtggcagacggacgg
cctcagtctgttattctacgagtcggtggcctgcgcagagactacctgagcctcgagctc
tatgtgaactgccgtctggccgactccgcccagcggctgccttcattgacctctttgccc
agagacactgagctggtggagatacgtaatggctacaaggcatacgctcggatgcagggt
tcagtggagtcccttaaactggcactaggtggcactgttgcccaggctggagctctcacc
gactgcccctttcagggagacgcctcttcttataacatagtgaacggtgaggttaattct
attcttggtgaccacactaaagctctgattggccagctgatcatctttaatcagattttg
ggagagctgagagaggacatcagagaacaggtgaaagaaatgtctctcgtcaggaacgct
attctggagtgccagatgtgtggatttcatgagccacgttcgcactgtcagcccaatcct
tgctttaagggcgtggcctgcatggagacatttgattttccagggtacagctgtggcccc
tgtccggagggaatgacagggaatggcacacactgtaaggatatagatgagtgtgcagag
gctcagccgtgttatacaccaagcgcatgtgtcaacacagcaaaaggttttacctgtgag
tcctgcccacccgggctatggggtccacctctctctggagtcggtgtggaacatgctaag
agtcaccgccaggaatgctctgacattgatgaatgtcttgatttggccaacgcctgcaca
cccaactccatctgcatcaacaccattggatcatatcgatgcggtcagtgcaaagttgga
tatgttgggaatcagacagctggatgttttcctcggaattcgtgcgcttcgctcagtttc
aacccctgtgacactaacgctcactgcatcattcagcggaacggcgacgtcacctgtgct
tgtaatgttggatgggctggtaatggtcacacttgtgggaaggacacagatattgacggc
tatccagaccgctccttgccctgcatggacaacgacaaacactgcaaacaggacaactgc
gtcttcacacccaactccggtcaggaggatgcagataacgatgggattggagaccagtgt
gatgaggatgctgatggagacggaataaagaacgtagaggataactgtcggttggtgtcc
aataaagatcagcagaactctgacacagattcattcggtgacgcatgcgataactgtccc
accgttcccaacatcgaccagaaagatactgacaataacggagagggagacgcttgcgat
gaagacattgatggagatggaatccagaatgtgctggataactgtcccaaagtgccgaac
ccaatgcaaacagaccgggacagagacggagtgggtgatgcatgtgacagctgtcctgag
atcagcaaccccatgcagacagatgtggacaatgacttagtcggggatgtttgtgacaca
aaccaagacactgatggagacggacaccaggacactcgagataactgccccgacattcca
aacagctctcaactggactcggataacgatggcatcggagatgactgtgacgaagacgat
gataacgacgggatcccggacaattatgccatcaacggcatgggacccgataactgcaga
ctcatttccaaccccaaccagaaagactcggacagtaacggagtcggtgacgtatgtgag
aatgactttgacaatgatgcggtactagattttattgacgtgtgcccagaaagtgctgaa
gtcacactcacagatttcagagcctatcagacggtcattctagacccggagggtgacgct
cagatcgacccgaactgggtggtgctcaatcagggtatggagattgttcaaaccatgaac
agcgacccgggcttggcagtgggttacacagcgtttaacggtgtggacttcgagggaacg
tttcacgttaacacagtgactgatgacgactacgctggcttcatcttcggctatcaggat
tcatctagtttctatgtagtgatgtggaagcagaccgaacagacttactggcagtcggtc
cctttcagggccatggctgaaccaagcctgcagctcaaggcagtgaagtctcgtacaggc
cccggtgaatttcttcgtaatgctctgtggcacacggggcatacggatggagaggtgaaa
ctgctgtggaaagacccacgaaatgttggctggcaagataaaacctcgtaccggtggcag
ctcagccaccggccacaggtcggctacatcagggtgaagctgtatgaaggcacagagatg
gtggctgactcaaatgttgtgattgacacctccatgagagggggccgcctgggcgtgttc
tgcttctctcaagagaacatcatttggtccaatctgcgctaccgctgtaacgatactgtt
ccagaggacttcagttcacaccgtaaacaggttctaatgcacataaaggtgtga
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integrated database retrieval system
