Ctenopharyngodon idella (grass carp): 127496920
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Entry
127496920 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: prolactin regulatory element-binding protein
KO
K14003
prolactin regulatory element-binding protein
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127496920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127496920
Membrane trafficking [BR:
cide04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
127496920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_TEP1_2nd
PEP5_VPS11_N
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
VPS11_N
Motif
Other DBs
NCBI-GeneID:
127496920
NCBI-ProteinID:
XP_051720863
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All DBs
Position
16:3760664..3771105
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AA seq
429 aa
AA seq
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MGKRRAPELYRAPFPLYTVKIDPKTGLIITAGGGGASKTGIKNGVHFLSLELVGGVHSAT
LLHTHETDTRATMSMCLGGDVIAAGQDGSCSLMKFSHHQAKQAKKPAAKDGAGDKGAARK
RGGKGQNGDGGGGGGGGDVPQMKQESPQISVEDVGAVQGDLSPQDPCVKCVRFSADLTLL
LSGGADGYVRVWEFPSLKEKLNFKAHEDELEDIDISPDKKHIVTIGRDFACSVWSGDQLA
VGLCWHESMPQITEKTYRYKACRFAKVEDQKDALRLYTIQIPHKRERKPPQCYITKWDGA
LFLPLLTKPCGNEVISCLAVSDSGTFLGLGTVTGSVAIYIAFSLQQLYYIQESHGIVVTD
LTFLPDAPKIKAIKGDNEVVMLSVAVDSRCQMHAVSNRRSFPLWLVLFFCGLMVVGVILL
LQSLFPGFI
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaacgaagagcgcctgagctgtacagagcccccttccctctctatactgttaaa
atcgaccccaagaccgggctgatcatcacagctggaggaggaggcgcgtccaagaccggg
atcaagaatggagtgcatttcctgagtctggagctggtcggcggtgtgcacagcgccacc
ttgctgcacactcatgaaacggacacacgagccaccatgagcatgtgtctgggtggggat
gtgatcgctgcgggacaggacggcagctgcagcttgatgaagttcagtcatcatcaggcc
aaacaggcaaagaaacctgcagctaaagatggggctggagataaaggtgcagccaggaag
agaggcgggaaaggccagaacggagatggaggaggaggaggaggaggaggagacgttccc
cagatgaagcaggagtctcctcagatctcagtggaggatgttggtgcggtgcagggagac
ctcagcccacaggacccctgcgtgaagtgtgtgcgcttcagcgctgacctcacgcttctg
ctgagcggaggggccgacggttacgtcagagtgtgggagttcccctctttgaaagagaag
ttgaactttaaagctcacgaagatgaactggaggatatagacatcagtcctgataaaaag
cacattgtaacgattgggcgtgatttcgcgtgcagcgtgtggagcggcgatcagctggcc
gtgggtttgtgttggcatgaaagcatgcctcagatcactgagaagacataccgctacaag
gcatgcaggtttgcaaaagtagaggatcagaaagatgctttaagactctacacgatccaa
atccctcacaaacgggagcgaaaacccccacaatgctacatcaccaaatgggacggagcg
cttttcctgccgctgctcacgaagccttgtggaaatgaagttatatcttgtcttgcagtg
agtgactcgggaacatttcttggtcttggaactgtgacgggatctgtggccatctatata
gcgttttccctgcagcaattgtactacatccaggaatctcatggcattgtcgtcacagac
ctgacgttcttacctgacgctcctaaaattaaagccataaagggggataatgaagtcgtc
atgttgagcgtagctgtcgacagccgctgtcagatgcatgcggtgtccaaccgaagatcg
ttcccgctgtggctggtgctgttcttctgtggtctgatggtggtcggagttattctgctc
ctgcagtctctcttcccaggattcatttag
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