KEGG   Ctenopharyngodon idella (grass carp): 127496981
Entry
127496981         CDS       T08802                                 
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
cide  Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:cide00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cide03400]
    127496981
DNA repair and recombination proteins [BR:cide03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    127496981
SSDB
Motif
Pfam: BRCT_2 BRCT RTT107_BRCT_5 PTCB-BRCT FHA BRCT_3
Other DBs
NCBI-GeneID: 127496981
NCBI-ProteinID: XP_051720993
LinkDB
Position
16:complement(16258804..16267022)
AA seq 1921 aa
MDATQQIEDPFSEEEDQEEEKKEGGPEREQLATLKVFKNDHIPEAEFPLYVGDNVLGRDP
AVCSVLLPARSVSGRHAVISISVIRSSSSCSGNGAAVEALLWDMGSLNGTRKGRFKLTPQ
VRYALTEGESVVIADVPCQYIGLNISNRDTHKTPEKEVSKKEKKEGSPLSSSDSKLRKGV
RNGLNEKERSAFPPVPLWSSEDEEPKMCSPQPANKQPEITLVPESDSDGESATDERKDFV
SDSASSSHLCSSTNSSFLTPAKKVIPESEDESSITPSSASMDRFRLRETSGEPCSNSSKP
GLLALNLESDTDFEEADMEKSKTEPEVQPKLSAKVEPVPSAEFNMDSDTDVEGEEPETSK
AEPEAQEAVTLEKSISSVGLHMDSDTDVEEEEEKSKTEPEAQIEQAPKVGPVASAEFHMD
SDTDVEEEEPVAIKAKPEAQNAVTLDKSVSSVGHHMDSDTDVEEKEEESKTEAKAHTEEA
PKVKSVPTADLQMDSDTDVEENEAPITENISEKKAEVLAVTESTSSAPPHTEFNMDSDTD
VEDDNPIKVSMVTEVSHPIGEGSDVRPTSTPGSELHMDSDTDVDEENEDKEKVKARDFLS
NSETDDEDPFKPVLDKAVKVAESPKASVGGKAEQSKESTHKKQDHHSQAKTCLEEPTQAF
GHFEDWDLPSTQAYGAVGASAKFKPKQLDLEATQAYGTETDREEEPEEQLSHTQPYSNLS
TAETQLIPVAKTYDYDDDEEEDEEPPNDSHLSTADTVIIASTPRREEQTQPFSLFTAQMQ
HIWEGEDKEFYQSEPTQLMEADTINETQEGEEENMKRGRRIHGGGKVHKGKNSSSYLVIA
ETQPMCEEEEATDADLSRDSFQKPSTRQQAEKYDSAHLDENNSSSHVIIAETQPMSGDEA
PPDQDNVVSSIHTEKPTRSIITIAETQPMFEEDQAPEDDLNEVSRRQTDKGDPIQQTEKA
STSNLAIPETHVGEDDEGQEKELSSKMPSRRSRRGRPKKEKEAPQPAEDVVHHTITETQL
MCEEEQALDEDMKSEINTGVPSTGQQTDEFRSPELAETDLKSRVTIAETQCVSEEAPCDD
LTNAVSTSQIDEHSSTELPKPSSSHFIIAETQPMHEEDEGQEDYLSSKTSSRRSRRGKPK
KDEVPQTSEVAVHHTITETQPVPEEVIERDEDLSSGVKSRRSRRGRPIKEDSIPQPAEAA
ITSLSTSTETQPVCEDGTGRDEDLNIIISKRPRRGRKKDESEPAPSVGPNSDVIVVEAQP
MCEENAQEEPSGRSSRRHRKDKTEVESETPAPGKVQGKTRKGQEGKRKRGKALSEDEGES
EEEKTTRRGARRTGMKQKCSEKEEEERNAQAEKERMEKELQEQEERERIEKKRLEHERKE
QEERERAETVMRQKLEREQKELEEKERLKREEEEKMRKENERIQREKDRLEREEKERLER
ESREREEQRQKEEERIQMEKEQKEKERLAAERERLEKEKQENEELQMRAKGEKETKKNEQ
LEKDKTELETPLVPPARRTRRCSSSSMNSDQSVSSQQEPSIQRGRGRGRGRGRGRQTTNE
QPISARQSSRRGLAIAVEDTEQDPNSTTRSRSRSSSRSSERSANSVVTSNQGTRGRGRGR
KSVKLPEPQEVSQAKTSGKGRGRGGRLSGVENVNAGMTNEREQDAERVDDTAVPQTNSRG
RKRAANTSTSTEEAPSPTPKTPRRSVSSQAHKVLFTGLTDEDGERAVSRLGGSLARGVND
MTHLVTDKARRTVKFLCAVARGVPIVTPDWLKKCGKAGHFLSADEYILKDVEQEKKFSFS
LQKALQTAQSQPLLKGYEIHVTPSVMPEPSQMKEIITCCGARFLPKMPSAHKEHTVVVSC
EQDRALCQKAVNMSLPVVSTEFLLTGILQQRVDLQAYSLTSSLDTSNQPAAPKAAAKGRR
K
NT seq 5766 nt   +upstreamnt  +downstreamnt
atggatgccactcagcagattgaggatccattctctgaagaagaagatcaggaagaggag
aagaaagaaggaggaccagaaagagaacagttggcaacactgaaagtgtttaaaaatgac
cacataccagaggcagaattccctctctacgtcggagacaatgttttgggtcgtgatcct
gctgtctgttctgttctgcttccggctcgatctgtgtccggtcggcatgctgtcatctcc
atctcagtgatccgctcaagcagcagctgctctggtaacggtgctgctgtggaagcactt
ttatgggacatgggcagtttgaatggaactagaaaaggcagattcaagctgacgcctcag
gtacgatatgctttgaccgagggagagagtgtggtgatcgctgacgtgccatgtcagtac
attggtctgaacatctcaaacagagatacacacaaaactccagagaaagaagtgtccaaa
aaggaaaaaaaggaaggttcgccactatcgagcagtgactcaaagttgaggaaaggtgtg
cggaatgggttgaatgagaaagagaggagtgcctttccccctgtgcctttatggagctct
gaggatgaagaacccaaaatgtgttcaccacagccagctaacaaacagcctgagatcacc
ctggtgcctgagtcagactcagatggagagagtgctacggatgagaggaaagattttgtt
tcagactcagcatcctcctctcatctgtgtagttccacaaattcatcattcctgacccct
gcaaaaaaagtaattccagagagtgaggatgagagctccatcactccatcttcagcctca
atggaccggttcagactgagggaaacctccggtgaaccgtgttcaaactcatctaagcct
ggcctgctagctctcaacttggaaagtgacactgattttgaggaagcagacatggagaaa
agcaagactgaaccagaggtccagcctaaattatctgcaaaggtggaaccagtaccttca
gctgaatttaatatggacagtgatactgatgttgagggagaggagccggagacaagtaag
gctgaaccagaggctcaggaagcagtaactctagagaaatctatatcttcagttggtctt
catatggacagtgatactgatgttgaagaagaggaagaaaaaagcaaaactgaaccagag
gcgcagatagaacaagctccaaaggtgggaccagtagcttcagctgaatttcatatggac
agtgatactgatgttgaggaagaggagccagtggcaattaaggctaaaccagaggctcaa
aatgcggtaactcttgataaatctgtatcctcagttggacatcatatggacagtgatact
gatgttgaagaaaaggaagaggaaagcaagactgaagcaaaggctcatactgaagaagct
ccaaaggtgaaatcagtacctacagccgatcttcaaatggacagtgatactgatgtggag
gagaatgaggctcctataactgaaaatatctccgaaaagaaagcagaagttttagcagtt
actgaaagcacttcatccgcaccaccacatacagaattcaacatggacagtgacactgat
gttgaagatgacaatcccataaaggtttccatggtgacagaggtttcacatcccattgga
gagggaagtgatgtcagacctacatcaactccagggtcagagctccacatggacagcgac
acagatgtagatgaagaaaatgaggacaaggagaaggtgaaggccagagattttctgtca
aacagtgaaacagacgatgaggatccttttaaacctgtactagacaaagctgtgaaggtt
gcagagagtcccaaggcttctgtgggtggcaaagcagagcagtcaaaagagagtacccat
aaaaaacaagaccatcattctcaagcaaagacttgtcttgaggaaccaacccaagctttt
ggtcactttgaagactgggacctgccgtccacacaagcatacggagctgttggggccagt
gctaagttcaagccaaagcagcttgatcttgaggctacgcaggcatatggaacagagaca
gacagagaggaagaaccggaggagcaactgagccatacccaaccctactccaacctctcc
actgctgaaactcagctcattcctgtagcaaagacttatgattatgatgatgatgaggag
gaagatgaagaaccacccaatgactctcacctttccacagcagacactgtaatcatcgcc
agcaccccaagacgagaagagcagacacagcccttctctctcttcacagcccaaatgcaa
cacatctgggagggagaagacaaagagttttatcagagtgagcccacccagctcatggag
gcagacaccatcaatgaaacgcaagaaggtgaggaggagaacatgaaacgaggtaggaga
atccatggtggaggaaaagtacacaaaggtaaaaactccagctcttatcttgtcattgca
gaaactcagcccatgtgtgaggaagaagaagcaacagatgccgatctgagtagggacagc
tttcagaaaccaagtaccagacaacaggccgaaaaatatgattctgcgcatcttgatgaa
aacaactctagctcccatgtcatcatagctgaaacacaaccaatgagtggtgatgaagca
ccaccagatcaggacaatgtggtcagcagtattcatacagaaaaacctaccaggtccatt
atcaccatcgctgaaacgcaaccaatgtttgaggaagaccaagcaccagaggatgatctg
aacgaggtcagcagaagacagaccgacaaaggcgaccccatacaacaaactgaaaaagcc
tccacttccaatcttgccatccctgaaacacatgttggtgaagatgatgagggacaggag
aaagagcttagcagcaagatgcctagcagaagatcacgccggggtagaccaaaaaaagaa
aaggaagccccacaacctgctgaggatgttgtccatcacactatcacagaaacgcaacta
atgtgtgaggaggaacaagcactggatgaagatatgaagagtgagatcaacacaggggta
ccaagtacagggcaacaaacagatgaattcagatctccagagcttgctgaaacagacttg
aaatcccgtgtcactatcgctgaaacgcagtgtgtttcagaggaggcaccatgtgatgat
ctgactaatgcagttagcaccagccagatagatgaacacagctccacagaactcccaaaa
ccctccagctcccatttcattatagctgaaacacagcctatgcatgaggaagatgaagga
caggaggattacctcagcagtaaaacatcaagcagaagatcacgcaggggaaaaccaaag
aaagacgaggttccacaaacttctgaggttgctgttcatcacactatcacagaaacccaa
ccagttcctgaggaagtgattgaaagagatgaagatctgagcagtggagtcaaatccagg
agatcccgcagaggaagaccgataaaagaggacagcattccacaacctgctgaagctgcc
atcacttccctttccactagcacagaaacacagcctgtttgtgaggatggaactggaagg
gatgaagatctgaatatcatcatatccaaaagacctcgcagaggaagaaaaaaagatgaa
agtgaacctgcaccgtctgttggaccaaactctgatgtcattgttgttgaagcacagccc
atgtgtgaggaaaatgctcaagaagaacctagtggcagaagtagcaggagacataggaaa
gacaagacagaggtggaaagtgagacacctgcacctggtaaagtccaaggtaaaaccaga
aaagggcaggaagggaaaagaaagagggggaaagcattgtctgaggatgagggagagagt
gaagaggaaaaaaccacgaggagaggagccagaagaacaggtatgaaacagaagtgtagt
gaaaaggaagaagaggagaggaatgcccaagcagagaaagagaggatggagaaagagctc
caagaacaggaggagcgagagaggatagaaaagaagagactggagcatgagagaaaggaa
caagaagagagagagagggctgaaaccgtaatgagacaaaaactggaaagagagcagaag
gaattagaggaaaaagaacgactgaaaagggaagaagaggaaaaaatgagaaaagaaaat
gagagaatacagagggaaaaagatcgtttagaaagagaagagaaagaaaggttggagaga
gagagtagagaacgagaagaacaaagacaaaaagaagaggaaagaattcaaatggagaag
gaacaaaaagagaaggaaagattggcggcagagagagaaaggttagaaaaggagaaacaa
gaaaatgaggagcttcagatgagagcaaaaggagaaaaagagaccaaaaagaatgagcaa
ttggagaaggacaaaacagaattggaaactccacttgttcctccagccaggcgaacacga
cgttgttcaagctcatctatgaactcggatcaatctgtatcctctcaacaggagccatcc
attcagaggggccgagggcgaggcaggggacggggcagaggaagacagacaactaatgag
caaccaatcagtgctagacagtctagccggagaggactagctattgcagtcgaagacaca
gagcaggaccccaattcaacaacccgttcccgatcccgctccagttctagaagttctgag
agatctgctaatagtgttgtaacgtcgaatcaagggacgagaggaagaggcagaggcagg
aagagtgttaaactaccagaaccgcaggaagtttcccaagctaaaacttccggaaaaggc
aggggaagaggaggcaggctttctggtgtggagaatgtaaatgccggaatgaccaatgag
cgtgaacaagatgcagagagagtagatgacactgctgtaccccaaaccaacagcagaggt
cgcaagagagcagccaacactagcacatccacagaagaggctccatcacccacacccaag
actccaaggcgctctgtgtccagtcaggcgcacaaggtgttattcactgggttgacggat
gaggatggagaaagagcggtctcccgtttgggtggaagtctggcaagaggggtgaacgat
atgactcacctggtgactgataaggcaagacgcactgtgaagtttttgtgcgctgttgcc
agaggggtgccgatcgtgactcctgattggctaaagaagtgtggaaaagctggccatttt
ctttctgctgatgaatatatattgaaagacgttgagcaggagaagaagtttagtttcagc
ctacagaaggcactgcaaactgctcaaagtcaacctcttttaaagggttatgagattcac
gtaaccccatctgtgatgccagaaccatctcaaatgaaagaaatcatcacctgctgtggt
gcacgtttcctccctaaaatgccctcagctcacaaggagcacactgtggtggtgtcatgt
gaacaggacagggcgctttgtcagaaggcagtgaatatgtcattgcccgtggtcagcaca
gagttcctattgactggcattctgcagcagagagttgacctgcaggcctattctctcact
tcctctctcgacacatccaatcagcctgcagcccccaaagccgctgccaagggccgtagg
aagtag

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