Ctenopharyngodon idella (grass carp): 127497051
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Entry
127497051 CDS
T08802
Name
(RefSeq) transcription elongation factor A protein 3 isoform X1
KO
K03145
transcription elongation factor S-II
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cide03021
]
127497051
Transcription machinery [BR:
cide03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
127497051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
127497051
NCBI-ProteinID:
XP_051721102
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Position
16:complement(20548439..20560968)
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AA seq
705 aa
AA seq
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MTREEDLLRIAKKLDKMVSRNNMDGALDLLRELKNFNMTLKLLQDTRIGMSVNGIRKHCT
DEDVVNLAKILIKNWKKLLESAQNQKSEKTNENGSHPSKPSGSPNRTSPERDSSPRRLTT
EIKPDLDFNKKPDEKHRREKRDAELRNKKQESDQKKEKQSINNKKELERKDALNSDHLPS
QKTHSSPPPKCPLPSGEVKRESTTKCPTRKDAPVDFFPPASIIYHHPLRRSSVDVKKERK
DTLGSLQSLPLQSHPPKRPFIDGKKERKDAHELLFPLHHHPHPPLPPPPIPIPKRSSEVK
KERKDPSETLPPPAPVLSLPPPPKRPSLEEPKERAKKEIDPNAPLPPLPFHLHPPQKREM
KKERKETAAPSAPLPPVPLHLQPPTPTKRPSLDTNKDKEKERKDTSDPKRRTSEHNEKDR
KDTRHSKPLKRPSMKLKIERKDFTDSKKLHPRKLSIEGRRESKDSTDSKSSHHLLKRQSS
ETKLERRDSTSSRYGNSPQAKKYRECKSKPETPKTPTTPTSPLSPSLSSSVGPLSPRLQT
GDSIRDKCIEMLTAALRTDDDFKDYGANCEGMAAEIEDHIYQEIKATDMKYKNRVRSRIS
NLKDPKNPNLRKNVLAGAIELSRIATMTAEEMASDELKQLRNVLTQEAIREHQMAKTGGT
TTDLLQCGKCRKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgagaggaggacctgttgcggattgctaaaaaactagacaagatggtgtctaga
aataacatggacggagctctagatcttctgagagaattgaaaaatttcaacatgacactg
aagcttcttcaggatacaagaattggcatgtctgtcaacggaataagaaaacattgcaca
gatgaggatgttgtcaacttggcaaagattcttatcaaaaactggaagaagcttttagaa
tcagctcaaaaccaaaagtctgagaagacaaatgagaatggcagtcatccaagcaagcca
tcagggtcacccaacaggacttctcctgagagagactccagtccacgaaggttgacaacg
gaaattaaaccagacttagacttcaacaagaaacccgatgaaaaacacagaagagagaaa
cgagatgcagagctcaggaacaaaaaacaagaaagtgaccagaaaaaagagaaacaatct
attaacaataaaaaggagctagagaggaaagacgcattgaacagtgatcatcttccctcc
caaaagacgcattcgtctccgccccctaagtgtcctcttccatctggggaagtgaagagg
gagagcacaacaaaatgtccaacaaggaaagatgctcccgttgattttttccctcctgct
tcgatcatttatcaccatcctctaagacgctcatcagtagatgtaaagaaagagagaaaa
gacactctgggttctttacagtctcttcctcttcagtctcatccccctaagcgtcccttc
atagatggaaagaaagaaaggaaagacgcacatgaacttctttttcctcttcatcatcac
cctcatcctccacttcctcctcctcctattcctatccctaagcgctcatcagaagtgaag
aaagaaaggaaagatccttctgaaactttacctcctcctgctcctgtcctttctcttcct
cctcctcccaaacgtccatcactagaggagcccaaagaaagggcaaagaaagaaattgat
ccgaatgcccctcttcctcctttaccttttcatctacatcctcctcagaaacgagagatg
aagaaagaaagaaaagaaacagcggctcccagtgctcctctccctcctgttcctcttcat
cttcaacctcctacacctacaaaacgtccctcattagacacaaataaagacaaagagaaa
gaaagaaaagacacatcagacccgaagcgacggacgtctgaacacaatgagaaagataga
aaagacacaagacacagtaaaccactcaaaagaccatcaatgaagctcaagattgagaga
aaggacttcaccgattccaaaaagctccatcctagaaagctgagcatagaaggacggaga
gaaagtaaggactctaccgactccaagtcaagccatcaccttttaaaacgacaatcaagt
gaaactaaattggagaggagagattctactagctcaaggtatggcaactcacctcaggcc
aagaaatatagggaatgcaagagtaaaccagagaccccaaagacgcctacaacacccaca
agccccctctctccgtcgcttagctccagtgtgggtcctttatctcctcgtctgcaaacc
ggggattccatcagggacaaatgcattgaaatgctgactgctgccctacgtacagatgat
gactttaaagactatggggcaaactgtgagggcatggcagcggaaatagaggatcatatc
taccaggagataaaagccacagacatgaaatacaagaacagagtccgcagccgcataagt
aacctgaaggatcctaaaaatcccaatctgcgtaaaaatgtcttagctggagccatcgag
ttgagccgcatcgccaccatgactgctgaggaaatggctagtgatgaactgaaacagtta
aggaacgtgttgacccaggaggccattcgagaacatcagatggcaaagactggaggaacc
acaactgacctgctgcagtgtggcaagtgcaggaagaaaaactgcacctacaaccaggtg
caaacccggagtgctgatgaaccaatgaccacatttgtgttgtgcaatgaatgtggtaat
cgctggaagttctgttaa
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