Ctenopharyngodon idella (grass carp): 127497070
Help
Entry
127497070 CDS
T08802
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cide03400
]
127497070
Enzymes [BR:
cide01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
127497070
DNA repair and recombination proteins [BR:
cide03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
127497070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
127497070
NCBI-ProteinID:
XP_051721181
LinkDB
All DBs
Position
16:complement(1385223..1589440)
Genome browser
AA seq
2207 aa
AA seq
DB search
MSPPRLTGALRSFSTVSKQDDLTQDVYDLKTKRLKRQEIFARDGLTWQKIVQFFTQHLEK
KDQPAATHELKSILQAAKQIVGTDFGQDTIESAGVFLFKTFHNKDKIGHEETRAIKQMFG
PFPASAAELSCAAVGRLVAQIGESQVDAFIQTQSSLKTVNRGSVFGRNIAFSFDTYVLDA
HDTVPWSEGTDMDQAMDFHSLLNNHVGERRAGAERDDAYSAEELEQRNADGSILRQEVEK
YLNEGNMVSSSAEELSTSLFEMLASTKSDDELQNELFEFLGPQGFEMISMLLQRRSDIVD
ALVSIPSDCRPHFMSGKHKVARDESTKPIYGCQVIIQSEQERQMMKIYRKEEKKERKREK
RGDEGESCESAFHFDPMELRLQREQALLTARYSPVLGRHRDYERIRYPHVYDSYAEAIMT
SAFVGGAKMLLPEGIRRENNKMYEEVQIPPNEPMPIGFEEKPVYISELDEIGQLVFKGMK
RLNRIQSIVFETAYNTNENLLICAPTGAGKTNIAMLTVLHEIRQHLQPGGVIRKDQFKIV
YVAPMKALAAEMTNYFSKRLEPLGIVVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRK
SVGDVALSQIVRLLILDEVHLLHEDRGPVLESLVARTLRQVESTQSMIRILGLSATLPNY
LDVASFLHVNPFIGLFYFDSRFRPVPLGQSFVGIKTTNKVQQLHDMEEVCYEKVLEQIRA
GHQVMVFVHARNSTVRTAMSLIEMAKNRGELSFFQVTQGPDYGQCEKQVQRSRNKQMREM
FPDGFGIHHAGMLRQDRTLMENMFSRGYLKVLVCTATLAWGVNLPAHAVIIKGTNIYDAK
RGSLVDLGILDVMQIFGRAGRPQFDKYGEGTIITTHEKLSHYLTLLTQQNPIESQFLQSL
ADNLNAEIALGTVTNVDEAVRWMSYTYLYVRMRANPLVYGINHKAYQMDPQLELYRKELV
VESGRKLDKARMIRFDERTGYFASTDLGRTASHFYIKYNTIETFNELFNSQKTEADILSI
VSKAEEFEQIKVRDEELEELEKMLCDFCELPAAGGVENGYGKINILLQTYIGRGEVDSFS
LISDLSYVAQNAARIVRALFEIALRKRWPAMTYRLLNLCKVIDKRLWGWAHPLRQFSTLP
PSALSRMEEKKLTLDKLRDMGKDEIGHMLHHVNIGLKVKQCVHQIPSILMESSIQPITRT
VLRVRLSITPDFRWNDQVHGSVGEPWWLWVEDPINDHIYHSEYFLLQKKQVLSGEPQQVV
FTIPIFEPMPSQYYIRAVSDRWLGSEAVCIINFQHLILPERHPPHTELLDLQPLPVTALG
NREYESLYKFTHFNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAEMAIFRVFNVYPTSK
VVYIAPLKALVRERIEDWKIRIEEKLGRKVVELTGDVTPDMRAIAAADLIVTTPEKWDGV
SRSWQNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTSKSVRVVGLSTALA
NARDLADWLGIGQVGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPVFQAIRTHSP
AKPVLIFVSSRRQTRLTALDLIAFLATEDDPKQWLHQDEREMTDIISTARDSNLKLTLAF
GIGMHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIVKGTEYYDGKTHR
YVDYPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLSVLSDH
LNAEIAAGTIASKQDAMDYITWTYFFRRLVMNPSYYSLDDTSHETINKYLSNLVGRSLRD
LECSYCMEIQQDDHTIEPLTYGRIASYYYLKHQTIRMFKERLKPELPVQELLAVLSEAEE
YAELPVRHNEDQLNSELAQRLPLPVNPHSYDSAHTKTHLLMQAHFSRAQLPCSDYGTDTK
TALDNAIRICQAMLDVVANEGWLVSALSICNLVQMIIQARWLHDSSLLTLPHIEKQDLYV
FRRWSGRGTRGGRGFQGPIEGLPELIAACDGKEENFTSMVKEVLQPNQISQAWLYVSHLP
VVEVSLSVKGWWEGCEEQTERMLPSNVTNIRDESSWQPLHADQEYVLQVSLRRLNAGQQR
RKQDSRAQAPRFPKPKDEGWFLVLGEVEKKELLAIKRVGFIRNRSSVSVAFYTPEKTGRC
IYTLYLMSDSYLGLDQQYDLHLNIIPASIAAQVNSEISESTGRTGRQ
NT seq
6624 nt
NT seq
+upstream
nt +downstream
nt
atgtctccccctcggctcactggagccctgcgctccttttctaccgtcagcaagcaggat
gatttaacacaagatgtttatgatttgaagaccaagcgcctgaaacggcaggaaatattt
gcccgagacggtctaacatggcagaagattgttcagttcttcacacaacatctggagaag
aaggatcagccggcggccactcacgagttgaagagtatcctccaagcagccaaacagatc
gttggtacggattttgggcaggacaccattgaaagtgctggagtcttcttgtttaaaaca
ttccacaacaaagacaagatcggtcatgaggaaaccagggccataaaacagatgtttgga
ccttttccggcgtctgctgccgagttgtcttgtgcagctgtgggtcgtttagtggcccag
atcggagaatctcaggtggatgctttcatccaaacacagagttctctcaagacggtgaac
cgcggttctgtcttcggacggaacattgctttctcatttgacacgtatgtgctggatgct
cacgatactgtgccctggtcagaggggactgacatggatcaggccatggactttcacagc
ctcctaaataatcatgttggtgagcgaagggctggagctgagagagatgatgcttactca
gcggaagaactggagcagagaaacgcagacggatccatcctgagacaagaggtggagaaa
tacctgaacgagggaaatatggtatcgtccagtgccgaagagctctccacctctcttttt
gagatgcttgcctccacaaagagtgatgacgaactacaaaacgagctgtttgagtttcta
ggtcctcaggggtttgagatgatctccatgctcctccagagaaggtcagacatcgtggac
gctctggtgtccatcccgtcggattgccgacctcacttcatgtcaggaaagcataaagtg
gcgagagatgaatccaccaagcccatatacggctgccaggtgattatccagtccgagcag
gagaggcagatgatgaagatttacaggaaagaggagaagaaggagaggaaacgtgagaaa
cgaggagatgagggggaatcctgtgaaagcgcttttcattttgaccccatggagctgaga
ctgcagagggagcaggccttgctgacggcacgctattctccagtgttaggccgacacaga
gactatgagcggattcgttaccctcacgtttatgattcttatgctgaagccatcatgacc
tctgcattcgtcggaggagccaagatgctgctgcctgaggggatcagaagagagaataat
aagatgtatgaggaggttcagatcccccccaacgagcccatgcccattgggtttgaggag
aaacccgtgtacatctcggagttggacgagattggccagttggtgttcaagggcatgaaa
aggttaaacagaatccagtctatagtgttcgagacagcttacaacaccaatgaaaacctg
ctcatctgcgcacccaccggtgctggcaaaaccaacatcgccatgctcaccgtcctccac
gagatccgtcagcacctgcagcctgggggagtcatccgcaaggaccagtttaagattgta
tacgtagctcctatgaaggccctggctgctgagatgactaattacttcagtaagcgattg
gagcctctgggcatcgttgtcaaggagctgacgggagacatgcagctgaccaaaggagaa
atcctccgcactcagatgttggtgacgactccagagaagtgggatgtggtgaccaggaag
agtgtgggggacgtggctctgtctcagatcgtccgactgctcatcctggatgaagttcat
cttcttcatgaggacagagggcccgtgctggagagcctggtggcccggacgctgcgtcag
gtggagtcaacccagagtatgattcgcatacttggtctctctgcaacgctgccaaattac
ttggatgtggcgtctttcctgcatgtgaaccctttcattggattgttctactttgacagt
cgtttccgtcctgttccacttggccagagctttgttggcatcaagactacaaataaggtt
cagcagctgcatgacatggaggaggtttgttatgagaaagtcctggagcagatcagagcg
ggtcaccaggtgatggtgtttgtacatgcccgcaactctaccgttcgcaccgccatgagt
ctgatcgagatggccaagaaccggggagagctgtcttttttccaggtcacccagggtcca
gactacggccagtgtgagaaacaggtgcagcgctccagaaacaagcagatgagggagatg
tttcctgacggcttcgggatccatcacgccggaatgttacggcaggaccgcacgctgatg
gagaacatgttttccagaggatacttgaaggttctggtgtgcaccgccacgctggcctgg
ggtgttaacctgcccgctcacgccgtcatcatcaagggcactaatatctacgatgccaag
cgtggttcactggtggatctgggcatcctggacgtgatgcagatcttcggacgggccgga
cggccacagtttgacaagtacggtgagggaaccatcatcacaacccatgaaaagctgagc
cattacctgacgctgctgactcagcagaaccccatcgagagccagttcctgcagagcctc
gccgacaacctcaacgctgagatcgctctagggacggtcactaatgttgatgaagctgtc
cggtggatgagttacacgtacctgtatgtgcgaatgagagccaatccactcgtttacggc
atcaaccacaaggcctatcagatggacccgcagctggagctctacaggaaggagttagtc
gtggagtccggcaggaagctggataaggcgcggatgatccgttttgacgagaggactggt
tattttgcatccacagaccttggcaggacagccagtcacttctacataaagtacaacacc
attgagactttcaatgagcttttcaactcgcagaagaccgaagcagatattctgagcatt
gtttcaaaagctgaagaattcgagcagatcaaggttcgggacgaggagctggaggaactg
gagaagatgttgtgtgatttctgcgagctgccggcggccggaggagtggagaacggctac
ggcaagataaacatcctcctccagacgtacatcggccgcggggaggtggacagcttctcc
ctcatatctgacctgtcttacgtcgcgcagaatgctgctcgtatcgtgcgggctctgttt
gagatcgctctgaggaagcgctggccggccatgacctaccgcctgctgaacctgtgtaaa
gtgattgacaagcgtctgtggggctgggcccacccgctgcggcagttcagcacgcttccc
ccgtcagcgctgtccaggatggaggagaagaagctcacgttggacaaactcagagacatg
ggcaaagacgagatcggtcacatgttgcatcacgtgaacatcgggctgaaggtgaagcag
tgtgttcatcagataccctccatcctgatggagtccagcattcagccaatcacacgcact
gtcctgcgcgtacgcctcagcatcactccggacttcaggtggaatgaccaggtccatggc
tccgtgggagagccctggtggttatgggtggaggaccccatcaacgaccacatctaccac
tctgagtacttcctcctgcagaagaaacaggtgttgagtggagagccgcagcaggtggtc
ttcactatacccatctttgagcccatgccttctcagtattacatccgagccgtgtctgac
cgctggctgggctctgaagctgtgtgcatcatcaacttccagcacctcattctgcctgaa
agacacccgccacacacagagctcttggatcttcagccgttgcctgtgactgcattggga
aacagggagtatgagagtctctacaagttcacacactttaatcccattcagacgcagatc
ttccatacactctaccacacggacaccaacgtcctgctgggggcccccaccggctccgga
aaaaccatcgctgctgagatggccatcttcagggtcttcaacgtgtaccctacctccaag
gtggtctacattgctcctctcaaagctctagtccgagagaggattgaggactggaagatc
agaatagaagagaaacttgggaggaaggtggttgagttaacaggtgacgttactccagac
atgcgggccatagctgcagctgacctgatcgtcaccactccagagaaatgggatggagtc
agccgcagctggcagaaccgcagctatgtgcagaaagtggctattctcatcatagacgag
atccatcttctgggtgaggacagagggccggttctagaggtcattgtgtccagaaccaac
tttatctcatcacacacctcaaaatcagtcagagtggtgggactctctaccgcgctggct
aatgcacgggatctagccgactggctgggcatcggacaggtgggactgtttaatttccgg
ccctctgttcgcccagtgccgttggaggttcacatccagggctttccgggccaacactat
tgccctcgtatggccagcatgaacaaacctgtcttccaggccattcgcacacattctcca
gccaaaccggtcctcatatttgtgtcatcgcgccggcagacacggctcacggctctggac
ctcattgcatttctggctacagaagatgaccccaaacagtggctccaccaggatgagaga
gagatgaccgatatcatttccactgcgagagattcaaacctgaagctgaccctggcgttt
gggatcgggatgcatcacgcaggacttcacgagcgcgacaggaagacggtggaagagctc
tttgtcaactgtaagattcaggtgttaattgcaacgagcacactagcgtggggcgtcaac
ttccctgcgcacctggtgatcgtgaagggcacagaatactacgacggaaagacccaccgc
tacgtggattaccccataacagatgttcttcagatgatgggtcgagcaggacggccgcag
ttcgatgaccagggcaaggctgttatccttgtgcatgacatcaagaaggacttctataag
aagttcttgtacgagcccttccctgtggagtctagtcttctgagcgtgctctccgatcac
ttgaatgcagaaatcgcagcaggcacaatcgcttcaaagcaagacgccatggattacatc
acctggacgtacttcttccgcaggctggtcatgaaccccagctactatagtttggacgac
accagccatgaaaccattaacaaatacctttcaaacctggtggggaggagtctaagagac
ctggagtgttcctactgcatggaaatacagcaggacgatcacaccatcgagccgctgacg
tacggccgcattgcatcctactattacctgaaacaccagaccatccgcatgttcaaagag
cgtctgaagccagagctgcccgtccaagagctgctggccgtcctgtcggaagcagaggag
tacgccgagctccccgtacgtcacaacgaagaccagctgaacagtgagctggcccagcgg
ctgcccctaccggtcaaccctcactcctatgacagcgcacacaccaagacacacctgctg
atgcaggcccacttcagccgcgcacagctgccctgcagcgactacgggaccgacaccaag
accgcgctggacaacgccatccgcatctgccaggcgatgctggatgtggtggcgaatgaa
ggatggctcgtgtctgcgctcagcatttgcaacctcgtacagatgatcattcaggccaga
tggcttcacgattcctccctgctcacacttcctcacattgaaaagcaggatctctatgtc
ttcaggaggtggagcggcagaggtacgaggggcggacgtggctttcaaggaccaatcgag
gggcttcccgagctgatagccgcctgcgacgggaaagaggagaacttcacgtcgatggtg
aaggaggtgctgcagcccaatcagatctctcaggcatggctgtacgtgagtcacctgccc
gtggtggaggtcagtctgagcgtgaagggctggtgggagggctgcgaggagcagacggag
cgcatgctcccatctaacgtcaccaacatccgggacgagtccagctggcagccgctgcac
gccgatcaggagtacgtcctacaggtgtccctgcgccgcctcaacgccggccagcagaga
aggaagcaggacagcagggcacaggcgccgcgctttcccaaacctaaagacgaaggctgg
tttctggttctcggggaggttgagaaaaaagaactgctggctatcaaacgcgtgggattc
atacgcaaccgcagcagtgtgtccgtggccttctacacgccggagaagacgggaaggtgt
atctacacactgtacctgatgagcgacagctacctcggcctggatcagcagtacgacctc
catctgaacatcatcccggccagcatagctgcgcaggtcaacagtgaaatatcagagagc
acaggcagaacgggccggcagtga
DBGET
integrated database retrieval system
