Ctenopharyngodon idella (grass carp): 127497117
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Entry
127497117 CDS
T08802
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127497117
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cide01002
]
127497117
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cide03021
]
127497117
03036 Chromosome and associated proteins [BR:
cide03036
]
127497117
Peptidases and inhibitors [BR:
cide01002
]
Metallo peptidases
Family M1
127497117
Transcription machinery [BR:
cide03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127497117
Coactivators
SAGA/TFTC/STAGA complex
127497117
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
127497117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
Peptidase_M1_N
Peptidase_M1
SR-25
RPN2_C
Motif
Other DBs
NCBI-GeneID:
127497117
NCBI-ProteinID:
XP_051721266
LinkDB
All DBs
Position
16:complement(8338828..8411516)
Genome browser
AA seq
1197 aa
AA seq
DB search
MNRKKDKGFESPRPYKLTHQVVCINNINFQRKSVIGYVELTIFPTVMNLNRIKLNSKQCR
IYRVRVNDLEAPFIYNDPTLEVCHHESKQRNLNYFSSAYTAAVSAVDPDAGNGELSIKVP
SELWKQGDEMKVMKVYIEFSLDQPKGGLHFVVPDVEGSMAERAAHVFSFGNQNSTRFWFP
CVDSYSELCTWKLEFTVDASMVAVSCGDLVETVYTHDMRKKTYHYMLPIPTAAPNISLAV
GPFEILVDPYMHEVTHFCLPQLLPLLKHTMSYLHEIFEFYEEILTCRYPYSCFKTVFVDE
AYVQVSSYASMSIFSTNLLHSGMIIDQTPISRRFLAQALAQQFFGCFISRMSWSDEWVLK
GISGYIYGLYLKKTFGVNEYRHWIKEELDKIVDYELKMGGVLLHPTFSGGKEKDNPTPHL
HFSIRHPHTLSWEYYKMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKYQSH
MWSQMLVSTSGFLKSISNVSGKDIGPLIKQWVDQSGVVKFFGSFAFNRKRNVLELEIRQD
YTSSGTQKYVGPIKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGEE
VDMDLSAMDADSPLLWIRIDPDMSILRKVEFEQADFMWQYQLKFERDVVAQEEAISALEK
FPTPASRRALTDILEQDQCFYKVRMQACFCLAKIANSMMSTWTGPPAMKSLFTRMFCCKS
CPNIVKTNNFINFQSYFLQKTIPVAMALLRDVQNLCPKEVLNFILDLIKYNDNRKNKFSD
NYYRAELIDALTNSLTPAISINNEVRTVDNLNADVRLILEEITRFLNMEKLLPSYRNTIT
VSCLRAIRMLQKNGHIPSDPSLFKTYAQYGHFVDVRIAALEAVIDYTRVDRSSSELQWLL
DLVQNDPVHYIRHEILSMLAKNPPFTKAADSSLCNEALVDQLWKLMNSGTCHDWRLRCDA
VNLYYTLFGLTRPSCLPLPELGLVLNLKEKKAVLNPTIKSEQGPGGPEVTSNITFTSALE
EEHVIMEPALSGVAMAPQGLKRKAETPLGSSPEPGQVMQEEPSAKASVKSRFPTQEEEDI
DMDTVHDSQAFIYHHLNMLERPSTPGKEPSSVEQAILSMPGTPMPTLSKDSTSSKHGDHH
HHHHHHHEHKKKKKKHKHKHKHKHKHESKDKDKDRDSHAFSNSPASGRSIRSPSLSD
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcaagaaagacaagggctttgagagcccacgaccatataaactgacccatcag
gttgtctgcatcaacaacataaattttcagaggaagtctgtcattggttatgtggagctg
accatttttccaacagtgatgaacctgaaccgtattaaattgaacagcaaacagtgccgt
atctacagggtgagagtgaatgatcttgaagctccattcatttacaatgatcccacgctg
gaggtgtgccatcatgaatccaagcagaggaacctgaactatttctccagtgcttacaca
gcagcagttagtgctgtggatccagatgctgggaatggggagctttccattaaagttcct
tctgagctctggaaacagggagatgagatgaaagttatgaaagtttacattgaattctca
ttggatcaaccgaaaggagggttgcattttgtagtacctgatgtggaaggaagtatggca
gaaagagcagcccatgttttctcctttggcaaccagaattccacacggttctggtttcca
tgtgttgactcatactctgagttgtgcacatggaagctggagtttactgtggatgcctcc
atggtggcagtgtcctgtggggacctagtggagaccgtctacacccacgatatgcgcaag
aagacctaccactacatgctgcccatccccactgccgcccctaacatttccctggctgtg
gggcccttcgagattctggtggacccctacatgcatgaggtgactcatttttgcttgcct
cagcttctgcccctcctgaagcacactatgtcctacctgcatgagatttttgagttctac
gaggagattctcacctgtcgctacccatattcttgctttaagaccgtctttgtggatgag
gcttatgtgcaggtctcatcatatgcatcaatgagtattttcagtaccaacctcctgcac
agtggtatgatcatagatcagactcctataagcaggcgctttctggctcaagctctggcc
cagcagttttttggttgcttcatctctaggatgtcctggtctgatgagtgggttttgaag
ggaatttcaggatacatttatggcctctacctgaagaaaacatttggagtcaatgagtat
cgtcactggattaaggaggaactggacaagattgtggattatgagctaaaaatgggcggc
gtcctgctgcaccccaccttttctggaggaaaagaaaaagacaatccaactccccacctt
cacttttccatcagacacccccacacattgtcctgggaatattacaagatgttccaatgc
aaagcccacctggtcatgaggctcatcgaaaaccgaattagcatggaattcatgttgcag
gtgtttaacaagctcttgagtctggccagcacagcctcatctcagaaatatcagtctcac
atgtggagccagatgctggtatccacctctggattcctcaaatccatttccaacgtgtca
gggaaggacatcggacccctcatcaagcaatgggtagaccagagtggggtggtaaaattt
tttggaagttttgccttcaacaggaaaagaaatgttttggaactagagatccgtcaggac
tacacttcgtctggcacacagaaatatgtgggccctattaaagtgacagtacaggaattg
gatgggtcatttaaccacacattgcagatagaggagaacagtctaaaacatgacattccc
tgccactccaaaagcagaaggaacaagaagaagaaaatccctctgatgaatggagaagaa
gttgacatggacttgtcagccatggacgctgactctcctctgctgtggatccgaattgat
ccagacatgtccatccttcggaaggtagagtttgaacaggccgatttcatgtggcagtac
caactgaagttcgagagggatgtagtggcccaggaggaggctatttcagcgttggaaaaa
tttcccactcctgcatcacgacgtgctcttacggatatcctagaacaagaccagtgcttt
tataaagtccgcatgcaggcctgcttctgtctggctaagattgctaattccatgatgagc
acctggactggccccccagccatgaagtctctctttacacgcatgttctgctgcaaaagc
tgcccaaatatcgtcaagaccaacaacttcattaattttcagagctacttcctgcaaaag
actatacctgtggccatggctctgctaagagatgttcagaatctttgtcccaaagaggtc
ctgaactttatactggacctcatcaaatacaatgacaaccggaagaacaagttttctgat
aattattatcgtgccgagctgattgatgccctgacaaattcactgactcctgccatcagc
attaataatgaggtgcgcacagtggacaacttgaatgcagatgttcgcctgatcttggag
gaaatcacacgcttccttaacatggaaaaactgctgccaagctaccgtaacaccataaca
gtcagttgcttgcgggccattcgcatgctacaaaagaacggccacatccccagtgatccc
agcctgttcaagacctacgctcagtatggccactttgtggatgtgaggattgcagcactg
gaggctgtaatagactatacaagagttgataggagttccagtgaacttcagtggcttctg
gatctggtacaaaatgacccagttcattacataaggcatgaaattctcagcatgcttgcc
aagaatccacctttcaccaaagcagcggattcttcgttgtgtaacgaagctttagtggac
caactatggaagctgatgaactcaggtacctgtcatgattggcgtttgcgatgtgatgcc
gtaaatctgtactacactctgtttgggctgacccgaccctcctgtctgccgttgccagag
ttgggtctcgtgctgaacctgaaggagaaaaaagctgttctcaaccccaccatcaaatct
gagcagggccctggtggccctgaggtgacctcgaacattaccttcaccagcgctctggag
gaggagcatgttatcatggagccagcattgagtggtgtggccatggccccacagggttta
aagaggaaggcagagactccattaggttcatcccctgaacctggacaagttatgcaagag
gaacccagtgctaaagcatctgtgaagagcagatttcccacccaggaggaggaagatatt
gatatggacacagttcatgacagccaggcattcatctaccaccatctgaacatgttggaa
agaccttcaactccagggaaagaaccatcttcagtagagcaagccattttgtctatgcca
ggaacacccatgcccacattgagcaaagacagcacatcctccaaacatggagatcaccac
caccaccatcatcatcatcatgagcacaagaagaagaagaagaagcacaaacacaaacat
aaacacaaacacaagcatgagagtaaggacaaagataaagacagagattctcacgctttt
agtaacagccctgccagtggccgctccattcgttctccatctctatctgactga
DBGET
integrated database retrieval system
