Ctenopharyngodon idella (grass carp): 127497217
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Entry
127497217 CDS
T08802
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127497217
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
127497217
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
zf-CCCH
RuvA_C
Motif
Other DBs
NCBI-GeneID:
127497217
NCBI-ProteinID:
XP_051721509
LinkDB
All DBs
Position
16:3081335..3092111
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AA seq
578 aa
AA seq
DB search
MMQSRCYHQPTGLGQDRTDHLDLQMKVDFFRKLGYSPEEVKAALKKLGFGTDTNAVLGEL
VRSGAKAVPSSSSDSDDGGFSLPHRRGSSSRGQGSTLEDNSEPESDLKPIVIDGSNVAMS
HGNKEVFSCRGIELAVNYFLDRGHRNITVFVPSWRKEQPRPDVPISDQHILEELERKKFL
VFTPSRRIGGKRVVCYDDRFIVKLAHELDGIIVSNDTYRDLQSERPEWKRCIEERLLMYS
FVNDKFMPPDDPLGRHGPNLDNFLKKITTTSLDHKRQLCPYGKKCTYGIKCKFYHPERTN
QSQRSLADELRENARLSGSKEDSRITGRGMYPKNDPGFGSSSPSLEQEFEQKLKLEAKSS
DSMGVMLNYWDDILSMKKPLNTGTVADRTSLQAPFSTNPSSIFSSDSGLGSYEMFSESSQ
SIDDLHRMRLSHPPLSGIPSAPAGGQRYYESNMSPFSNFQPDYNAYSSLPLPNPVQNYSL
PAYGGWSYPFYMPQASSLPEPLPRPSSRRSPNAYASQQHSAVPQSNAFQEEREEVRKKLH
AIFNPHHVNKVMEMFPQLKDAQQLAAEVLKLKSKGVVF
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagtcgaggtgttaccatcaacccactggcctgggccaggacagaactgaccac
cttgacctgcagatgaaggtcgacttcttccgtaagctgggttactctccagaagaggtg
aaggccgccctgaagaagctgggctttgggactgacaccaacgccgtactgggggagttg
gtccgttcaggggcgaaggccgtgccctcttccagctctgacagtgatgatggtggcttc
agtttgccccatcggaggggaagctcatctaggggacagggctcaacgctggaggacaac
agtgaacccgaaagtgacctgaaacctatagtcattgatggcagcaacgtagccatgagt
catgggaacaaggaagtgttttcatgccgagggattgagctggcagtcaactacttcctt
gaccgaggacacagaaatatcactgtgtttgtgccttcctggagaaaagagcagcccagg
cctgatgtacctatttcagatcagcatattttggaagagctggaaaggaagaagtttctg
gtgtttacaccttcacgaaggatcggaggaaagcgtgtggtctgctatgacgatcgcttt
attgtcaagttagctcatgagctggatggcatcatagtgtccaacgacacatatcgtgac
ctgcaaagtgaacgtccagagtggaagcgttgcattgaggagagattgcttatgtactcc
tttgttaatgacaagttcatgccacctgatgacccacttggccgtcatggacccaactta
gataatttccttaagaaaataacaacaacgtcgcttgaccacaagcgccaactctgtcct
tatggaaaaaagtgcacatatgggatcaagtgtaagttctaccacccagagcgcaccaac
cagtcacagcgctctctagccgatgagctgcgagagaatgcaagactgtctggttctaaa
gaggacagcagaataactggtagaggcatgtacccaaaaaatgaccccgggtttgggtcc
agctctccctctttggagcaagaatttgaacagaagctcaaattggaggccaagagctct
gacagcatgggtgtcatgctcaattactgggatgacattttgtccatgaaaaagccctta
aatacaggcacagtggctgacagaaccagtctgcaagcaccattctcaactaacccttcg
tccattttcagttccgactctgggcttggatcctatgaaatgttttcagagtcatcccag
agcattgacgacttgcacaggatgagattgagtcatccaccattatccggtatcccttcc
gcacctgcaggtggccagcgctactatgagtccaacatgagtcctttctcgaactttcag
cctgactataatgcctacagttccctacctctgcccaaccctgtccagaattacagtctt
cctgcttatggtggctggtcataccctttctacatgccacaggcgagcagtttacccgaa
cctttaccccgccctagctcgcgcaggtctcctaatgcctatgcaagccagcagcactca
gctgtgccacagtccaacgctttccaggaagaaagagaggaggtcaggaagaagcttcat
gcgatttttaacccgcatcacgtaaacaaagttatggaaatgttcccacagctgaaagat
gcacaacagctggctgcagaggttctcaaactcaagtccaagggagtggtgttctga
DBGET
integrated database retrieval system