KEGG   Ctenopharyngodon idella (grass carp): 127497217
Entry
127497217         CDS       T08802                                 
Name
(RefSeq) endoribonuclease ZC3H12A
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cide  Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:cide00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cide03019]
    127497217
Messenger RNA biogenesis [BR:cide03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     127497217
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 zf-CCCH_4 zf-CCCH RuvA_C
Other DBs
NCBI-GeneID: 127497217
NCBI-ProteinID: XP_051721509
LinkDB
Position
16:3081335..3092111
AA seq 578 aa
MMQSRCYHQPTGLGQDRTDHLDLQMKVDFFRKLGYSPEEVKAALKKLGFGTDTNAVLGEL
VRSGAKAVPSSSSDSDDGGFSLPHRRGSSSRGQGSTLEDNSEPESDLKPIVIDGSNVAMS
HGNKEVFSCRGIELAVNYFLDRGHRNITVFVPSWRKEQPRPDVPISDQHILEELERKKFL
VFTPSRRIGGKRVVCYDDRFIVKLAHELDGIIVSNDTYRDLQSERPEWKRCIEERLLMYS
FVNDKFMPPDDPLGRHGPNLDNFLKKITTTSLDHKRQLCPYGKKCTYGIKCKFYHPERTN
QSQRSLADELRENARLSGSKEDSRITGRGMYPKNDPGFGSSSPSLEQEFEQKLKLEAKSS
DSMGVMLNYWDDILSMKKPLNTGTVADRTSLQAPFSTNPSSIFSSDSGLGSYEMFSESSQ
SIDDLHRMRLSHPPLSGIPSAPAGGQRYYESNMSPFSNFQPDYNAYSSLPLPNPVQNYSL
PAYGGWSYPFYMPQASSLPEPLPRPSSRRSPNAYASQQHSAVPQSNAFQEEREEVRKKLH
AIFNPHHVNKVMEMFPQLKDAQQLAAEVLKLKSKGVVF
NT seq 1737 nt   +upstreamnt  +downstreamnt
atgatgcagtcgaggtgttaccatcaacccactggcctgggccaggacagaactgaccac
cttgacctgcagatgaaggtcgacttcttccgtaagctgggttactctccagaagaggtg
aaggccgccctgaagaagctgggctttgggactgacaccaacgccgtactgggggagttg
gtccgttcaggggcgaaggccgtgccctcttccagctctgacagtgatgatggtggcttc
agtttgccccatcggaggggaagctcatctaggggacagggctcaacgctggaggacaac
agtgaacccgaaagtgacctgaaacctatagtcattgatggcagcaacgtagccatgagt
catgggaacaaggaagtgttttcatgccgagggattgagctggcagtcaactacttcctt
gaccgaggacacagaaatatcactgtgtttgtgccttcctggagaaaagagcagcccagg
cctgatgtacctatttcagatcagcatattttggaagagctggaaaggaagaagtttctg
gtgtttacaccttcacgaaggatcggaggaaagcgtgtggtctgctatgacgatcgcttt
attgtcaagttagctcatgagctggatggcatcatagtgtccaacgacacatatcgtgac
ctgcaaagtgaacgtccagagtggaagcgttgcattgaggagagattgcttatgtactcc
tttgttaatgacaagttcatgccacctgatgacccacttggccgtcatggacccaactta
gataatttccttaagaaaataacaacaacgtcgcttgaccacaagcgccaactctgtcct
tatggaaaaaagtgcacatatgggatcaagtgtaagttctaccacccagagcgcaccaac
cagtcacagcgctctctagccgatgagctgcgagagaatgcaagactgtctggttctaaa
gaggacagcagaataactggtagaggcatgtacccaaaaaatgaccccgggtttgggtcc
agctctccctctttggagcaagaatttgaacagaagctcaaattggaggccaagagctct
gacagcatgggtgtcatgctcaattactgggatgacattttgtccatgaaaaagccctta
aatacaggcacagtggctgacagaaccagtctgcaagcaccattctcaactaacccttcg
tccattttcagttccgactctgggcttggatcctatgaaatgttttcagagtcatcccag
agcattgacgacttgcacaggatgagattgagtcatccaccattatccggtatcccttcc
gcacctgcaggtggccagcgctactatgagtccaacatgagtcctttctcgaactttcag
cctgactataatgcctacagttccctacctctgcccaaccctgtccagaattacagtctt
cctgcttatggtggctggtcataccctttctacatgccacaggcgagcagtttacccgaa
cctttaccccgccctagctcgcgcaggtctcctaatgcctatgcaagccagcagcactca
gctgtgccacagtccaacgctttccaggaagaaagagaggaggtcaggaagaagcttcat
gcgatttttaacccgcatcacgtaaacaaagttatggaaatgttcccacagctgaaagat
gcacaacagctggctgcagaggttctcaaactcaagtccaagggagtggtgttctga

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