Ctenopharyngodon idella (grass carp): 127497233
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Entry
127497233 CDS
T08802
Name
(RefSeq) iroquois-class homeodomain protein IRX-4a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127497233
Transcription factors [BR:
cide03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
127497233
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
127497233
NCBI-ProteinID:
XP_051721529
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Position
16:6541264..6545272
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AA seq
463 aa
AA seq
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MQVVFFYLCCDISKSFQFLMTTNSLTSCCESSTRSISDSSAQTPVYCPVYESRLLATARH
ELSSAAALGVYGNPYTSSQGYGNYVTYGADASAFYSLGTFDAKDGSASAHAGITQAAAYY
PYDPSLGQYQYDRYGSMEGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITK
MTLTQVSTWFANARRRLKKENKMTWPPRNKGSDDKKYDDDDEDGSQEDQIKSETNDDESK
SREDKELQLSDLDDFDTIESESSECELKHRFHMNAHMATTDDRLKEPSPKLSIPGLLEAE
RDLTKSCLKSTAEDCEHDLRHAKTCFQQQGHPLLDSKPRIWSLAQTATSLNPTEYSSCML
RCQPSPSASSPVNGLERQQDSPVTTLRNWVDGVFHDPLFRHSSLNQAQTNTTVSWTTTTK
GSILETGALGRSVGNNNVIKTQQQEATKDSMTFPKGVNKIFCS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttgtatttttttatttatgctgtgacatttccaaatcattccagttcctcatg
accaccaactctttgacatcttgctgcgagtcgagcaccagatccatctcggattcttcc
gcgcagacgcccgtgtactgtcccgtgtatgagagcagactgttggccaccgccaggcac
gagctgagctccgccgcagcgctgggagtctatgggaacccgtacacgagcagtcagggc
tatgggaattatgttacctatggagctgacgcctccgctttctactctttgggaacattt
gatgccaaagatggaagtgcgtctgcgcatgcgggaattacacaggctgccgcatattac
ccatatgatccctccctgggacagtaccagtatgacagatacggatctatggaaggagga
actagaagaaagaacgccactcgcgagacgacgagcacgttgaaagcatggcttcaggag
cacaggaaaaacccctatcccaccaaaggagagaagatcatgctggccatcatcaccaag
atgaccctcacgcaagtgtccacctggttcgccaacgccagaagaagactcaagaaagag
aacaagatgacatggccaccaagaaacaagggctcagacgataagaaatacgatgatgat
gatgaggatgggtcacaagaagatcaaatcaaaagtgaaaccaatgatgacgagagcaaa
agtcgagaagacaaagaacttcagttaagtgacttggacgactttgacaccatcgagtct
gagagctcagagtgtgaactcaaacatcgctttcacatgaacgcgcacatggcgaccacc
gatgatcgccttaaagaaccgtcgccaaaactctccattcccggtctgctcgaagctgag
cgcgatctcaccaaaagctgcttgaaatccaccgccgaagactgcgaacacgaccttcgg
cacgccaaaacgtgtttccagcagcagggccatccattactggacagcaaaccccgcatc
tggtctctggcccagaccgcgacctcgttgaacccgacagagtactcctcgtgtatgctt
agatgtcaaccatcaccctccgcctcctcacctgtaaacggcctggaaagacagcaggat
tcacctgttactactctcagaaactgggtagatggagtttttcacgaccccttgtttaga
cacagctccttaaaccaagcacagacgaacactacagtttcttggaccaccacgaccaaa
ggctcaatcttagagactggagcccttggacgctccgtagggaacaacaacgtgataaaa
acacagcagcaagaagccactaaggacagtatgacatttccaaagggggtgaataaaata
ttctgctcctag
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