Ctenopharyngodon idella (grass carp): 127497285
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Entry
127497285 CDS
T08802
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cide03009
]
127497285
04121 Ubiquitin system [BR:
cide04121
]
127497285
Ribosome biogenesis [BR:
cide03009
]
Eukaryotic type
90S particles
Other 90S particles
127497285
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
127497285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Sof1
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_IFT140_1st
eIF2A
KNTC1_N
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
DUF6481
Motif
Other DBs
NCBI-GeneID:
127497285
NCBI-ProteinID:
XP_051721610
LinkDB
All DBs
Position
16:complement(29182277..29191256)
Genome browser
AA seq
445 aa
AA seq
DB search
MKVKVLCRNPDDYVRETTRDIQRVPRNYDPTLHPFEVPREYTRALNATKLQKVFAKPFVA
SLDGHRDGISCIVRHPKSLSTVLSGACDGEVKVWNLPKRECLRTVKAHEGFVRGMCSRFC
GTSFFTVGDDKTIKQWNMEAPGYGVCEEPINTILGKAVFTDIDHHYREGLFATCGQTVDI
WDEQRSSPIRSFSWGVDSFNCVRYNPVETELLASCGSDRSIILYDTREAAPLRKVIMKMR
SNTLCWNQMEAYYFVCANEDYNLYTYDIRYMDIPVTVHMDHVSAVLDVDYSPTGREFVSA
SFDKTVRIFLKDGGNSREVYHTKRMQHVICVRWSADNKYIMSGSDEMNIRLWKAKASEKL
GLLSAREKAAANYNKKLMEKFRHHPQVKRIACHRHLPRDVLKQKREQRQMKEAQRRKELN
IRKHSKPGSIPVQIENEKHVVAVVE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttaaagtgctttgtagaaacccggacgattatgttcgagagacaaccagagat
atacagcgagtgcctaggaactatgacccgaccctgcatccttttgaggtgcccagggaa
tataccagagccctgaatgccactaaacttcagaaggtgtttgccaaaccctttgtggct
tcactagatgggcacagagatggcatcagctgcatcgtcagacaccccaaaagcctttca
acggtcttatctggtgcctgtgatggggaggtgaaagtgtggaaccttcctaagagggag
tgtttgaggacagttaaggctcatgaaggatttgtacgaggaatgtgctcccgcttttgt
ggcacctcctttttcacggtaggagatgacaagaccatcaaacagtggaacatggaagca
ccaggatatggagtttgtgaggagccaattaacacaattctggggaaggcggtgttcact
gacattgaccaccactatagggagggactgttcgcaacctgtgggcagacggtggatatc
tgggatgagcagagaagcagtcccatccgctccttcagctggggtgtggacagcttcaac
tgcgtccgctacaaccctgtggagaccgaacttctcgccagctgtggatcagacagaagt
attatcttgtatgacactagagaagctgcaccactcagaaaggttatcatgaaaatgaga
agcaatacactttgctggaaccaaatggaagcctattattttgtttgtgcaaatgaagat
tacaacctctatacttatgacataaggtatatggatattcctgtgactgtgcacatggat
catgtatccgctgtgctggatgtggattattcacctacaggaagggagtttgtatccgcc
agctttgacaaaaccgtccgcatctttctgaaagacggaggcaacagcagggaggtgtac
cacaccaaacgtatgcagcatgtcatctgtgtgagatggtcagctgacaacaaatacatc
atgagcggttccgacgagatgaacattcggctgtggaaggccaaagcctcagagaagctc
ggattgctctccgcccgagaaaaagctgccgcaaactacaacaagaagctgatggagaaa
tttcggcaccacccacaagtgaaacgcatcgcctgtcaccgccacctgcccagagatgtc
ctgaaacagaagagagagcagcggcaaatgaaagaagcccagcgcaggaaggaactaaac
atccgcaaacacagcaagccgggatctattcctgtgcagatagaaaatgagaaacatgtg
gtggctgttgtggagtaa
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