Ctenopharyngodon idella (grass carp): 127497363
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Entry
127497363 CDS
T08802
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127497363
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
127497363
NCBI-ProteinID:
XP_051721744
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Position
16:25291809..25302849
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AA seq
829 aa
AA seq
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MKSNQERCNECLPPKKREILALEEKQVLVSAAVSESQSGENLAWLASVATMASMAHIPNN
AGPSQCNSAEPDSPPPSNKALTVVTEYPPTTTSAGFSFSSNSSTYRGVFSGPTVLTANPT
VLSTSLPQTIGSVQYTQLPPNLQLIGPYTSYISSQIVPSTTSPTQPRRTPQEVLATTAVI
SQASSLDSQNHHVISSISNVSHSQCIQVESAPLGLTVSSPSVQLPLQIHPHSTVLAPHAL
ALTPSQVVLHYTDGFIAKQPDSHPREVQNGALGEVTVVKHSTTMAKGISSRPEGDQSHKQ
THNLGLQTQAQVLLPADYSTHDRAGLQTSLMLVSSSHLAANSNSELQSILGKDHSSLHLA
ERGGICIGKPMSRVSTLTSSDSQVSPASTISPHTLLQAPHNTPQQELSTSLYPATQLPII
GYITSASGGPQQAVTGYQSNLPQHVVISGNPSLLIPVSATNINPSPAEPEVTHCSVIPSV
ANASTALPQTFINTSPPAAASSVLANGKDITGSDGSHTPCAMPSPTQIQLPVLSASVVGS
PVPVTPPTSTSPHSSPSSPSAGLPPFFMKGSIIQLADGELKRVEDLRTEDFVQSAEVSGE
LKIDSSTVERIECSRTPNAVIIQFSVGENKAQVCVEVLVEYPFFVFGQGWSSCCPDRTTQ
LLALSCAKLSVGDVCISLTLKSLKNSIQKKNNFSESVMKHNNPLKAAKNNGPIEERPTQM
EDLKKGHKITSRVENSVEGTLVETSNQRNVLTLSENGGINPQTLVNLNNQAEKTYTSSAE
RAVSRKRRWSAPEKGEMWRSQEDPQILPKFSCLPHQLKVSIEGRSSTGC
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctaaccaggagcgctgtaatgagtgccttccgccgaagaagcgggagatttta
gctctggaggagaagcaggtgctggtgtcagctgctgttagtgagagccagagtggagag
aatttggcttggctagccagcgttgctaccatggctagcatggcccacatccccaacaat
gcaggcccatcacagtgcaacagtgctgagcctgacagccccccaccatcaaataaggct
ctcactgtggtgacggaatatcctccaactactacatctgctggcttttctttctcttcc
aatagctccacatacagaggagtcttctcggggcctaccgtgctaacagcaaatcctacg
gttctctccacaagccttcctcaaaccataggctctgtccaatacacacaacttcccccc
aatctccagctcatagggccctatacaagttatatctcttcacagattgtgccatccaca
accagtccaacacagccacggaggacaccacaagaggtcttggctacaacagctgtcatc
tcccaagcatccagccttgattcacagaatcatcatgtgatttcttctatatcaaatgtt
tcccacagtcaatgcattcaggtagagagtgctcctttaggtttgacagtttcctcccct
tctgtccaactgccccttcaaatccatccacactcaactgtccttgcccctcatgccctg
gctctcaccccctctcaagtggttctacactacaccgatggcttcattgcaaagcagccg
gactcccatcccagagaggtgcaaaatggtgcactaggagaggttacagtggtcaagcac
agtactactatggccaaagggatctctagccgaccagaaggtgaccagagccacaagcaa
actcataacctaggcctccagacccaagctcaggttttgctcccagcagactatagcact
catgacagagcaggactgcagacatcgctgatgttggtatccagtagccaccttgcagca
aacagcaactctgagctccaaagtatcttgggtaaggaccactcatctttgcaccttgct
gagagagggggtatatgcataggcaagccaatgtccagagtgtccactcttacgtcctca
gacagccaagtttctccggcctccacaatctccccacacacactcctgcaggctcctcac
aacactccccaacaggagctctccaccagcctttaccctgccacacagctcccaattatt
ggctacatcaccagtgcttctggtggaccccagcaagcagtaactggttatcagagcaac
ctgccacagcacgtggtgatctcaggcaatccctccttgctcattccggttagtgccact
aacatcaatccatctcctgctgagccagaggtcacccactgttctgtcatccctagtgta
gccaatgcatcaacagctctgcctcagacctttattaatacatccccacctgcagctgca
tcttcagtcctagccaatggtaaagacatcactgggtctgatggaagtcataccccctgt
gccatgccaagtccaacccaaatacagctgcctgttctttcagccagtgtagtgggatct
ccagtccctgtaacacctccaacatctacaagtcctcacagctcaccatcatcaccatca
gcgggcctaccaccattcttcatgaagggctctattatccagttggcagacggtgagctg
aagcgcgtggaggatctgcggacagaggactttgtgcaaagtgcagaggtgagtggagaa
ctgaagattgactccagcactgtagagcgcatagagtgcagccgtacacccaatgctgtc
atcatacagttctcggtgggagagaacaaagcccaggtgtgtgtagaagtcctggtggaa
taccctttcttcgtgtttggtcaaggctggtcatcctgctgccctgaccgcaccacccag
ttgctagcgctatcctgtgccaaactctctgtgggtgatgtttgtatctctctcaccctt
aaaagcctaaaaaatagcattcaaaagaaaaataatttttcagagtctgtgatgaaacac
aacaaccctttgaaagcagccaaaaacaatgggcccattgaggaaagaccaacccaaatg
gaggatcttaagaaaggacacaaaattacatcaagagtggagaatagtgttgaaggaaca
ctggttgagacttccaaccaaagaaatgtgttgaccctctcagagaatgggggcataaat
cctcaaacactggtgaacctaaacaaccaggcagaaaaaacatacacgtctagtgcagag
agagcagttagccgcaagaggagatggtctgccccagagaaaggagaaatgtggaggtcg
caagaggaccctcagattttacccaaattttcctgcctcccacatcagctgaaggtcagc
attgagggccgctccagcacaggttgctga
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