Ctenopharyngodon idella (grass carp): 127497397
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Entry
127497397 CDS
T08802
Name
(RefSeq) POU domain, class 2, transcription factor 2 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127497397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127497397
03021 Transcription machinery [BR:
cide03021
]
127497397
Transcription factors [BR:
cide03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
127497397
Transcription machinery [BR:
cide03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
127497397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
TAP42
Motif
Other DBs
NCBI-GeneID:
127497397
NCBI-ProteinID:
XP_051721788
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All DBs
Position
16:complement(15961564..16003995)
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AA seq
684 aa
AA seq
DB search
MFVPLPVPFVLPRTASDLHAWRLKSPLALRSHSDIRMSKPVEVENPAADSPMESTDSERN
GSDSNNQVQPMKINPFSLSPTLSSSTKAKVEDCGEMSPAAPAQTALPHTQLMLTGGQLAG
LTALLPAQQQLLLQQAQLLAAAVQQSHVAHAANQQQAQQQASQQAAQQQSQGQSQSTQEQ
TATPVPPPPHQLPLSQPIQLTAQDIQQLLQLQQLVLVPGHTLPSPAQFLLPQTQQGQQGL
LSTPNLIPLPQQNQGSLLAAPPRLSLQAQREKVAESNVTTVTPVTSHPEEPSDLEELEQF
ARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLT
DAETMSMDSTLPSPSALSSPSLGFEGLPGRRRKKRTSIETNVRVALERSFITNQKPTSEE
ILLIAEKLNMEKEVIRVWFCNRRQKEKRINPSSATPPLPSQPQPTSHKPPCYSPHMMPSQ
GPSQTLSSLSTAVTTMSSVCPLTSSGPSLSSASSPVTPPPRADASPAPPTHSTLSLNTGL
WHKKNGDVSNYITDFAASLRNTVRGVNTGINQALLGSNPLATIQALAASGGQLPISSLEG
SSKVLIGGSGAQGAGLTSSLFLNHSSLMPMATGPGMGLGGSAVGKTSFPVAGGMSPSPCS
SPVSSCSSGELLHSPHSIGGAKIE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcctttgccggtgccgtttgtcttgccgagaactgcctctgatctccacgcc
tggcgcctcaagtccccgctggctctccgctctcactccgatatcagaatgtcaaagcca
gtagaggttgagaatccagcggcagactctccgatggagagcacagactctgaaagaaat
ggctcagattcaaataatcaggttcagccgatgaaaatcaaccctttctccctttcaccc
acactgagtagcagcaccaaggctaaggtggaggactgtggtgagatgtctcctgctgca
cctgctcagacggcccttccacacacacagctgatgctaacgggtggccagctcgcaggg
ttgactgcacttttgcctgcacagcaacagctgctcttacagcaggcgcagctcctcgct
gcagctgtgcagcagtcgcatgtggcccacgcagctaatcaacagcaagcccagcagcag
gccagtcagcaggcagctcagcagcagtcacagggccaatcgcagagcacacaagaacaa
accgccacccctgtcccgcctcctcctcaccagctccctctttctcagccaatccagctc
actgcccaggacattcagcagttgttacagctgcagcagttagtccttgttccaggacac
actctgccttcacccgcacagtttcttttaccacaaacgcagcaagggcagcaagggctg
ctgtcaacaccaaatctaattccactacctcagcaaaaccaaggaagcctgctggccgct
ccacccagacttagtcttcaagcacagagagagaaggttgcagagagcaacgtgaccaca
gtgacgccagtgacctctcaccccgaggagcccagtgacctggaggaactggagcaattt
gcccgcacattcaagcagagaaggatcaaattgggcttcacacagggtgatgtgggattg
gccatggggaaactctatgggaatgatttcagtcagaccaccatctctcgatttgaagcg
ctcaatctcagcttcaagaacatgtgcaaactcaaacctctgttggagaagtggctgact
gatgcagaaacaatgtcgatggacagcaccttgccgagtcccagtgctctttcctctccc
tctctggggtttgagggcctgcctggccgccgcaggaagaaacgcaccagcattgagacc
aatgtccgcgtcgctctggaacgcagcttcatcacgaaccagaagcctacctcagaggag
atcctgctcatcgctgagaaactcaacatggagaaggaggtgatccgcgtctggttctgc
aaccgccgacagaaagagaaacgtattaacccctccagtgccacccctcccttgcccagc
caaccccagcccacctcgcacaaacccccctgctacagcccgcacatgatgcccagtcag
ggaccatcccagacattgagcagtcttagtacagcagtgaccaccatgtcatcagtttgc
cctctgacctcaagtgggccctccttaagctccgcctcatcacccgtaaccccgcctcca
cgtgctgatgccagccccgcccctccgactcacagtacactaagtctgaacacaggttta
tggcataaaaagaatggtgacgtttctaactacatcactgactttgctgcaagtttgagg
aatacggtgaggggagttaacacaggaataaaccaagctctccttggcagcaacccactt
gctactattcaagctctagcggccagtggtggccagctgcccatttccagtcttgagggc
agcagcaaggtgttaattggtggttctggggcccaaggagcaggtcttacctcttccctc
ttcctcaaccactcctctttgatgcccatggcaacaggccccggcatgggattgggcggt
tcagctgttggcaaaacctcatttcctgtcgcaggcggcatgagtccctccccttgctcg
agccccgtctcttcctgctcttccggcgaattgctacacagcccacactcgattggaggg
gctaaaatcgagtga
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integrated database retrieval system
