KEGG   Ctenopharyngodon idella (grass carp): 127497421
Entry
127497421         CDS       T08802                                 
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    127497421
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cide03400]
    127497421
DNA repair and recombination proteins [BR:cide03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     127497421
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT F5_F8_type_C
Other DBs
NCBI-GeneID: 127497421
NCBI-ProteinID: XP_051721823
LinkDB
Position
16:complement(30982158..31006038)
AA seq 618 aa
MPEIKLKHIVSCSSEDNTHKADNLLSSDTYRKWKAARPGEKQVSVILQLEKEEQIHSIDI
GNEGSAFIEVLVGHSTSVKDQDFEVLLVTSSFMSPTESRNGTNTNRVRFFGPTQLVKGTA
QEKWDRVKIVCSQPYSKSIAYGITFIKLHSPPDDNDAPITTPPKLTKLGQFRVKDESPSS
GSNIQPGSLFFSRESTAKSSAGLKVSPQNDRLSYAAAALKSDGSSTHSSSSSTSTQQAPV
KRKFEFSKERLEAAGPPPKKPSSSASAESNSATPKSKTKTSATASPISTASPAQKTSDKR
ESPKSKPEPKPKPKPKPKSAEPVAFNRIMEGVVFVLSGFQNPFRAELRDKALAMGARYRP
DWTPDSTHLICAFANTPKYSQVKAAGGIIVRKEWVMDCHKTKQKISCKRYLMDGAESSSE
SEAEQDESEEEMQKTKTPEKRHVTPKKQPIKEEEEDYGGSTDAEGPDDDTSGMDTEDELN
RVEMESRRKKAVKESAGVVKDEDPYGGSTDENTDAEEEEDKPIPELPDFLTGKRFYLYGK
FPDNQKRQLQRYIIAFNGAVEDYMSEKVQFVITSEGWDESFEDALMENGSLSFVKPSWIF
AINDRQKMLPYQPYTVVP
NT seq 1857 nt   +upstreamnt  +downstreamnt
atgcctgaaatcaaacttaagcatattgtgtcttgcagcagtgaggacaatactcacaag
gcagacaacctcttgagctccgacacgtacaggaaatggaaagctgcaagacctggagag
aagcaagtttcagttattcttcaattggaaaaggaagagcaaattcacagcatagacatt
ggaaatgaaggctctgctttcattgaggtccttgttggacactccacatcagtcaaagat
caagactttgaggttctgttggtcacgtcgtccttcatgtcacccacagagagccgtaac
ggcacaaacacaaaccgagtgcgcttcttcggacctacccagctggtgaagggcacggcg
caggagaagtgggaccgcgtgaagattgtgtgcagtcagccttacagcaagtcaatagcg
tatggaatcacctttataaagctgcattctcctccagacgataatgatgctcccatcacg
actccaccgaaactaactaaactgggtcagttccgtgttaaagatgaatccccttcttct
ggctcaaatatccagccgggaagtctgttctttagcagagagagcactgctaaatccagc
gcaggactgaaagtgtctcctcagaatgacaggttgagttacgccgctgctgctttgaag
tccgacggttcgtccacacattcgtcttccagcagcaccagcacacaacaggctcctgtg
aagaggaagtttgagtttagtaaagagcgtctggaagccgcaggtccaccacccaaaaag
cccagttcatctgcctctgctgaatcaaactctgccaccccaaaatctaaaacaaaaacc
agtgcaactgcaagtcccatctccaccgcttctccagcccagaagacatcagacaagaga
gagagtcctaaatccaagccagagcccaaaccaaaacccaaacctaagcccaagtctgca
gaaccggttgctttcaaccgcatcatggagggagtcgtgtttgtcctgagtggcttccag
aaccccttccgcgcagagctgcgagacaaagccctggccatgggagccagatacagaccc
gactggactccagactccacacacctcatctgtgcgtttgccaacactcctaagtacagt
caggtgaaagcggccggaggcattatcgtcaggaaggagtgggtgatggactgtcacaag
acaaagcagaagatttcctgcaaacggtatctcatggatggagccgagtccagttcggag
agtgaagcagaacaggatgagagtgaggaggaaatgcagaaaacgaaaacaccagaaaag
aggcatgtgaccccaaaaaagcagccgattaaggaagaagaggaggattatggtggttca
acagatgcggaaggcccagatgatgacacgtctggcatggatactgaagatgagctgaac
agggtggagatggagagcaggaggaaaaaagcagtgaaggaaagcgcaggtgtggtgaaa
gatgaagatccgtacggcggctctacagatgagaacacggatgctgaggaagaggaggat
aaacccatccctgaactgccagacttcctaacagggaagcgcttctatctctacggcaag
ttcccggacaaccaaaaaaggcaacttcagcgctacatcatcgccttcaacggagctgtt
gaagactatatgagcgagaaggtccagtttgtcatcaccagtgagggatgggatgaatct
tttgaggatgccttgatggaaaatggaagtctgagctttgtgaagccttcgtggattttc
gccatcaatgacaggcagaaaatgttgccgtaccagccctacactgtagtcccttaa

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