Ctenopharyngodon idella (grass carp): 127497514
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Entry
127497514 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: DENN domain-containing protein 4B-like
KO
K20163
DENN domain-containing protein 4
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127497514
Membrane trafficking [BR:
cide04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
127497514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
SPA
Motif
Other DBs
NCBI-GeneID:
127497514
NCBI-ProteinID:
XP_051721969
LinkDB
All DBs
Position
16:complement(34966230..34986820)
Genome browser
AA seq
1466 aa
AA seq
DB search
MTEERCPQLVDYFVVAGLAGDSSPLDEEGQQRGVRAVQPVTDLAVIARGLGEDVPEGFTC
IEKTQGGHPAELSAGLLNNPHMFLCYRRGHDKPPLVELGVLYEGKDPVRPGWQVIETTPY
SRSASLSSGGPATHRTFLTFRRAPDSQALNTLGVTEISLLMPSKGETAPHTYCRVDKNLN
TGMWGPALYLCYKRSVAKANALVYEAGLISRYPEEDLESFPLPDSVPVFCLPMGVTVESW
PLNTKYQLPIFSTFVLTSASGDKVYGAAIQFYETYPRESLSERQCVRLGLLSVVDRRPIT
NRSVQVKKSICVLSHWPFFSVFQKFLTFIYRYSISGPHVLPLEKHISSFMHNVPFPSAQR
PRILVQLSPYDNLLLCQPVSSPLPLSGASFVKLLQNLGPENACTLLLAVLTEHKLLLHSL
RPDVLTSVSEALVSMSFPLRWYCPYIPLCPLRMADVLCAPMPFIVGVHSSYFDLYDPPSD
VVCVDLDTNTIFQSEDKKPLSWRSLPRKHGKILQNSLTNLHKTLEKIYTPGQEEATLEFL
LTDYDLIYGRQKQLELEIQEAFLRFMSFLLRGYRSFLLPITQAPSDRTTDCSSLFNLQGF
LKSRDRTQQKFYTQLTKTQMFTQFIEECSFVSDRHASLEFFDECVQKVDVEKPEDVRLID
HDECHSGEHTVFIMPPEEPQEPDGSECPAHYSYDTFPILQPDLFDRPMDQLRTPAKGSAP
SSPAPRRTKQEIKLAQKKAQKYSTVPDMWSKCLLGHCYGLWFIYLPTFVKAESTKVRALH
AAYEVLKHMETRKVVLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKKAGITPNTITYGYY
NKAVLESKWPSTNQGGRLRWAKLRNVILAVAQFRQPIKQQHRSASFGSRPGDVLSKPRPY
SALIRQSSWSGLSESSSHESLTKSNSLSSVQASGSKLKLSKKASADAAASRKPPAGPVLV
RRSDVCLSTFYTDCAETADADADADCRCQPAERDSRSAEVRETLNRKSVDENYNNVSSPS
RGLAGKLQQLLTPTRNRTSVRRAASVDDRRPXGSGSSRRTSDHKPSRKIQMAESLLKAKE
RLYNATSESSLSVGSDIDMTDIHTLAVPLRKSWDSAQEGAGIEVLMSSCSLCRSCNSLVY
DEEIMAGWSSDDSNLNTTCPFCSAPFVPLLNAEICDMGPVCSAERSHLNSEDELENSIRP
PAGRDDTLQHLCNGVRETDSSSETSSQSESSSLAGGSPQVTVAYLSPLVLRKEMESLLEN
EGEAVLSQVQLLDSHSILFWNLVWYFSRLGLPSNLSQLLRASPLTARLTQGSEGAAVRVR
LMWDTLTPDMEQWPPLYMLWRIHSGVPMRAYNWRHHNHPFTLSFLEEVLRWVGMNEVHKA
ITLFLDTVAKQPGTPRIQRSLYREMLFLTLAAMGKDHVASFDKRYKAAIVRLSGSLGREE
LRRKRIQPPSPKAVDCRRCFLLPLEC
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagagcgatgtccgcagctggtggattatttcgtggtggcgggtctggcaggc
gactcttctccgctggacgaggagggtcagcagaggggcgtgcgagcggtgcagcccgtc
acggatctggccgtgatcgcccgcggcctcggggaggacgtcccggagggcttcacctgc
atcgagaagacacaaggaggccatccggcggagctgagcgccggactgctgaacaacccg
cacatgttcctgtgctacaggagaggacacgacaaaccgcccctcgtagagctcggcgtt
ctgtacgagggtaaggatcccgtgcggccgggatggcaggtgatcgagacgacgccgtac
agccggtcggccagcctgagctccggcggccccgcgacccaccgcaccttcctgacgttc
cgcagagcgccggattcacaggcgctgaacacgctgggcgtgaccgagatctcgctgctg
atgcccagcaagggcgagacggcgccgcacacctactgccgagtggacaagaacctcaac
acgggcatgtggggtccagcgctgtatctttgctacaagcgttcagtggctaaagcaaac
gctctggtgtacgaggcaggtctgatcagtcggtatcctgaggaggatctggagtcgttt
cctctgccggattcagtcccagtgttctgcctcccgatgggtgtgacggtggagagctgg
ccgctcaacaccaaataccagctgcccatcttctccacgtttgtcctgaccagcgcctcc
ggagacaaggtgtacggtgcagcgatccagttctacgagacgtacccacgcgagtctctg
tccgagaggcagtgtgtgcgtctgggtctgctgagcgtcgtggaccgccggcccatcacc
aaccgcagcgtgcaggtcaagaagagcatctgcgttctgtcgcactggcccttcttcagc
gtcttccagaagttcctcaccttcatatacagatactctatctctgggccgcacgtgctg
ccgctggagaagcacatatcgagcttcatgcacaacgtcccgttcccgtccgctcagcgt
cctcgtatcctggtgcagctctctccgtatgataacctgctgctctgtcagcccgtctcg
tccccgctgccgctcagtggtgccagttttgtgaagctgctgcagaatctgggtcctgag
aacgcctgtacgctgctgctggccgtcctgaccgaacacaagctgctgctgcactcgctg
cggcccgatgtgctgacgtccgtcagcgaggcgctggtgtcgatgtcgtttcccctgcgc
tggtactgcccctacatccccctgtgcccgctgcggatggcagatgtgctgtgcgcgccc
atgcccttcatcgtgggcgtccactccagctacttcgacctgtacgaccctccatctgat
gtggtgtgtgtggatctggacaccaacaccattttccagtctgaagataagaagcctctg
tcctggaggtctttgcccaggaaacatgggaaaatcctgcagaactctctgaccaacctg
cacaaaactctggagaagatctacacgcccgggcaggaggaggccacgctggagttcctg
ctgacggactacgatctgatctacggccgtcagaagcagctggagctggagatccaggag
gcgtttctgcgcttcatgagctttttactgagaggctacaggtccttcctgctgcccatc
acacaggcgccgtcggaccgaaccacagactgcagctccctcttcaacctgcagggtttc
ctgaagtcacgtgatcgcacgcagcagaagttttacacccagctcacgaagacgcagatg
ttcacgcagtttatcgaggagtgctcgttcgtcagcgaccgtcacgccagcctggagttc
ttcgacgagtgcgtgcagaaggtggatgttgagaagccggaggacgtgcgattgatagat
catgacgagtgtcacagcggcgaacacacggtgttcataatgcctccggaggaaccgcag
gagcccgacgggtcggagtgtcccgcacactacagctacgacaccttcccgatcctccag
ccggatctgttcgatcggccgatggatcagctgcgcactcctgctaaaggaagtgccccg
agtagccccgccccccgccgcaccaaacaggaaatcaagctggcgcagaagaaggcccag
aagtactcgacggtgccggacatgtggtccaagtgcctgctgggtcactgctacggcctg
tggttcatctacttacccacgtttgttaaagcagagagcactaaggtccgcgcgctgcac
gccgcatacgaggtcctcaaacacatggagacgcggaaggtggtgctgcccgacgaggtg
tgttaccggatcctgatgcagctgtgcggtcagtacgggcagcccgttctagcggtccga
gttctgctggagatgaagaaagctggaatcacgcccaacaccatcacatacggatactac
aataaagcggtgctagagagcaagtggccatccaccaatcagggagggcgtcttcgctgg
gcgaagcttcgtaacgtgatattggccgtggctcagttcaggcagccaatcaaacagcag
cataggagcgcgtctttcggttcccgcccaggagatgtgctgtccaagccccgcccctac
tcggctctgattcgtcagtccagctggagcgggttgagtgaaagctccagccatgaatct
ctgaccaagagtaacagtctgagcagcgtgcaggcgtcaggaagcaagctgaagctgtca
aagaaagcgtcagctgatgccgcggcctcccgcaagcctcccgccggccctgtgctggtg
cgccgcagcgacgtctgcctgtccaccttctacacagactgtgcagagaccgcagacgca
gacgcagacgcagactgcaggtgtcagcctgccgagagggacagcaggtcggcagaagtg
agggagactctaaacaggaagtcggtcgatgaaaactacaacaacgtttcttctccgagc
cgtggactggccgggaaactgcagcagctgctgacgcccacgaggaaccggacgtcagtg
cgacgggccgccagcgtggacgaccgacggccgngaggcagcggaagctcccgccgcacc
tccgaccacaaaccgtcacggaagattcagatggccgagagtctgttgaaggccaaagag
cggctgtataacgccacgtctgagagctcgctgtctgtagggagtgacatcgacatgact
gacatccacacgctggcggttcctctcaggaagtcgtgggattctgcacaggaaggggcg
ggaattgaggtgctgatgtcgagctgctcgctgtgccgcagctgtaattctctggtgtat
gatgaggagatcatggcgggctggtcatctgacgactccaacctcaacaccacctgcccg
ttctgctccgcaccgttcgtccctctgctgaacgcggagatctgtgacatggggcccgtc
tgcagtgcggagcgcagtcacctgaactcggaggatgagctggagaactccatcaggcct
cctgctggccgggacgacacactgcagcacctgtgcaacggcgtcagagagaccgactcc
agctccgagaccagcagccaatcagagagcagcagcctagcgggcggatccccgcaggtg
acggtggcgtacctgagcccgctggtgctgcgcaaggagatggagagtctgctggagaac
gagggcgaggctgttctctctcaggtccagctgctggacagtcactccatcctcttctgg
aatctggtgtggtacttctcgcgcctcggcctgcccagtaacctgtcgcagctgctgagg
gcgtctccgctgaccgcacggctcacgcaggggtcagagggcgcggcggtgcgcgtcagg
ctgatgtgggacactttgacccctgacatggagcagtggccgccgctctacatgctctgg
aggattcacagtggcgtcccaatgcgtgcctacaactggcggcatcacaaccatcccttc
acccttagcttcctggaggaagtgctgcgatgggtcggcatgaacgaggtacacaaagcc
atcacgctcttcctggatactgttgctaagcaaccaggcactcctcggatacagaggagt
ctgtacagagagatgctcttcctcacgctggctgctatgggcaaagatcacgtcgcttcg
tttgataagcgctataaggcggcgatcgtgcgcttgagtggatctctgggccgagaggag
ctgcggaggaagaggatccagccgcccagtcctaaagccgtcgactgcagacgctgcttc
ctgttgccgctggagtgctaa
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