KEGG   Ctenopharyngodon idella (grass carp): 127497643
Entry
127497643         CDS       T08802                                 
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    127497643
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cide03400]
    127497643
DNA repair and recombination proteins [BR:cide03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     127497643
SSDB
Motif
Pfam: DUF3337 WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 Beta-prop_SCAP NBCH_WD40 Beta-prop_EIPR1 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_Vps41 WDR54 WD40_RFWD3 WD_LRWD1 Beta-prop_HPS5 Beta-prop_IP5PC_F Beta-prop_NUP159_NUP214 WD40_like Tfb2_C RAWUL
Other DBs
NCBI-GeneID: 127497643
NCBI-ProteinID: XP_051722232
LinkDB
Position
2:38120900..38132428
AA seq 677 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIVRIWSVN
QHKQDPYIASMEHHTDWVNDIILCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQAG
TVIISGSTEKVLRVWDPRTCAKLMKLKGHSDNVKSLLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHIYSGGRDRKIYCTDLRNPDIRVLICEEQAPVLKM
ELDKSADPPQAIWVSTTKSFVNKWSLKGMLNFRTSGDYDNDCSAPLTPLCTQPEQVIKGG
TSIVQCHILNDKRHILTKDSNNSVAFWDVLKACKGEDLGKVDFDEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDSFAAWVAAKDAGFTSPDGSDPKLNLGGLLLQALLEFWPRTHIN
PMEEEENELNHVNGEQESRIQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDTESQTTSSSANEKPGEQEKEEDMAVMAEEKIELMCLDQVLDPNMDLRTVKHF
IWKSGGDLTLHYKQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcgactcatcacagacagaacgctgctggacggaggaaagtccaggtttcctatgtg
attagggatgaggtggagaagtacaatcgtaacggtgtaaatgcccttcagctggatcct
gctctcaacagactctttacagccggtcgagactccatcgtcaggatatggagtgtcaat
caacacaaacaggatccttacatcgcttcgatggagcatcacactgactgggtgaatgac
atcatcctctgctgtaatggaaaaacattgatatcagcctcctcggacaccactgtgaaa
gtctggaatgcacacaagggattctgtatgtccacgttacggacacataaggactacgtc
aaagctttagcatatgcgaaagacaaggagctggtggcatcagccgggctggacaggcag
atcttcctgtgggatgtgaatacgctgaccgctctgaccgcctctaataatacagtcacc
acttcctcgctgagtggaaacaaggactccatctacagtctggccatgaatcaggcagga
accgtgatcatctcaggatctacagaaaaggttttgagggtctgggatccacggacatgt
gccaagctaatgaagttgaaaggccacagtgacaacgtcaagtcattattactaaacaga
gacggcacccagtgtctctccggtagctcagatggtacaatacgcttgtggtctcttggc
cagcagcgatgtattgccacataccgggtccacgacgagggtgtgtgggccttgcaggtg
aacgaggccttcacgcacatttactctggtggacgtgaccgaaaaatctactgcactgac
ctgcgaaaccctgacatacgtgtgctcatatgtgaagagcaagctcctgtcctaaagatg
gaattggacaaatcagccgaccctcctcaagccatttgggtgtccacaactaaatcattt
gtgaacaaatggtctctaaagggcatgcttaacttcagaacatctggagactacgacaat
gactgtagtgccccactgactcctctgtgtacacagccagagcaggtcatcaaaggtggc
accagcatcgttcagtgtcatattctcaatgacaagaggcacatactcactaaagacagc
aataacagtgtggcattctgggatgtcctcaaggcatgcaagggagaagacctgggtaaa
gtggactttgatgaggaaattaagaagaggtttaagatggtctatgtgccgaattggttt
tctgtagatctcaaaacagggatgctgactatcacgctggatgaaagcgattcctttgcg
gcgtgggtggcagctaaagatgctggttttacaagcccagatggctctgaccctaagttg
aatctgggtgggctgctcctgcaggctctgttggaattctggcccagaactcacataaac
ccaatggaagaggaggaaaatgaactcaatcatgtaaacggtgaacaagagagtcgaatt
caaaagggcaacggctacttccaggttcccccacacactcctgtcatctttggtgaagca
ggcggaagaacgctgtttaggttattatgccgtgattctgggggagagacagagtctatg
ttactgaatgaaactgtacctcaatgggttattgatatcactgtagataaaaacatgcca
aaattcaacaagatcccattctacctccaacctcattcatcatctggagccaaaacactc
aaaaaggaccgtctgtctgcgagtgacatgcttcaggtgcggaaagtgatggaacacgtc
tatgagaagatcatcaaccttgacacagagtcacagaccaccagctcttcagccaatgag
aagccgggagagcaggagaaagaggaagacatggcagtgatggccgaagagaagattgag
ctcatgtgtttagatcaggttttggatccaaacatggacctccggactgttaagcatttt
atctggaagagcggtggagacctgacccttcattataaacagaaatccacgtga

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