Ctenopharyngodon idella (grass carp): 127497672
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Entry
127497672 CDS
T08802
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127497672
Transcription factors [BR:
cide03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127497672
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Tudor_5
Motif
Other DBs
NCBI-GeneID:
127497672
NCBI-ProteinID:
XP_051722287
LinkDB
All DBs
Position
16:complement(15832846..15883775)
Genome browser
AA seq
2635 aa
AA seq
DB search
MRPPKKQRGRSPLSTRAKGARKRGGKPEGHSQTTPPAPSHQKYTPSKEDSSQDKHINSSN
ISNSEGLNKQIRERTMETSKSEENAVIVNKAKSPRNINANNLTDNTDSIKIASNAHENLH
SNSTDICNTNTQDFTSTNSKGSNQHANSAPSNTQNTNNTANSLNKSNSFSANHTSTTPSS
RKTATFKARVPKKKYMYEHQASSTSPISSIPVAQLALHSNHSNPLCSPHNSISQSSTPVV
RDDLVKADSDLDNSENSRREMGKIASTEAPKGDRTKGDMLKSEVPSEREKVIQAVEVDGY
GEQAPNSVRSSSTDTASEHSVDLEVPEPSCVQLNTGNHVRRFNLSNNSTLSVLLSPNHTQ
TEQRGSATIAEALAKGLKNQRVLARRRPRRNLKEDKKLIKECVFICGVVRGSSREQLNVE
LQINGEGTLHSYPFHTLVSRPHQPIDLILDAPPPGNELVEVGTRVCVPYGGDNDRECYRE
GVVAQVDSHSACPYMVLLQEELDQEKERCSNEETQQTSSTRTVCVARQNLRLLVPPWDGV
MREKEREEREHREEIEVERELCQLSEGMDMVTAGTPRDNCRFPSPHTGVHHYGSTHLSSS
TSPAVVMVANNMFTLAARTEDEGTGNRERVREREHERKQLQTPEVDMEVLRLNMAPLRDD
GGHLVSGGPKACAPNQHRQIFSKPPGYPSPITVVRGISGTSLGSPQPTPSPAILGSDGGI
SHPMPPSVPPSPSSRGSLTPLEKTPTPSQTSTPIPGSSASSSASSSRSRTPLSAAQQKYK
KGDVVCTPNGIRKKFNGKQWRRLCSREGCMKESQRRGYCSRHLSMRTKEMEGAVGERGSG
GGGESSSGTVTPSDLRGRASSEFDWDETSRDSSETSSRGTDSRPRLGLPSLVSQDYSRFD
FDECEAATMLVSLGSRSVTPSYSPISNQSPFSPTPSPSASPLFGFHPANFSPITASPVLP
PRRHKHPSGTNSGVPKHGTGGTEREKDRHLSGIVPSFHTSLTFTVPMSPGKRRTDAPPPP
TPLSQEYAKPDQEQSSRDSSLVTNLCIISPQTTTVTHPQRLPSTTASSPPASPLSLESGS
QCTVSQQPLRDSPVIVRNPEVPLIKFTELPLARVAAVDRTNSTENSQTGVHPETGLQVPV
PINAASTNGSVLLQNPTSTLVLVSTTSSIPNPTPAGLPTQSSATLACISVPSPVPGPGLI
GAGDGGGQDKSAPVTLQQPVPCHPAPTALLPLILPTETLHPVPCKDIIMGRPGTVWTNVE
PRSVPVFPWHSLVPFLAPTQSDPSAQPGEGQQTVSHPQTASLKKESQSGSVLKEIIEGAH
NPSSRPTPSADELPPEREKDAERERPDSETESDVDDPFFPGVLPDPPISASPGKRRSQSL
SALPKDDKTSPGKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYAL
GPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEGRGVPGGKDIRERSMSETTEP
PSVSMGMELKGVGPGMVSVSERGGGEGHGQLPRPRAFSQSAMHNLERSERGNPQALAELA
QMCGDGGQVAGRGALSQTQRGVSEDMTSDDERMVICEEEGDDDVIEDSYPGSSIDLKCKE
RVTDSDSENGSGDEGERKRVFAPVICSSSYGPGHGRSVSLSSYPTSRRFSDTSSKRKRTM
EGGDGERREGEGGVSQSSGGQSILVSSGGGVSSVLGAVRVASTVVTNVVRPVVSTPVPIA
SKSPHERKPAPPQTQLLIGPGATGNTATASAGGGGYYSSSSPNPVSASAGQGGLVTNLVL
GGTFQAPPTVQLVTPPPPQNPASPASAPLTHSNGPLPLPVLQSHILPSASLGPSSGQKPI
TQVQYILPTLSANNPKSPSPQQASQPTSIFTLPTALPTHASLANGKQSGYVSSPAVGVVS
PGARVQTQSPVLQGKMLVPMATVRAAPAPSQQFPLVAPPLPVQNGAQAGSKIIQIAPMPV
VQSQLPSTGPVQPGSPFSVTMGTATVVAPGSTPSQTVLLPPPPTRITYVQSTPGVPSPLP
LVSTTTGSSSQTASAAPGSAYVQSPLATFAAIAHPGQTLVQPLIAGQPSLLAPAQSPSAP
HAPAITAIYTPTNVTLATGVVSMATVSPSVVYTVSSSSGLSSHILPKHTTTNSMTSVTSD
RQGNVSAHSERQLHQERTLDRQHTDSPGYTQSSERQTEKVSLLQPDKQFQVPSKGGSSSV
APSQGTSVPLQPGSPAQPSHSGSAPGTPKLIAARPPQKVKATVANIPVGSYDGGGRGKER
DKERDREKEREREKDKESGSRFSFEIDKAAETSSPATLPPEEGSTEAPTHSVAESGTYSG
RGKEANAKEADWKDSHPSSPLPPPSGSDPAPTQSHGDKDAPPKKVKARPPPLKRPFDSVD
KVLSEVYFEERFAELPEFRPEEVLPSPTLQSLATSPRAILGSYRRKRKNSTGENLDSSTE
DPISPKRKSRRRSSCSSEPNTPKSAAKCEGDIFTFDRPDGEDILGELEFDKVPYSSLRRT
LDQRRALVMQLFQEHGFFPSAQSTAAFQARYADIFPTKVCLQLKIREVRQKIMQTAAPSE
SAGISDLSSLPGPSGAAASDIAVGADPQEKEAEREGEQNSPEDPRNAGDSQDSTR
NT seq
7908 nt
NT seq
+upstream
nt +downstream
nt
atgaggccaccaaagaaacagagaggacgctctcctttatcgacaagagcaaaaggagca
agaaaacgagggggtaaacctgaaggacattcacaaacaacaccgcctgcaccttcacat
cagaaatacactccatccaaagaagatagctctcaggacaagcatatcaacagtagcaac
atatcaaacagtgaggggttaaataagcaaataagagaaaggacaatggaaacatccaaa
tctgaagaaaatgcagtaattgtgaataaagcaaaaagccccaggaacattaacgctaac
aatttaacagataatacagactcaatcaagatagccagcaatgcacatgaaaatttacac
agtaatagcacagacatctgtaacacaaacacacaagactttactagcacaaacagtaaa
ggtagcaaccaacatgcaaacagcgctcctagcaatacacaaaacaccaataatacagct
aacagtttaaataaaagcaactctttcagtgccaaccacacttccaccacaccctccagt
cgaaaaacagccactttcaaagccagggtgcccaagaagaaatacatgtatgaacatcaa
gcttccagtacctctcccatcagttcgatacctgtagcccaactcgctcttcatagcaat
cacagcaatcctctatgttctccacacaactccatttctcagagctctactcccgtggtc
agagatgatttggttaaagcagattctgatctggacaatagtgagaatagtaggagagaa
atgggtaaaatagcaagcacagaagctccaaaaggagacagaactaagggtgatatgttg
aaaagtgaggtaccttctgaaagagaaaaggtgatccaagcagtggaagtagatggatat
ggggagcaagccccaaattctgtgcgctcatcatccacagacacagccagtgaacattca
gtggatctggaagtacctgagccctcttgtgtgcagctaaatacaggtaaccacgtaaga
agattcaacctgtccaacaattcaaccctgtctgtcctcctgtcccccaatcacacacaa
actgagcagagagggtctgcaacaatagcagaagcactagctaaaggactgaaaaaccaa
agggtgctagcacgtagacgaccaagaagaaatttaaaggaagacaagaagctgatcaag
gaatgtgtatttatttgtggtgtggtgcgtgggtccagtagagagcagctgaatgtagag
ttgcagattaatggggaggggacactgcactcatatccatttcatactttagtaagtcgc
ccacaccaacccattgacctcattttagacgccccacccccaggaaatgaacttgtggag
gttgggacgcgtgtttgtgtgccttatggaggagataatgatagggagtgctacagagaa
ggtgtggttgctcaggtagactctcattcagcttgcccctacatggtgcttttgcaggag
gagttggaccaggagaaggagaggtgtagcaatgaggagacgcaacagacatcaagtaca
cggactgtatgcgttgcccgccagaacttgcgtctccttgttccgccatgggatggggtt
atgagagagaaagaaagagaggagagagagcacagagaggagatagaagtggagagggaa
ctatgtcagttaagtgagggaatggatatggtaactgcaggtactcccagggacaactgc
agatttccatctccacacacaggggttcatcactatggaagcacacatctttcatcttcc
acttcaccagcagttgtgatggtagcaaacaatatgtttactttagcagctaggacggag
gatgagggaactgggaatagagaaagagttagagaaagagaacatgagcgaaagcaattg
cagactccagaggtggacatggaggttttgcgacttaacatggcaccactcagagatgat
ggaggacacttagtctcagggggaccaaaagcatgtgcgcctaatcagcacagacaaatt
ttctccaaacctcctgggtatccaagtcccattacagtggtgcgaggcatctccgggaca
tctttaggaagtccacagccaaccccttcacctgcaattttagggtctgatggagggatc
tctcaccctatgccaccctctgtgcctccttcccccagctccaggggttctctgacacct
ctggaaaagactcctacaccttcacagacctccaccccaataccagggagttctgcctct
tcttctgcttcttcctcaagatcaaggacacctttgtcagctgcccaacagaaatacaag
aaaggcgatgttgtttgtacacctaatggaatccgtaagaagttcaatggaaagcagtgg
cggcgtctgtgctcacgagaaggctgcatgaaagagtcccagcgtcgtggctactgttct
cgtcacctctccatgcgtaccaaagaaatggagggagcagtgggagagagagggagtgga
ggaggtggagagagtagctcagggaccgtgaccccttcagatctgcggggtcgtgctagc
agtgaatttgattgggatgagacttctcgtgacagtagtgagacaagcagccgaggtact
gactctcgcccacgtcttggcttgccatcactggtttctcaagattactctcgttttgac
tttgatgaatgtgaggctgcaactatgctggtatccctgggctcaaggtctgtaacaccc
tcatactcaccaatttcaaatcagtccccattctcacctacaccttccccatcagcatca
ccactttttggctttcaccctgcaaatttcagtcctattactgcctctccagtcttgcct
cctcgccgccacaaacacccaagtggtaccaacagtggtgtcccaaaacatggaacagga
ggcacagagagggagaaagacagacacttgtctggtattgtgccatccttccacaccagt
ctaaccttcactgtacctatgagcccaggcaaacgcaggacggatgccccacctccccca
actccattgtcacaggaatatgccaaacctgatcaggaacaaagctctcgtgactcttcg
cttgtaacaaatctctgcattatctctcctcagaccactactgtcacacacccccaaaga
ctgccttcaaccactgcctcttccccaccagcttctcccctaagcttagaatcaggttca
caatgtacagtgtcccagcagcctttgagagactctccagtaatagtgagaaatcctgag
gttcctttaataaagtttacagaactcccactggctagagttgcagcggtggacaggacc
aattccacagaaaacagccaaactggtgtacatccagagacaggactacaggttcctgtt
ccaattaacgctgcttccactaacggatctgtcttactgcagaatcccacctcaactctt
gttctagtgtctactacctcttccattccaaacccaacccctgcaggtctacctacgcaa
tccagcgccactttagcctgcatatcagtgcctagccctgtcccagggcctggtctcatt
ggtgcgggtgatggagggggacaagataagagtgccccagtgacgctgcagcagcctgtc
ccttgtcatcctgctcctactgccctgctgccgctcatacttcccacagagaccttgcat
cctgtgccatgcaaagacatcataatgggacgacctggaactgtgtggactaatgttgag
cccagatcggttccagtgtttccttggcattcattggtccctttcctggcacccacccaa
tcagatccatcggctcaacctggtgagggccaacaaactgtcagtcatccccagacagct
tctctgaagaaagagtctcagagcgggtcagtgctgaaggagattatagagggagcacat
aacccttcctcacgccccactccctccgctgatgaactgcccccggagagagagaaggat
gcggagcgagagagacctgacagtgaaacagaaagtgacgtggatgatccgtttttcccc
ggtgttcttcctgatccgccaatttctgcgtctcctggaaagcgtagatctcagtccctc
agtgcactgcccaaagatgacaaaaccagtcctggcaagagggagaaagaccacatccgg
agacccatgaacgcatttatgatcttcagcaagcggcaccgtgcactggttcaccagaga
cacccaaaccaggacaaccgcaccgtcagtaaaatacttggagagtggtggtatgccttg
gggcccaaagaaaaacaaaaataccacgacctcgcatttcaggtgaaggaggcacacttt
aaggcacatcctgactggaaatggtgtaataaggacagaaagaaatccagcagcgaggga
cgtggtgttccagggggcaaagacatccgcgagaggagcatgtcagaaaccacagaacct
ccgtctgtgtcaatggggatggagcttaaaggtgtggggcccggcatggtgagcgtgtca
gagcgaggtggaggtgagggacatggtcaattgccccgtcctcgtgccttctctcagagc
gccatgcacaatctggagaggagcgagagaggcaatccacaggcactcgctgagctggca
cagatgtgtggggatggtggtcaggttgcagggcggggtgctctctctcagacacagagg
ggggtgagtgaggacatgacaagtgacgatgagcgtatggtcatctgtgaagaagagggg
gatgatgacgtcattgaggactcatatccgggtagctccattgacctgaagtgtaaggag
agggtgacagacagtgacagtgaaaatggatccggagatgaaggagaacgcaagagagtt
tttgctccagtgatttgctcctcgtcttacggccctggtcatggtcggagcgtgtctctc
tcctcctaccccacttctagacgctttagcgacacttcctcgaaaagaaaacgaacaatg
gagggaggtgatggagagcgaagggaaggtgaaggaggtgtgtcccagtcttctggaggt
cagtccatcctggtcagttctggcgggggagtgtcatcagttctaggagcggtgagagtg
gcgtccactgtcgtcactaatgtggtgcgtcctgtggtcagcacaccagtgccaatcgcc
agcaagtccccacatgaaaggaaacctgctccgccccagacacagcttctcatcggccct
ggtgccacaggaaacacagcaacagcttcagctggagggggtgggtactattcctcatca
tcgcccaatcctgttagtgcatcagcaggtcaaggggggctggtgaccaatctagttttg
ggaggcacattccaggctccacccactgtacagcttgtcacacctcctcctccacaaaac
ccagcctccccagcatcggccccgcttactcatagtaacggtccgctgcctctgcccgtg
ctgcagtcacacattctcccctccgcctcattagggccctcgtcaggccaaaaaccgata
acacaggtccagtacattctccctaccctctctgccaacaatcccaagagcccctctcct
cagcaggccagtcagccaaccagtatcttcaccttacccacagctctgcccactcacgcc
tcactggccaacgggaagcagtcggggtacgtctctagtcctgctgtgggagtggttagc
ccaggagccagagtgcaaacacagtcaccagtcttgcagggcaagatgctggttcccatg
gcaacagtgagggctgctcctgccccctctcagcagtttcccttggtagcccctcctctt
cctgttcagaatggagcacaggcaggaagcaagattattcagattgctccgatgcctgtc
gtccagtcacaactcccctctacgggaccagtgcaacctgggagccctttttctgttact
atgggaacagctacagtggtcgccccaggctctaccccgtctcagaccgtgctgctaccg
cccccaccaacaagaatcacttatgtacagtccactcctggggttccttctcctctgcca
ttagtttccaccacaacaggctcctcttctcagacagcttcagcagcacctggatctgct
tatgtgcagtcacccttggcgacctttgcagcgatcgctcatccaggacaaactttggtg
cagccactgattgcaggtcagccatcgctgctggccccagcacagtctcccagtgcccct
cacgctcctgccatcaccgccatctacacccctacaaatgtgaccttggcaactggtgtg
gtgtctatggcgacagtgtcaccaagtgtggtgtacacggtgtccagttcctctggccta
tcttcacacatccttcctaaacacaccacaactaactccatgacctctgtaacctcggat
aggcaggggaacgtatctgcacattctgagagacagttgcaccaggagagaacactggac
cggcagcacacagacagtccgggctacacacagtcctctgagagacagacagagaaggtc
tctctcttacagccagacaaacagttccaggtcccgagtaagggcggtagcagctcagtt
gcgccttcacagggcacctcagtgccactgcagcctggaagccctgctcaaccctcacat
tctggcagtgctccggggacacccaaactgatcgcagcaaggcctcctcagaaagtgaaa
gccacagtggccaacatccctgtgggcagttatgatggaggagggagaggcaaagaacga
gacaaggagagggacagggagaaagagagagagcgagagaaggacaaagagagtggtagt
cggttctcatttgagatagacaaggcagctgagacgagttccccagcaacgcttccacca
gaggaggggtccactgaagcccccacccactctgtagcggaaagtggtacctatagtgga
cgtggcaaagaagcaaacgctaaggaggctgattggaaggactcccacccttcttctcca
ttacctcctccctctggatcagatcctgccccaactcagtctcatggtgataaagatgca
ccacctaaaaaagtcaaggcccgccccccaccactcaaacgaccatttgattctgttgac
aaggtcctgtcagaggtgtactttgaggagcgctttgcagagctgccagagttccgtcca
gaggaggttctgccctctccaaccctacagagtctggccacctccccacgagccatactg
ggcagctaccgcaggaagaggaaaaactccaccggtgagaacctggactcgtccacagaa
gatcctatctctccaaaaaggaaaagccgccgcagatctagctgcagttcagagcccaac
acacctaaaagcgctgcaaagtgtgagggggacattttcacctttgataggccagatgga
gaggatatactgggggagctggagtttgataaggtgccctactcctctctcaggcgaact
cttgatcagaggagagctcttgtcatgcagctattccaggaacatggcttcttcccttca
gctcaatctactgctgcgttccaggcgcgatacgctgatatcttccccactaaagtgtgc
ttacagctcaaaatccgtgaggtccggcaaaagatcatgcaaacggcagctccatcggaa
tcggccggcatttcagatctttcctcgttaccgggaccttctggggcggcagccagtgac
atagctgtaggggcagaccctcaggaaaaagaggccgagcgagagggtgagcagaacagc
ccggaggatcccagaaacgctggcgactcacaggactccaccagatga
DBGET
integrated database retrieval system
