Ctenopharyngodon idella (grass carp): 127497682
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Entry
127497682 CDS
T08802
Name
(RefSeq) tumor necrosis factor receptor superfamily member 16 isoform X1
KO
K02583
tumor necrosis factor receptor superfamily member 16
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
cide04010
MAPK signaling pathway
cide04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
127497682
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127497682
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
127497682
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cide04050
]
127497682
04090 CD molecules [BR:
cide04090
]
127497682
Cytokine receptors [BR:
cide04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
127497682
CD molecules [BR:
cide04090
]
Proteins
127497682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
TNFR_16_TM
bDLD3
EAD1
Motif
Other DBs
NCBI-GeneID:
127497682
NCBI-ProteinID:
XP_051722306
LinkDB
All DBs
Position
16:13633450..13647316
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AA seq
418 aa
AA seq
DB search
MKGAKGAMAAALQLCLCILAVKVAFGNDCTSEQFTNSGECCSMCAAGTGLATSCGQEDTK
CQPCQDGVSFSDSESLSACRLCVRCPPGIPELARCTPTLDTHCDCGEGFFLWREHNSTSG
LCAACSMCGYGSGVVQQCGRLGNTICEQCKPGTYSRERSNRKPCVPCSRCSKDEVEIRSC
QPDSDTVCMVKDLNILSRPSGSDGPREFPRWPTMSDETENRSSPAPGSGSTRITPQDQGG
NNNNILVYVSVLAAVVLGLLLYVAYKCWKSCQQKQALVKARVGELNNAGEGEKLHSDSGV
FLDSHSLQENQPSKGSKRDSKQDTRLYVNLPPHRQEEVEGLLAEGGSRSWRQLAATLGYE
QDRVDVFGRGQDPIHTLLTDWAQQEGSTLGLLCSALARIERPDIITALTATSQGVSVV
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaagggagcgaagggagcgatggcagcagcacttcaactctgtttgtgtatcttggcc
gtaaaggtggcttttggcaatgactgtaccagtgagcagttcacaaactcaggcgaatgt
tgcagcatgtgtgctgcgggcactggcttggcaaccagctgtggccaggaagacaccaag
tgtcagccgtgtcaagatggtgtgtcgttttctgactctgagagtctttcagcctgtcgg
ctgtgcgtccgctgcccccccgggattcctgagctggcacgctgcactcccactctggat
acccattgtgattgcggtgagggtttcttcctgtggcgggaacataacagcacaagtggg
ctgtgcgcggcctgctccatgtgtgggtatggaagtggagtcgttcagcaatgcgggagg
ctgggaaataccatatgtgagcagtgtaaaccagggacttactcaagagagcggagcaac
aggaaaccctgcgtgccctgctcacgctgtagtaaagacgaggtggagatcagatcctgc
cagccggactctgacaccgtctgtatggtgaaagatctcaacatcctgtcccggccatct
ggttctgatggtccgcgggaattcccccgatggccgactatgagtgacgaaacagagaac
aggagcagcccagcaccagggtccggatccactcgaatcacaccacaggaccaagggggc
aacaacaacaacatcctggtctacgtgtctgtactggctgcagtggtgctcggcctgctg
ctctacgttgcctacaaatgctggaagtcatgtcagcagaagcaggctctggtgaaagca
cgggttggcgagttgaataatgccggggaaggagagaaattacacagcgacagtggcgtg
ttcctggactctcacagccttcaggaaaaccagcccagcaaaggcagtaaacgggacagc
aaacaggacacgcggctttatgtaaacctgcctccccacaggcaggaggaggtagagggg
cttctcgcagaggggggcagtcggagctggaggcagctggccgccacactcggttacgag
caggaccgcgtggacgtctttggacggggccaggaccccatccacaccctcttaactgat
tgggcccaacaggaagggtccacgttgggcctgctctgctccgccctggcacgcatcgag
cggccggacatcatcaccgccctcaccgccacatctcaaggagtgtcagtggtctga
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