Ctenopharyngodon idella (grass carp): 127497742
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Entry
127497742 CDS
T08802
Name
(RefSeq) iroquois-class homeodomain protein IRX-2a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127497742
Transcription factors [BR:
cide03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
127497742
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
127497742
NCBI-ProteinID:
XP_051722395
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Position
16:6346929..6369819
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AA seq
481 aa
AA seq
DB search
MSYPQGYLYQPPGSLALYSCPLAAPRSEELARSSSGSAFSPYPGSAAFTATANGFSSPLP
YSTDPATGFPSYMGSPYDAHTTGMAGAISYHPYGSPGYPYQLNDPAYRKNATRDATATLK
AWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNKSEDED
EDDGDGERKDERTDKNMDNSEASAEDEGISLHVDALTDHSCSVESDGEKVTCRTGDLVCD
SGPDTKDKCDASDLDTGREERQRGPSPKPVTSSPLTGVEAPLLTHHHREDTRNSSNKTCL
DGQNQTVKPKLWSLAEIATSDPKQHQQQQQHLGQNCPPGVGLLTSTAPSASPAGAVYPAT
SILGRPLYYTSPFYSNYTNYGNFSPLQGQGILRYNSAGEGLLHKQSGDPLLKTNPNQTEQ
HFRASNAESKKATSLLFSDDVFTGTRAGQPVTHMRSTNSKPQPSNQFTLDKIKSRPTFFL
V
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagggttacctctaccagcccccgggctctctggcgctgtactcctgt
ccgctggccgccccgaggagtgaggagctggcccggtcctcgtccggttcagcgttcagc
ccgtaccccggatcagctgcattcacagccacggccaacggattctccagccctctgccc
tactcaacagatccggccacgggattcccgtcctacatggggtctccgtatgacgcgcac
actacggggatggcaggagccataagttatcacccgtacgggagtcccggttacccgtac
cagctaaacgatcccgcttaccgaaaaaatgccacgcgggacgcgacagcgacgttaaaa
gcgtggctgcaggaacacaggaaaaacccttatcccacgaaaggagaaaaaattatgctg
gccatcatcacgaaaatgaccctcacgcaagtgtccacctggttcgctaatgccagacgg
agactcaagaaggagaacaaaatgacatgggcacctcggaataaaagtgaagacgaggat
gaggacgacggcgatggagagagaaaagacgagcgcacggataaaaacatggacaacagc
gaagcgtctgcggaggacgaaggcatcagtttgcacgtcgatgccctgacagatcactcc
tgctcagtggaatcggacggagagaaggtcacgtgtaggaccggagacctggtttgtgat
tctggacctgataccaaggacaaatgcgacgcgagcgatctcgacacgggccgcgaggag
aggcaaagaggcccgtcacccaagcctgtgacctcttcccctctgactggggtggaggcc
cctctcttgacccatcatcaccgagaggacacccgaaacagcagcaacaaaacatgcctg
gacggtcaaaaccaaaccgtcaaacctaaactatggtcattagccgagatcgccacttcg
gacccaaagcagcatcagcagcagcagcagcacttgggacagaactgtcccccgggcgtt
ggccttttgacctccacggcgcccagcgcgtccccggcgggagcagtctaccccgccacc
tccatattaggaagacctctttattacacctcgccgttttatagtaattacacaaactat
ggcaacttcagcccgctgcagggccaagggatactgcgctataattcagctggcgaggga
cttctgcacaaacaaagtggcgaccccctactaaagactaatccaaaccagactgaacaa
catttcagggcctccaatgcagaatccaaaaaagcgacatctcttctcttctctgatgat
gtgtttactggtacgagggcggggcaacctgtcactcacatgagatcaaccaatagcaaa
ccacaaccatccaatcaattcacattggacaaaatcaagtcccgccctacattttttctt
gtttga
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integrated database retrieval system
