Ctenopharyngodon idella (grass carp): 127497762
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Entry
127497762 CDS
T08802
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127497762
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
127497762
NCBI-ProteinID:
XP_051722454
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All DBs
Position
16:13997938..14039427
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AA seq
515 aa
AA seq
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MAVCGNRVQKSACLEVLVRERWHAVLASLSDESLTLSCEEPAADTSVNLNGITTNGSYDQ
PDPTNSPKAGVWTPFTDSQVPEAIANRKRCVKVIKQEVGGLGISIKGGKENKMPILISKI
FKGLAADQTQALYVGDAILSVNGINLRDATHDEAVQVLKKAGKEVMLEVKYMREATPYVK
KGSPVSEIGWETPPPESPRLGSPHFDVPSPPSLSLQGDRRYIPLKMCYITRSMTVPDPEN
RQIELHSSDAKHTIVMRHKDTASAQTWFTLMQTAITNLTSQVISELREHASRHGIAGSRE
IRHFGWLAEKTESERQRWKPVLVMLTEKDLLLFDSMPRMREHWLSPTHTYPLLATRLVHS
GPDKGSPQPGGELSFATRTGTRLGIEAHLFRAETCKDLSLWTRHIVTGCHASAEMIKEVT
TSCMYQGQDCRLVIHYERGFSVIADGEDSSLAQPLFSYPFEKLKMSADDGVRILYLDFGG
NEGEIQLDLHSCPKPIVFILHSFLSAKIARLGLVA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttgtggtaacagagtgcagaaaagtgcatgtttggaggtgctcgtacgggag
cgatggcacgcggtgctggcgagtttaagcgacgagtcgctgacgctcagctgcgaggag
cccgcggcagacaccagcgttaacctgaacggcatcaccaccaacggctcctacgaccag
ccggaccccacgaacagtcccaaagccggagtatggactccttttacggattcacaagtg
cccgaagcgattgcgaaccgcaaaagatgtgtcaaagttatcaaacaggaggtcggtgga
ttagggataagcatcaaaggcggaaaggagaacaagatgcctattcttattagtaaaata
ttcaaaggtctggctgcggatcagactcaagcgctctacgtgggggacgcgatactgtcc
gtgaacgggatcaatctgcgggacgccactcacgacgaggcggtgcaggtgctgaagaaa
gcaggcaaagaagttatgctggaagtgaaatacatgcgggaagcaacaccatatgtgaaa
aaaggctcaccggtgtctgagatcggctgggagacgccccctcctgagtcccctcgtctc
ggcagtcctcacttcgatgtccccagccccccctcgctgtccttacagggcgaccgcaga
tacatccccctcaaaatgtgctacatcacccgcagtatgactgtccctgacccagaaaac
aggcagatagagctgcactcctctgacgccaagcacacaatagtcatgagacataaagac
acagcttctgcccagacctggttcactctcatgcaaactgccatcacaaacctcaccagc
caagtcatcagtgaactccgagaacacgcaagccgacacggcatcgccgggagtcgagag
atccgacacttcggctggctagcggaaaagacggaaagtgaaagacagcgatggaagccg
gtgctcgtgatgttgacggagaaagacctgctgctgtttgacagtatgccacgcatgaga
gaacactggctcagcccgacacacacctaccctctgctcgccacacggctggtgcattct
ggtccagataagggttcaccacagcctggtggcgagttgtcctttgctacacgaacagga
accagattgggtatcgaagcccacctcttcagagcagagacctgcaaggacctgtcactc
tggaccagacacatagtcactggctgccacgcatctgccgagatgatcaaagaagtcact
accagttgtatgtatcagggtcaggactgccggttggtcattcactatgagcgaggtttc
tctgtcatagctgatggagaggacagctctctggcacagccgcttttcagctacccgttt
gaaaagctgaagatgtcggctgacgacggcgtacggatcctctatttggatttcggtggg
aacgagggtgaaattcaactggacttgcactcctgtcccaagcctattgtttttatcctc
cactccttcctttcagccaagattgcaagattaggattggtagcctga
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