Ctenopharyngodon idella (grass carp): 127497766
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Entry
127497766 CDS
T08802
Name
(RefSeq) iroquois-class homeodomain protein IRX-1a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127497766
Transcription factors [BR:
cide03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
127497766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Dicty_REP
Motif
Other DBs
NCBI-GeneID:
127497766
NCBI-ProteinID:
XP_051722460
LinkDB
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Position
16:complement(6140439..6145128)
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AA seq
454 aa
AA seq
DB search
MSFPQLGYPQYLSASQAVYGGDRPGVLTPSSRGGSAEIGGSASAAAAAVSSVLGMYPYAH
NYSAFLPYTSADLALFSQMGSQYDLKDSPGVHPASFAAHTSPAFYPYGQFQYGDPARPKN
ATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTW
GARSKEDEDGNIFGSDNEGDAEKNEDEEEIDLESIDIDKIDDNDGDQSNEEDEEKRGELE
SLQEKRRALALEAHEAYEKSKSNVISAGKEPSDANNNTRVLSPGRQGGFQVPISNKPKIW
SLAETATSPDSSQKPTSPSVPATPAGTHPAFLPSHGLYTCQIGKFHNWTNGAFLGQNSLL
NVRSFLGVNQHHHNHPVHSQQQQQQPSSVVVSSMAAVNSEKAPEDLSPKHIDRENVLRNE
SPTQPLKSSFRPLHDSPRNQQESTQRVLTALSSA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccccagctgggttacccgcagtatttaagtgcctcccaggcggtgtacgga
ggcgatcgcccgggagtgctaactccgtcgtcccgcggagggagcgctgagatcggggga
agcgcgtcggcggcggccgctgcggtgtcctcggtgttgggcatgtacccgtacgcacac
aactacagcgcctttctgccttacaccagcgccgatctggctcttttctctcaaatgggc
tctcagtatgatttaaaagacagccctggcgttcaccctgccagctttgctgcccacacg
agccctgccttctatccctacggtcagttccagtatggagaccctgccaggcctaaaaac
gccacacgggagagtaccagcactctgaaggcctggctcaacgagcacaggaaaaacccc
tatcccaccaaaggcgagaagatcatgctagccatcatcaccaagatgaccctcacacaa
gtgtccacctggttcgccaacgccaggcggagactcaagaaggagaacaaggtgacatgg
ggcgccagaagtaaagaggatgaagatggcaatatatttgggagcgataacgagggggac
gccgaaaagaacgaagatgaagaggaaatagatttggagagcatagatatcgacaagatc
gacgacaacgacggagatcaaagcaacgaggaggatgaggaaaagcgcggggagctcgag
agcctgcaggagaagcggcgcgcgcttgcgctggaggctcacgaggcctacgagaaatcc
aaatcaaacgtcatttctgccgggaaagagccgtctgacgcaaacaacaacaccagggtt
ctgtcgccgggtcgacagggaggttttcaagttccaattagcaataagcccaaaatatgg
tcgttagcagaaaccgcgaccagtccagatagctcgcaaaaacctacgtcaccctcagtt
cccgccactcccgcgggcacacacccggccttcctgcccagccacggactgtacacgtgc
cagattgggaagttccacaactggacaaatggcgcgtttctgggccaaaactccctgctg
aacgtccgctctttcttgggcgtcaatcagcatcaccataatcatcctgttcactcgcag
cagcagcagcagcagccctcgtcggtggtggtgtcatctatggcagccgtgaacagtgag
aaggcgccagaggacctgagtccaaaacacatagatcgggaaaatgtcctcagaaatgaa
tcaccaacgcaacctttaaagtcatcgtttcgtcctcttcatgacagcccgagaaaccag
caggaatcaacacagagggtcctaacagctctctcttccgcttga
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