Ctenopharyngodon idella (grass carp): 127497870
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Entry
127497870 CDS
T08802
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127497870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cide03009
]
127497870
Enzymes [BR:
cide01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
127497870
Ribosome biogenesis [BR:
cide03009
]
Eukaryotic type
90S particles
Other 90S particles
127497870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
127497870
NCBI-ProteinID:
XP_051722597
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All DBs
Position
16:11503324..11507342
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AA seq
238 aa
AA seq
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MAARAGDKRGLEHLDEYEPKPAKQQRSLHDQMTEKRLVVVLEGATLETVKVGKTFELLNC
DQHKSMIIKSGRDPGKIRPDITHQCLLMLLDSPLNRAGLLQVYVHTEKNVLIEINPQTRI
PRTFARFCGLMVQLLHKMSVRAADGSQRLLKLIKNPVSDHLPPGCPRFSTSFKAGDAVCP
RTVVPKDGPAAIVIGAFAHGTVNADYTEKTVSISNYPLSAALTCAKMCSAFEEVWGVL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacgcgctggagacaagcgtggtctggagcatttagatgaatatgaaccaaaa
ccggcaaaacagcaaagaagtctgcacgatcagatgacggaaaagcgtcttgttgttgtt
ttagaaggagcgacgcttgaaaccgtaaaggttggaaagacattcgagttgctgaactgt
gatcagcataagagtatgataataaagagtggacgagaccctggaaagattcgccccgat
atcacacatcagtgcctgctgatgttactggacagtcctttgaacagagctggactgctg
caagtgtacgttcacacagagaagaacgttttgatcgagatcaacccacagacaagaatt
cctcgcacctttgcacgattttgtggactcatggtccagctcctgcacaagatgagtgtg
agagcagctgatggctctcaacgtttgttgaagctcattaaaaatccagtgtcggaccac
ctgccacctggatgcccccgattttccacatcgttcaaagcaggagatgctgtatgtccc
agaacagtcgtccccaaagatggacctgccgctattgtcattggagcatttgcacatgga
acagtgaatgccgactatacagagaagaccgtgtccatcagtaactatcctttatctgca
gctctgacctgtgccaagatgtgttcagcgtttgaggaggtctggggagtgttatga
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