Ctenopharyngodon idella (grass carp): 127497873
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Entry
127497873 CDS
T08802
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E isoform X1
KO
K06842
semaphorin 6
Organism
cide
Ctenopharyngodon idella (grass carp)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
127497873
NCBI-ProteinID:
XP_051722598
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Position
16:complement(22827813..22982655)
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AA seq
1069 aa
AA seq
DB search
MRLVILGSRPLLALTLTLALTCLKHLCHGATPFPQDLEPISTVGSEHTYLYPSFQGNMSD
NDTARLGLDFQRMLRINHMVYIAARDHVFAINLSASVERIVPQQKLTWKTKDVEKCTVRG
KNSDECYNYIKVLVPRNDETLFACGTNAFNPTCRNYKMSSLEQDGEEVVGQARCPFESRQ
SNVGLFAGGDFYSATMTDFLASDAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIEYGN
YVYFFLSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDSF
FYFDVLQSLTNVMQINHRPAVLGVFTTQANSITGSAVCAFYMDDIEKVFNGKFKEQRNSE
SAWTPVPDEMVPKPRPGSCAGDGPAAGYKSSTNFPDETLTFIKSYPLMDEAVPSVNNRPC
FTRTTSRFKLTQIAVDTAAGPYKNYTVLFLGSENGRVLKILASTHQNSTYSTQVLEDIDV
YNPNKCNVRGEDRRILGLELDKDHHALFVAFSSCVIRVPLSRCSDYGNCKKSCLSSRDPY
CIWLSAGNCATVAPGFKSGFEQYVESGYPQYPDSCHDVLATTRKQNPAVDSAYGKTSPTS
ASTTNQGPALPKVKGVSETGTHPEEGRRGGQGSPDLEPGSVEMEGVRRPPEVDKSNHSVH
YTLLIACVLVAFVLGAFLSGFLVSCYCNHNVNKTKRLSKDPEAPIPHALSLRSLAKLNGL
LESQSKDDKLEVSSPKLYNSFFANGKEQAHRRNAHHAAMTELIHPHHHHSAELSGLPTPD
STPELPIKSMKAFKNQWEKNQNCNNAKEPKSHNMGASRPTTGMQHQIFPFSQGLTNGQVL
GGSAHMEERKVHNAERVVSQPYHCYPHKIVDVTSLDELLKHIHEINVATGKSPTVLTSSM
SANAGQMAFANRVQPQIPETESAPYYSSSTLPRDSLTRRMDVPPEIPPHHQSTLERVSRH
PSQRHSLITTPKMPSGGVVPRQHSFNQRSPHQPLLLSRMNSNGSSSGCDVRHPLIPNGYL
TRQHSYSEQPEVHRGAIVRRTASLKPDVPPKPLFIPASSPVNQAGKFNY
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgaggttggtgattttggggtcgcggcccctcttggccttgaccctcacgctcgccctc
acctgcctaaagcatctgtgccatggtgcgacgccctttcctcaggacctggagcccatc
agcaccgttggtagtgaacacacctacctgtaccccagtttccaggggaacatgtcagat
aacgacactgccagactggggttggattttcagaggatgctgcggattaaccacatggtc
tacattgctgcaagagatcacgtttttgccattaacctcagcgcttcagtggagcgaatc
gtcccccaacagaaactgacatggaagacaaaagatgtggagaaatgcacagtcaggggg
aaaaacagcgatgagtgttacaactacatcaaagtgctggtgccacgtaacgacgaaact
ctctttgcatgtggaaccaatgcgttcaaccccacctgtcgcaactacaagatgtcatct
ctggagcaggatggggaggaggtggtcggtcaagcccgttgccctttcgaatcccgccag
tctaacgttggcctgtttgccggcggtgacttttattcagccacaatgacggattttcta
gcaagtgatgcagtgatttaccgaagtttaggagaaagcagtcctgtcctgcgtactgta
aaatacgactcaaaatggctacgagagcctcatttccttcatgccattgagtacgggaac
tacgtctacttctttctcagtgagattgcagtagagtacaccacccttggcaaggtggtg
ttctctcgagtcgctcgcgtgtgtaagaatgataacggcggttctccgcgggttctagag
cgctactggacttctttcctgaaagcccggttgaactgttcagttccaggtgattcgttc
ttctactttgacgttcttcagtcattaaccaacgtcatgcagatcaaccacaggcctgcg
gtgctaggcgtctttaccactcaagccaacagcatcactggttctgctgtatgtgcattc
tacatggatgacatagagaaagtttttaatggaaagtttaaggagcagcgaaacagcgag
tcagcctggacaccagttcctgatgaaatggtgcccaaaccccggccaggatcttgtgct
ggtgatggccctgctgctggttataagtcctccacaaatttccctgatgaaactcttaca
ttcattaagtcttatccacttatggacgaggccgttccgtctgtcaacaaccgaccctgc
ttcacacgaaccaccagcaggttcaagctgacccagatcgcggtggacacggcagctggc
ccgtataagaactacaccgttctgtttctgggttcagagaatggacgagtcctgaagatt
ctcgccagcacgcaccaaaactccacctacagcacgcaggttttggaagacattgatgtt
tataaccccaacaaatgtaatgtgcgtggtgaggaccggaggatactgggattggagttg
gacaaggaccatcacgccctgtttgtggcattctcaagttgcgtgatccgtgttccactc
agtcgctgttctgactacggcaactgcaaaaagagctgtctgtcctcgcgagacccctac
tgcatctggctgagtgcggggaactgtgccacagtggcgccgggattcaagtctggattt
gaacagtatgtggagagtggatatcctcagtacccagacagctgtcatgatgtgttggcc
acaactcgcaagcagaaccctgcggtggactctgcgtacggaaagacctcacccacaagc
gccagcacaaccaatcaggggccagctctgcctaaagtcaagggtgtctctgagacaggt
acccaccccgaggaggggaggcggggagggcagggttctcctgacttggagccaggcagt
gtggagatggagggagtgcgccgaccccctgaggtagataagtccaaccacagtgttcac
tacactctgctcattgcgtgtgtcctggtggcgtttgtcctgggagctttcctctccgga
ttcctcgtttcctgttactgcaaccacaacgttaacaagaccaagaggctgtcgaaagat
ccagaagcaccgatcccacatgctctatccctgcgcagcctagccaagctaaacggcttg
ctagagagccaaagcaaggatgacaagctggaggtatcctcacccaaactctacaactct
ttctttgctaatggaaaagagcaggcgcatcgcaggaatgcccaccatgctgccatgaca
gagctcattcacccacatcatcaccactctgctgagctctccggccttcccactcctgat
tcgacgccagagctcccaatcaagagtatgaaggcctttaagaaccaatgggagaagaat
caaaactgcaataatgctaaagaacccaagtcccataacatgggagcatctcggccgacc
actgggatgcagcatcagattttccccttctcccaaggactgaccaacggacaggtacta
ggcggctcggcacacatggaggaacgcaaagtccacaacgcagagcgtgtggtaagccag
ccgtatcactgctaccctcacaagattgtggacgtcacttcgctcgacgagcttctgaaa
cacattcacgaaatcaacgtggccacgggcaagagtcccactgtactcacctcttccatg
tcagctaacgccggtcagatggcgttcgcgaatcgcgtacagccacagatcccagaaaca
gagtctgcgccgtactacagttcctccacgcttccacgggacagtctcactcgccgcatg
gacgtcccaccggagattcctccccatcatcagtccaccctggagagagtgtcccgtcac
ccgtcacaacggcactctttgataaccacccccaagatgcccagcgggggcgtggtgcca
cggcagcacagcttcaaccagcgcagccctcatcagcccctcctgctctcccgaatgaac
tctaacggcagcagttcaggttgtgatgtacggcacccgctcatccctaacggataccta
actcgccagcatagctacagcgagcagccggaagtccaccgtggagctattgtccgtcgg
acagcttcgctcaagcctgacgtcccacccaaaccactgttcatccctgctagctcgcct
gtcaaccaggcagggaagttcaactactga
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integrated database retrieval system
