Ctenopharyngodon idella (grass carp): 127497912 Help Entry 127497912         CDS       T08802                                  Name (RefSeq) roquin-1 isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism cide  Ctenopharyngodon idella (grass carp) Brite KEGG Orthology (KO) [BR:cide00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:cide03000]     127497912    04121 Ubiquitin system [BR:cide04121]     127497912 Transcription factors [BR:cide03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     127497912 Ubiquitin system [BR:cide04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     127497912 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 zf-C3HC4_3 zf-C3HC4 zf-CCCH zf-C3HC4_2 zf-CCCH_4 zf-CCCH_UNK Prok-RING_4 zf_CCCH_4 FYVE DUF2570 NS3_helicase_C Baculo_IE-1 RING_XB3-XBAT31 zf-RING_6 Motif Other DBs NCBI-GeneID:  127497912 NCBI-ProteinID:  XP_051722694 LinkDB All DBs Position 2:complement(21612546..21637401) Genome browser AA seq 1114 aa AA seqDB search MPVQAPQWTEFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHRKACPFDQTAINTD IEQLPVNSALLQLVGGQVPKQQPVALITCPEDTKHYDEARQCVEELALYLKPLSSARGVG LSNAAQSMLSRPMQRKLVTLVHCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLS SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEGGLRIAP DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL ANIDPSPDAPPPTWEQLEKGLVAVKTVVHGLVDFIQNHSKKGADTQQPPQHSKYKTYMCR DMKQKGGCPRGASCTFAHSQEELEKYRKMNKRLAARVPCTPGLLPEEVVPLEPGRKASTL TNGIVAGPGTPLPQLIPRGTDPSTYDLLLKPKMDATSLSAPGSPPDSLDKSGLTLTPHPV PHSRAEHLPMPKQVPVVHRGAPQMYSQQQTELFYPEPARPPASGSQYDTPYPAGNPYPYQ PPQYVPPRYIRNPPPPGESAVPPYTEPYPGYGPESQYQGHHPGPPFSAHTYAPPPHYSRR HGHYPTPPPPFAPPRDDLVRMSPVPLDVPPTAMPPPPAGAAGSLYHPQETSSRDRYPSDG YYPAGPHHSQMRSHIRQDPYSRSQPSLDDLHRRRKELLVQLEERKVISPPPFAASPTLPT HPFPNDYPQEYLEDGSKAFGSREPDYAGQYSPWSCDTIGSYIGSKDAKPKDVSSAVEMMN AEGKVLREPPLDTQRRSAEAKDDDPIIPFGPLPTVSPFGAISRTSKTGYQTTGPVQAMAS SQASGSKHMTMTADYPYGSHSGWGGSSYPQHQSINSQGHFNERLPMSAPDREQLKIELQQ VNQQISQQTRGMEAASNSMLLQREACALASQPTAGVKWSSGGTVSSEQLSLELHHVEREI GKRTREIAMENQVAHEYKLKATENGQPDHKAQLEELSLALGEVSNGSSGMKPASSMGGSM LSLTNKTSSLTLCSADQAASSSDLQKNGVVHSCS NT seq 3345 nt NT seq  +upstreamnt  +downstreamnt atgcctgtacaagctccacaatggacagagtttttactgtgccccatatgcacccagacg ttcgaggagacggtgcgccggcccatcagtctgggttgcggccacactgtttgcaagatg tgcctcaacaagctgcaccgcaaggcctgtccctttgatcagacggccatcaacactgac atcgagcagctgcccgtcaactcggccctgctacagctggtcgggggtcaggtgcccaaa cagcaacctgtggcactcattacgtgtccagaggacaccaagcattatgatgaggctcgg cagtgcgttgaggagctggccctctacctcaaacccctcagcagtgcacgaggagtgggg ttgagtaatgctgctcagagcatgctgagtcgccccatgcagaggaagctggtgactctg gtgcactgtcagctggtggaagaggaaggacgggtcagagccatgcgggcggcccgctcg ttgggcgaaagaactgttacggagctcattctgcagcaccaaaacccccagcagctctcc tccaacctgtgggctgccgtgagagccagaggttgccagtttctgggccccgccatgcag gaggaggcactaaagctggtgctgttggccttggaagatggatccgctctttctaggaag gttctggtcctctttgtggtccagagacttgaaccgagatttcctcaggcctccaaaacc agtattgggcatgtagttcagctcctctaccgtgcctcctgtttcaaggtgactaagaga gatgaggattcatcgctaatgcagttgaaagaggagttccgcacgtacgaggcacttcgg agggaacacgactctcaaatcgttcaaatcgcaatggagggagggctccgcatcgcccct gatcagtggtcttctctgctgtatggagatcagtctcataaatcacacatgcagtccatc attgacaagctgcagactccagcgtcatttgctcagagcgtgcaggagctgaccatcgca ctgcagaggacgggtgaccctgccaatctcaaccggctaagacctcacctcgagttgctc gctaacatcgaccccagtccagatgctcctcctcctacctgggagcagctagagaagggg ctggtggcggtaaagacggtggtgcacggcctagtggacttcatccagaaccacagcaag aagggtgctgacacgcagcagccaccccagcacagcaaatacaagacatacatgtgcaga gacatgaagcaaaaaggaggctgtcccagaggagctagctgcacattcgcccactctcag gaggagctggaaaagtaccgtaaaatgaacaaacgtcttgctgcgcgagtgccctgcacc cctggcctgctgcccgaggaggtggtccctctggagcctgggcgaaaggcctctacactt accaacggcattgtagctggtcctgggacgcctcttccccagctcatccccagaggcaca gacccctccacatatgacctcttactcaagcctaagatggatgccactagccttagtgct cctgggtcaccacctgattctttggataaatctggcttgacactgacaccccaccctgtg cctcactccagggcggagcacttacccatgcccaagcaggtgccagttgtgcacagaggt gcaccacagatgtattcgcaacagcagaccgagctcttctatccagagccagccagacct cctgcctcaggatctcagtatgatactccatacccagcaggcaacccctacccataccaa cctcctcagtatgttcctccccgctacatccgtaacccacctcccccgggcgagtctgca gtgccaccttacacagagccctacccaggttacggcccagaaagccaatatcagggccac caccctggtcctcctttctcagcccacacctatgcaccgcccccccattacagtcgcagg catggacactatcccacacccccacctccgtttgcccctcccagagacgacttggtcagg atgagcccggttcctttggacgttcccccgactgctatgcctccgcctccagcaggagct gcaggttctctgtaccacccccaggagacatcatccagagacagatacccatcggacggt tactatcctgctggaccgcaccacagccagatgaggtctcacataagacaggacccatac agccgctctcagcccagtctggatgacttgcatcgcaggcgcaaggagctgcttgtccag ctggaggagagaaaagtcatctcccctccccctttcgctgcctcccccactctccctaca cacccgttccccaacgactaccctcaggagtatttggaggatggctctaaagcctttgga agtcgggagccggactatgctgggcagtattccccctggtcatgtgacaccataggatca tacattggctccaaggatgctaaaccaaaagatgtcagtagtgctgtggagatgatgaat gcagagggaaaagttctgcgtgaacctccactggacacccagcggcgctctgcggaagcc aaagacgacgatcccatcattccctttggtcctctgcccacagtgtctccttttggtgcc atttcacgtacctctaaaacgggttaccagaccactgggcctgtacaggccatggcgtcc tcacaggcctcgggctccaaacacatgactatgacagcagactatccatatggaagccac agcggatggggtggatcgtcctaccctcagcaccagagcatcaactctcagggacacttc aacgagcgtctgcccatgtctgcccctgaccgtgagcagctcaagattgagctccagcaa gtcaaccaacagatcagtcagcagacacgcgggatggaggctgccagtaactccatgctc ctgcagagggaggcgtgtgcgctggcgtctcagcccacggctggggtgaagtggtcttca ggtggcactgtgtccagtgaacagctcagcctggagcttcatcatgtagagcgagagatc ggaaagagaacccgtgaaattgccatggagaaccaggtggcccatgagtacaagctgaag gccactgaaaatgggcagcctgaccataaagcccagctggaggagctctctttagcactg ggtgaggtgtctaatggatccagtggcatgaagccagccagtagtatgggtggatctatg ctctcgctgaccaataagacatcgtctctcaccctctgctccgctgaccaagcggcgagt agctcagaccttcaaaagaacggtgtcgttcactcttgctcttaa

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