KEGG   Ctenopharyngodon idella (grass carp): 127497919
Entry
127497919         CDS       T08802                                 
Name
(RefSeq) nibrin
  KO
K10867  nibrin
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03440  Homologous recombination
cide04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    127497919
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    127497919
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cide03032]
    127497919
   03400 DNA repair and recombination proteins [BR:cide03400]
    127497919
DNA replication proteins [BR:cide03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    127497919
DNA repair and recombination proteins [BR:cide03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     127497919
    BRCA1-C complex
     127497919
SSDB
Motif
Pfam: Nbs1_C NIBRIN_BRCT_II FHA Yop-YscD_cpl BRCT RTT107_BRCT_5 PTCB-BRCT MU2_FHA PCNA_C
Other DBs
NCBI-GeneID: 127497919
NCBI-ProteinID: XP_051722699
LinkDB
Position
16:complement(26392396..26408317)
AA seq 834 aa
MWKLQPTEAGGECIVLLPGQEYVVGRKNCQILLSNDQSISRVHANLTVTEQAVTLKDSSK
YGTFINGEKLETGSTKTLQAGDKITFGVFQSKFSLEKECVVVCSSCVDNEGKASLSQDVR
SIGGRLVNSWTLDCTHLVMPTVKVTIKTICALLCCRPIVKPEFFSVLSKAVQQKLPLPKA
ERFRPQIDEPSLAKEDVDLSARPERKSLFKGKTFLFLNSKQMKRLSQAVSCGGGVCRLLD
EGSLPVSLLESSSTCVVDMTSGNSQAVIPPNSKKWVDSVAQILHRNGLRFITESEIGLAA
IHLNNQTYCNPCSIQSESVKVKPVITAATLSQNTAVDETALAAPSQNITAYVVNTELSQD
QSRMVTSGISAVGETPEKTRPTRKGSTLSTTNKSSSLGPEPSASRVVSETVRSSESFSMV
EPKQRMKKGSAPSGSGQVQLKGSVKMTAPPNGSTTLKQSPQKQTALTNFFQPAGKKRPRE
DSANSVQSETKFLRKDSEDKEDEIQQNSSASRSYKNSHTAQNQHSSVSRSEFSASLGQAC
GSSQSSGSKKRKEPEQDVPSGPEEPAVAADLEMSLEELESIMSDEMDQPPCAAANKKQRL
ESGLNSTINNPQLPNQQEGTESKSRKGTKNQQSTANNIQKLQLDRTGPAATNQGSERQSK
RSPNQTPDLEAHCSANKGKRPELEEVKEEEVSFVVNSRTQNGISQHSEAVAKQEMQASTS
KSGSENDPELPRRLLQVQFKSLTVNTSSRSRPSPLQTHDPNDKNVKRFRKTNVPGFNGLP
NIIGGSDLVAHNRSKNSELEEWLRQAAEEEKQNEREENLGDDLFRYNPKPARKR
NT seq 2505 nt   +upstreamnt  +downstreamnt
atgtggaaactgcaaccaactgaagctggaggggaatgtatcgttctgctcccgggtcag
gagtatgtggtcggccgtaagaattgtcaaattctgttgtccaatgatcagtccatcagt
cgtgtgcatgccaacctcactgtcactgagcaggcggtcactctgaaggacagctctaaa
tacggcactttcatcaatggtgagaagcttgagactggctccacaaagaccctgcaggca
ggagacaaaatcacatttggagtcttccagagcaagttcagtttggagaaagaatgtgtt
gtggtgtgttcctcgtgtgtcgataacgaagggaaagcatccctctctcaagatgtgcgc
tctatcggagggcgacttgtcaactcctggacacttgactgcacgcatctcgtcatgccc
actgtaaaggtcaccattaagacgatctgtgcgttgctgtgctgtcggcctatagtaaaa
cctgaattcttcagtgtgcttagcaaggctgtgcagcagaaactgccactgcctaaagct
gagagatttaggcctcagattgatgagcccagcctggctaaagaggacgtggatctgagt
gcacgacctgagagaaagagcctcttcaaggggaaaacttttctgtttttgaactctaaa
cagatgaagcgtttgagtcaggcagtgagttgtggaggtggggtgtgccggcttttggac
gagggctcactgcccgtttcactcttggagtcgagcagcacttgtgtggttgacatgaca
tcaggaaactcccaggctgtcatccctccaaactccaagaagtgggtggattctgtggcc
cagattctgcacagaaacggcttgcgctttatcacagaatctgagatcggattggctgcc
attcatctcaataatcaaacatactgcaatccctgttctattcaatctgaatctgtgaaa
gtgaagccagtcattactgcagcaacgctttctcagaacactgccgtggatgagacggcg
ctcgcggcaccttcccagaatattacagcctatgtggtcaacactgagctttctcaggac
cagagcaggatggttacaagtgggatcagtgcagttggtgagactcctgagaagacacgt
cccacacggaagggctccacactgtcaacaaccaataaatcctcatccctcggcccggaa
ccttctgcttcccgcgtcgtcagtgagacggtgaggtcatctgagagctttagcatggtt
gagcctaagcagaggatgaagaaaggttctgctccttcgggcagtgggcaagttcagtta
aaaggttctgtgaaaatgacagcgcctcccaatggcagcaccacactaaaacagtccccc
cagaaacagacagccctcacaaacttcttccagcctgccggcaagaaaagaccacgtgaa
gacagtgccaattctgtccagtcagagaccaaattcttaagaaaagacagtgaagataaa
gaagatgagatccagcaaaattcctctgccagtagatcttacaaaaactcacatactgcc
caaaaccaacacagctcagtgtcaagatctgagttcagtgccagtctgggtcaggcttgt
gggtccagtcaaagctctggcagcaaaaagagaaaggaaccagagcaagacgtcccatca
ggaccagaggaacctgcagtagctgctgatttagaaatgtcacttgaagagcttgaatcc
ataatgtccgacgagatggatcagcctccatgtgctgcagctaataaaaagcaacgtctt
gagtcaggactgaacagcacaatcaataacccacaattacccaatcagcaagagggcact
gagtccaaaagcagaaaaggcacaaagaatcagcaaagtactgccaacaacattcagaaa
ttgcagttggacagaacaggcccagctgcaacaaatcagggctctgagaggcagtcaaaa
aggtcacccaatcaaactccagatctggaagcacattgctcagcaaacaaggggaaaaga
ccagaacttgaagaggtcaaagaggaggaagtgtcttttgttgtgaattcaaggactcaa
aatggcatttcccagcacagcgaggctgtagccaaacaggaaatgcaggcctcgacctcc
aaatctggatccgagaatgaccctgagctgcccaggaggctcctacaggttcagtttaag
tccctgacagtgaacacctcttccagatcaagacccagcccactacagacccatgacccc
aatgacaaaaatgtcaaaaggttccgcaagacaaatgtccctggatttaatgggcttccc
aacattatcggaggctcggatctggtggctcacaatcgcagcaagaactctgaactagag
gaatggcttagacaggctgcagaggaggaaaaacagaatgaacgggaggagaatttggga
gatgatttgttcagatacaaccctaaacctgcaaggaaaagatag

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