Ctenopharyngodon idella (grass carp): 127497919
Help
Entry
127497919 CDS
T08802
Name
(RefSeq) nibrin
KO
K10867
nibrin
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03440
Homologous recombination
cide04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127497919
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
127497919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cide03032
]
127497919
03400 DNA repair and recombination proteins [BR:
cide03400
]
127497919
DNA replication proteins [BR:
cide03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
127497919
DNA repair and recombination proteins [BR:
cide03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
127497919
BRCA1-C complex
127497919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
BRCT
RTT107_BRCT_5
PTCB-BRCT
MU2_FHA
PCNA_C
Motif
Other DBs
NCBI-GeneID:
127497919
NCBI-ProteinID:
XP_051722699
LinkDB
All DBs
Position
16:complement(26392396..26408317)
Genome browser
AA seq
834 aa
AA seq
DB search
MWKLQPTEAGGECIVLLPGQEYVVGRKNCQILLSNDQSISRVHANLTVTEQAVTLKDSSK
YGTFINGEKLETGSTKTLQAGDKITFGVFQSKFSLEKECVVVCSSCVDNEGKASLSQDVR
SIGGRLVNSWTLDCTHLVMPTVKVTIKTICALLCCRPIVKPEFFSVLSKAVQQKLPLPKA
ERFRPQIDEPSLAKEDVDLSARPERKSLFKGKTFLFLNSKQMKRLSQAVSCGGGVCRLLD
EGSLPVSLLESSSTCVVDMTSGNSQAVIPPNSKKWVDSVAQILHRNGLRFITESEIGLAA
IHLNNQTYCNPCSIQSESVKVKPVITAATLSQNTAVDETALAAPSQNITAYVVNTELSQD
QSRMVTSGISAVGETPEKTRPTRKGSTLSTTNKSSSLGPEPSASRVVSETVRSSESFSMV
EPKQRMKKGSAPSGSGQVQLKGSVKMTAPPNGSTTLKQSPQKQTALTNFFQPAGKKRPRE
DSANSVQSETKFLRKDSEDKEDEIQQNSSASRSYKNSHTAQNQHSSVSRSEFSASLGQAC
GSSQSSGSKKRKEPEQDVPSGPEEPAVAADLEMSLEELESIMSDEMDQPPCAAANKKQRL
ESGLNSTINNPQLPNQQEGTESKSRKGTKNQQSTANNIQKLQLDRTGPAATNQGSERQSK
RSPNQTPDLEAHCSANKGKRPELEEVKEEEVSFVVNSRTQNGISQHSEAVAKQEMQASTS
KSGSENDPELPRRLLQVQFKSLTVNTSSRSRPSPLQTHDPNDKNVKRFRKTNVPGFNGLP
NIIGGSDLVAHNRSKNSELEEWLRQAAEEEKQNEREENLGDDLFRYNPKPARKR
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaactgcaaccaactgaagctggaggggaatgtatcgttctgctcccgggtcag
gagtatgtggtcggccgtaagaattgtcaaattctgttgtccaatgatcagtccatcagt
cgtgtgcatgccaacctcactgtcactgagcaggcggtcactctgaaggacagctctaaa
tacggcactttcatcaatggtgagaagcttgagactggctccacaaagaccctgcaggca
ggagacaaaatcacatttggagtcttccagagcaagttcagtttggagaaagaatgtgtt
gtggtgtgttcctcgtgtgtcgataacgaagggaaagcatccctctctcaagatgtgcgc
tctatcggagggcgacttgtcaactcctggacacttgactgcacgcatctcgtcatgccc
actgtaaaggtcaccattaagacgatctgtgcgttgctgtgctgtcggcctatagtaaaa
cctgaattcttcagtgtgcttagcaaggctgtgcagcagaaactgccactgcctaaagct
gagagatttaggcctcagattgatgagcccagcctggctaaagaggacgtggatctgagt
gcacgacctgagagaaagagcctcttcaaggggaaaacttttctgtttttgaactctaaa
cagatgaagcgtttgagtcaggcagtgagttgtggaggtggggtgtgccggcttttggac
gagggctcactgcccgtttcactcttggagtcgagcagcacttgtgtggttgacatgaca
tcaggaaactcccaggctgtcatccctccaaactccaagaagtgggtggattctgtggcc
cagattctgcacagaaacggcttgcgctttatcacagaatctgagatcggattggctgcc
attcatctcaataatcaaacatactgcaatccctgttctattcaatctgaatctgtgaaa
gtgaagccagtcattactgcagcaacgctttctcagaacactgccgtggatgagacggcg
ctcgcggcaccttcccagaatattacagcctatgtggtcaacactgagctttctcaggac
cagagcaggatggttacaagtgggatcagtgcagttggtgagactcctgagaagacacgt
cccacacggaagggctccacactgtcaacaaccaataaatcctcatccctcggcccggaa
ccttctgcttcccgcgtcgtcagtgagacggtgaggtcatctgagagctttagcatggtt
gagcctaagcagaggatgaagaaaggttctgctccttcgggcagtgggcaagttcagtta
aaaggttctgtgaaaatgacagcgcctcccaatggcagcaccacactaaaacagtccccc
cagaaacagacagccctcacaaacttcttccagcctgccggcaagaaaagaccacgtgaa
gacagtgccaattctgtccagtcagagaccaaattcttaagaaaagacagtgaagataaa
gaagatgagatccagcaaaattcctctgccagtagatcttacaaaaactcacatactgcc
caaaaccaacacagctcagtgtcaagatctgagttcagtgccagtctgggtcaggcttgt
gggtccagtcaaagctctggcagcaaaaagagaaaggaaccagagcaagacgtcccatca
ggaccagaggaacctgcagtagctgctgatttagaaatgtcacttgaagagcttgaatcc
ataatgtccgacgagatggatcagcctccatgtgctgcagctaataaaaagcaacgtctt
gagtcaggactgaacagcacaatcaataacccacaattacccaatcagcaagagggcact
gagtccaaaagcagaaaaggcacaaagaatcagcaaagtactgccaacaacattcagaaa
ttgcagttggacagaacaggcccagctgcaacaaatcagggctctgagaggcagtcaaaa
aggtcacccaatcaaactccagatctggaagcacattgctcagcaaacaaggggaaaaga
ccagaacttgaagaggtcaaagaggaggaagtgtcttttgttgtgaattcaaggactcaa
aatggcatttcccagcacagcgaggctgtagccaaacaggaaatgcaggcctcgacctcc
aaatctggatccgagaatgaccctgagctgcccaggaggctcctacaggttcagtttaag
tccctgacagtgaacacctcttccagatcaagacccagcccactacagacccatgacccc
aatgacaaaaatgtcaaaaggttccgcaagacaaatgtccctggatttaatgggcttccc
aacattatcggaggctcggatctggtggctcacaatcgcagcaagaactctgaactagag
gaatggcttagacaggctgcagaggaggaaaaacagaatgaacgggaggagaatttggga
gatgatttgttcagatacaaccctaaacctgcaaggaaaagatag
DBGET
integrated database retrieval system