Ctenopharyngodon idella (grass carp): 127497926
Help
Entry
127497926 CDS
T08802
Name
(RefSeq) sorting nexin-27b isoform X1
KO
K17936
sorting nexin-27
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127497926
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cide04990
]
127497926
Membrane trafficking [BR:
cide04131
]
Protein recycling
Others
Others
127497926
Domain-containing proteins not elsewhere classified [BR:
cide04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
127497926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
RA_2
SNX17-27-31_F1_FERM
SNX17_FERM_C
VirE3
USP7_C2
PDZ_2
SNX17-31_F2_FERM
DarA_N
Sina_TRAF
Motif
Other DBs
NCBI-GeneID:
127497926
NCBI-ProteinID:
XP_051722725
LinkDB
All DBs
Position
16:complement(26570596..26588975)
Genome browser
AA seq
569 aa
AA seq
DB search
MADVVEGEGTRSAAPSTLHSAARNGSGMSSGTCAGGLVATTVTSGPRLVRIVKSDSGYGF
NVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGATHK
QVVDLIRAGEKELVLAVLSVPQPETDSLDPGDDGSSQSCYDYSDKQAVPISVPTYKHVEQ
NGEKFVVYNVYMAGRQLCSKRYREFAILHQNLKREFANFAFPKLPGKWPFSLSEQQLDAR
RRGLEEYLEKVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIAMPDKTTVTVRVRKNC
TTDQVYQAVVTKIGMDSITASYFALFEVINHSFARKLAPNEFPHKLYVQNYTSAVPGTCL
TLRKWLFTTEEEILLNDNELAINYCFHQALDDVKKGFIKVGEKSYQLQKLTEQRKMTMYL
SILRTCEGYNEITFPHCSCDSRRKGHVITAISIRHFKLHACTEDGTLENQVIAFEWSEMQ
RWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEATDKD
NKNCSKDEYLPAVETQKGWRHMNEEIISS
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgttgtcgaaggagaaggcactcgctccgctgccccttccacgcttcactcg
gcggctcgcaacggctctggtatgagctcggggacttgcgccggcggcctcgtcgcgacc
acggtcacctccgggcctcggctggtccgcatcgtcaagtcggactcgggctacggcttc
aatgtccgcgggcaagtgagcgaaggagggcagttgaggagcatcaacggcgaactttac
gccccgctgcagcacgtcagcgccgtgttaccgggcggcgcggcagatcgagctggaatc
tcaaagggcgaccgtattcttgaagtaaatggggtaaatgtggaaggggccactcataag
caggtggtggatctcatccgagcaggagagaaagagttggtcttggccgtcctgtcggtt
cctcagccagagacggacagtcttgatcctggggacgatggctcttcgcagtcttgctat
gactacagtgacaagcaggccgtgcccatctccgtgcccacctacaaacatgtggagcag
aatggggagaagtttgttgtctacaatgtgtacatggcaggcaggcagttgtgctcgaag
cgctatcgagagtttgccatcttgcatcagaatctgaagagggagtttgctaactttgca
tttcccaagctcccagggaaatggcctttctccctgtctgagcaacagctagacgctcgc
agacgggggctggaggaatacttggagaaagtatgttctgttcgggtaatcggggagagc
gacatcatgcaggagtttttgtcagagtctgatgagaactataatggtgtttctgatgtg
gagctaaggatagccatgccagacaaaactacagttacagtccgggtgcgaaagaattgc
acaacagaccaggtctaccaggctgtagtaacaaagattgggatggacagcattactgca
agttattttgctctgtttgaagtcattaaccactcctttgcacgcaagctggcccctaat
gagtttccacataagctgtatgtgcagaactacacatctgctgtcccaggcacctgcctc
acgctccgcaagtggctcttcaccacagaggaagagattctactcaatgacaacgagctg
gctatcaactattgcttccatcaggctttggatgatgtgaaaaagggattcatcaaagtg
ggagaaaaatcctaccagctccaaaagctcactgaacagaggaaaatgaccatgtattta
agtattctgaggacatgcgagggctacaatgagatcactttcccgcattgctcctgtgac
tcacgtaggaaaggtcacgtcatcacggcgataagcatccgccactttaagctccatgcg
tgcacagaggatggcactctagagaatcaggtgatagcgttcgaatggtccgagatgcag
agatgggacacggatgaagagggaatggctttctgtttcgagtacgcacgaggggagaag
aagcctcgctgggtcaaaatcttcactccttatttcaactacatgcacgagtgctttgag
agagtcttctgtgagctcaaatggagaaaagaggttgaagaggaggccacggacaaggac
aataaaaactgcagtaaagatgaatatcttccagctgttgagacacagaagggatggagg
cacatgaatgaagagatcatctcctcttga
DBGET
integrated database retrieval system