KEGG   Ctenopharyngodon idella (grass carp): 127497926
Entry
127497926         CDS       T08802                                 
Name
(RefSeq) sorting nexin-27b isoform X1
  KO
K17936  sorting nexin-27
Organism
cide  Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:cide00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cide04131]
    127497926
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:cide04990]
    127497926
Membrane trafficking [BR:cide04131]
 Protein recycling
  Others
   Others
    127497926
Domain-containing proteins not elsewhere classified [BR:cide04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   127497926
SSDB
Motif
Pfam: PX PDZ RA PDZ_6 RA_2 SNX17-27-31_F1_FERM SNX17_FERM_C VirE3 USP7_C2 PDZ_2 SNX17-31_F2_FERM DarA_N Sina_TRAF
Other DBs
NCBI-GeneID: 127497926
NCBI-ProteinID: XP_051722725
LinkDB
Position
16:complement(26570596..26588975)
AA seq 569 aa
MADVVEGEGTRSAAPSTLHSAARNGSGMSSGTCAGGLVATTVTSGPRLVRIVKSDSGYGF
NVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGATHK
QVVDLIRAGEKELVLAVLSVPQPETDSLDPGDDGSSQSCYDYSDKQAVPISVPTYKHVEQ
NGEKFVVYNVYMAGRQLCSKRYREFAILHQNLKREFANFAFPKLPGKWPFSLSEQQLDAR
RRGLEEYLEKVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIAMPDKTTVTVRVRKNC
TTDQVYQAVVTKIGMDSITASYFALFEVINHSFARKLAPNEFPHKLYVQNYTSAVPGTCL
TLRKWLFTTEEEILLNDNELAINYCFHQALDDVKKGFIKVGEKSYQLQKLTEQRKMTMYL
SILRTCEGYNEITFPHCSCDSRRKGHVITAISIRHFKLHACTEDGTLENQVIAFEWSEMQ
RWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEATDKD
NKNCSKDEYLPAVETQKGWRHMNEEIISS
NT seq 1710 nt   +upstreamnt  +downstreamnt
atggcagatgttgtcgaaggagaaggcactcgctccgctgccccttccacgcttcactcg
gcggctcgcaacggctctggtatgagctcggggacttgcgccggcggcctcgtcgcgacc
acggtcacctccgggcctcggctggtccgcatcgtcaagtcggactcgggctacggcttc
aatgtccgcgggcaagtgagcgaaggagggcagttgaggagcatcaacggcgaactttac
gccccgctgcagcacgtcagcgccgtgttaccgggcggcgcggcagatcgagctggaatc
tcaaagggcgaccgtattcttgaagtaaatggggtaaatgtggaaggggccactcataag
caggtggtggatctcatccgagcaggagagaaagagttggtcttggccgtcctgtcggtt
cctcagccagagacggacagtcttgatcctggggacgatggctcttcgcagtcttgctat
gactacagtgacaagcaggccgtgcccatctccgtgcccacctacaaacatgtggagcag
aatggggagaagtttgttgtctacaatgtgtacatggcaggcaggcagttgtgctcgaag
cgctatcgagagtttgccatcttgcatcagaatctgaagagggagtttgctaactttgca
tttcccaagctcccagggaaatggcctttctccctgtctgagcaacagctagacgctcgc
agacgggggctggaggaatacttggagaaagtatgttctgttcgggtaatcggggagagc
gacatcatgcaggagtttttgtcagagtctgatgagaactataatggtgtttctgatgtg
gagctaaggatagccatgccagacaaaactacagttacagtccgggtgcgaaagaattgc
acaacagaccaggtctaccaggctgtagtaacaaagattgggatggacagcattactgca
agttattttgctctgtttgaagtcattaaccactcctttgcacgcaagctggcccctaat
gagtttccacataagctgtatgtgcagaactacacatctgctgtcccaggcacctgcctc
acgctccgcaagtggctcttcaccacagaggaagagattctactcaatgacaacgagctg
gctatcaactattgcttccatcaggctttggatgatgtgaaaaagggattcatcaaagtg
ggagaaaaatcctaccagctccaaaagctcactgaacagaggaaaatgaccatgtattta
agtattctgaggacatgcgagggctacaatgagatcactttcccgcattgctcctgtgac
tcacgtaggaaaggtcacgtcatcacggcgataagcatccgccactttaagctccatgcg
tgcacagaggatggcactctagagaatcaggtgatagcgttcgaatggtccgagatgcag
agatgggacacggatgaagagggaatggctttctgtttcgagtacgcacgaggggagaag
aagcctcgctgggtcaaaatcttcactccttatttcaactacatgcacgagtgctttgag
agagtcttctgtgagctcaaatggagaaaagaggttgaagaggaggccacggacaaggac
aataaaaactgcagtaaagatgaatatcttccagctgttgagacacagaagggatggagg
cacatgaatgaagagatcatctcctcttga

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