Ctenopharyngodon idella (grass carp): 127497960
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Entry
127497960 CDS
T08802
Name
(RefSeq) sodium-dependent dopamine transporter
KO
K05036
solute carrier family 6 (neurotransmitter transporter, dopamine) member 3
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
127497960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cide02000
]
127497960
Transporters [BR:
cide02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
127497960
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
127497960
NCBI-ProteinID:
XP_051722773
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Position
16:6710312..6738944
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AA seq
614 aa
AA seq
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MLRGRLAVTHMSSTIAPVKPSSTAGPKEVELILVKEQNGVQFTSSTLVSPSGQTHPSGEE
RETWGKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYLFFMVIAGMPLFYMELA
LGQYNREGAAGVWKICPIFKGVGFTVILISLYVGFYYNVIIAWALFYLFSSFTSELPWIN
CNNTWNSPNCSDLNATLLNDTHKATPALEYFERGVLHLHESTGIDDLGLPRWQLTACLAV
VIVVLYFSLWKGVKTSGKVVWITATMPYVVLTVLLLRGVTLPGAIDGIKAYLSVDFLRLY
DAQVWIEAATQICFSLGVGFGVLIAFSSYNKFSNNCYRDAIITSSINSLTSFFSGFVIFS
FLGYMSQKHNVALDKVATDGPGLVFIIYPEAIATLPGSSVWAVIFFIMLLTLGIDSAMGG
MESVITGLIDEFKFLHKHRELFTLFIVVSTFLISLICVTNGGIYVFTLLDHFAAGTSILF
GVLIEAIGIAWFYGVDRFSDDIQEMIGQRPGLYWRLCWKFVSPCFLLFMVVISFATFNPP
KYGTYYFPTWATMVGWCLSISSMIMVPLYAIYKFCSLPGSFCDKLAYAITPETEHHLVER
GEVRQFTLHHWLVV
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgctaagaggcagactcgcagtcacacacatgtcctcgaccatcgcccccgttaaaccc
tccagcaccgcgggccccaaggaggtggagctgatcctggtgaaggagcagaatggggtt
cagtttacctcctccaccctggtcagtcccagtggtcagacacacccgtcaggagaggag
agggagacctggggcaaaaagatcgacttcctcttgtcagtgattggcttcgctgtggat
ctcgccaatgtctggaggttcccctacctgtgctacaaaaatggaggaggtgctttcctg
gtgccgtacctcttcttcatggtgattgctgggatgccactgttctatatggagttagcg
ctcggccagtacaaccgcgaaggagcagcaggagtctggaagatctgtcctatctttaaa
ggtgtgggcttcacagtgatcctgatctccctgtatgtgggattctactataacgtcatt
atcgcctgggctctgttctacctgttctcctcgttcaccagtgaactgccctggatcaac
tgcaacaacacctggaacagtcccaactgctccgatctcaatgctactctgctcaacgat
acgcacaaggccacgccggcgctcgagtactttgagcgaggcgtgctgcaccttcatgag
agtactgggatagatgatctgggtttgccccgctggcaactcaccgcctgcctggccgta
gtcatcgtggtcctctacttcagtctgtggaagggagtcaagacatcaggaaaggtggtg
tggatcacagccacaatgccgtatgtcgtcctcactgtcctgctcctgcgtggagtcaca
ctgcctggagccatcgatggcattaaagcttacctgagtgtggacttcctgcgtttgtat
gatgctcaggtctggatcgaggcagccacacagatctgtttttctctgggagtggggttt
ggtgtgctaatcgccttctccagctacaacaaattcagcaacaactgttatagagacgcc
atcataaccagctccataaactctctgaccagcttcttctctgggtttgtcatattctcc
ttcttgggttacatgtcacagaagcacaacgtcgctctagataaagtcgccacagatggt
cctggtcttgtgtttattatttacccagaagccattgctacactcccaggttcatcagtg
tgggctgtaatcttcttcatcatgctgctcactttaggaatcgacagtgctatgggaggg
atggagtctgtaatcacgggactcatcgacgaattcaaattcctgcacaaacacagagag
ctcttcacactcttcatcgtagtttccacgttcctcatctctctcatctgtgtcacaaac
ggcggcatctatgtgtttaccctgttggaccactttgctgccgggacatcgattctgttt
ggagtgttgattgaggccattggcatcgcctggttttacggagtggatcgcttcagtgat
gatatccaggagatgattggacagagacccggcctctactggagactgtgctggaagttt
gttagcccgtgtttcctcttgttcatggttgttatcagttttgcgacgttcaaccctcca
aagtatggtacatattatttccccacatgggcgacaatggtgggttggtgtctgtccata
tcatctatgatcatggtgcctctctacgccatttacaagttctgttctctgccaggaagc
ttttgtgataaactggcatatgccatcactccagagactgaacatcacttggtggagcgt
ggggaggtccggcagttcacgcttcatcactggctggtggtttga
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