Ctenopharyngodon idella (grass carp): 127498084
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Entry
127498084 CDS
T08802
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cide04054
]
127498084
Pattern recognition receptors [BR:
cide04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127498084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
FISNA
NOD2_WH
PRY
SPRY
LRR_6
LRR_1
LRR_8
LRR_4
Motif
Other DBs
NCBI-GeneID:
127498084
NCBI-ProteinID:
XP_051723008
LinkDB
All DBs
Position
17:complement(20120536..20170785)
Genome browser
AA seq
1056 aa
AA seq
DB search
MSLCEKRDEENDVQTQKAASPEPSCVSMKSDASMRIPPDLSDGAVTSDPETACKRSVCER
KEEEDDVQTRKAAPPEPSCVSMKSDASMRIPPLLSDGAVTSDPEVKRRNVIRSVTPRLTC
TDSDCQTLIKKHDTETLQRVKDQHKISMKNKYESLFEGIKLAENQTLLNRIYTQLYIIEG
ESEGVNEEHEVLQMEKSARTQDTPIYCNDIFKPLHQPGLEKKDKIKTVLTKGIAGIGKTV
SVQKFILDWAEGKANQDVDFMFVLPFRELNLIKDHQYSLHRLLLDFHPELQDLDSTIYEE
CKAVFIFDGLDESRITLMFSDRQKVCGVNESSSVCDVNESSSVGVLMSNLIRGELLPSAL
IWITSRPAAANQIPSKYIHRVTEIQGFSEPQKEEYFRKRISGELQASRIISQIRRSRSLH
IMCHIPVFCWISATVLQNLLKQNDSPEIPQTLTEMYIHFLLTQINMRNQKYDERDPEKLL
KSNRDVILKLAELAFKQLMKGNVMFYEEDLIESGIDITDASVYSGVCTEIFKEESVIHQR
KVYCFIHLSFQEFLAALYLFYCHVVKNEESLKLFMNERYNSYSRENSLYDLLTSAVDKSL
QSKNGHLDLFLRFLLGISLESNQRLLQDLLTHTENSSEPIREITQYTKDQIQGDYECLSA
ERSINLFLCLLEMKDQTLYREIQGFVKSENHSVNRLSPSQCSTIAYMFQISEEVLDEFDL
KKYNTSDEGRRRLIPAVLNCRKAILADCNLTDQCCERLSSCLQSSNSLRELDLSNNNLQD
SGVKLLADGLKNLHCQLNILRLSGCMVTEEGCCYLASALRSNPSHLRELDLSYNHPGQSL
VKLLSDPNYRLDKLNVDHGREIRITAGPQKYACDLTVDLNSVKTSLVLPERNRKVKCVRE
NQPYPDHPERSDICYQILCRESLTGRCYWEAEWSGWVSISVTYKGISRKRLSNGNVFGSN
EKSWCLFCSKNSFTVKHNNKSTEISAPSRRSKRVGVFLNWSVGTLSFYSVSDTHKLTHLH
TFNSTFTEPLYAGFGFFYSDASVSLCEIKHLPVRNN
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgagtctctgtgagaagagagatgaggagaatgatgttcagacacagaaagcagcatct
ccagaacccagctgtgtgtctatgaaaagcgacgcatccatgagaatccctcctgatctc
agtgatggagcagtgacctctgaccctgaaactgcctgcaaaaggagtgtctgtgagagg
aaagaggaagaggatgatgttcagacacgtaaagcagcacctccagaacccagctgtgtg
tctatgaagagtgacgcatccatgagaatccctcctcttctcagtgatggagcagtgacc
tctgaccctgaagtgaaaagacgcaacgtaatcagatcagtgacgccccgtctgacctgc
actgactctgactgtcaaaccctcatcaagaagcatgacacagaaaccctgcagagagtc
aaagaccaacacaaaattagcatgaagaacaagtacgagagcttatttgagggaatcaaa
ctagcagagaatcaaaccctcctgaacaggatctacacacagctctacatcatagaggga
gagagtgaaggggtgaatgaagaacatgaggttttacagatggagaaatcagccagaaca
caagacactccaatctactgcaatgacatctttaaacctttacatcaaccaggacttgag
aagaaagacaaaatcaagactgttcttactaaaggcatcgctggaataggaaaaaccgtc
tctgtgcagaagttcattctggactgggccgagggaaaagccaatcaggatgtggatttc
atgtttgtgcttccatttcgagagctgaacttgattaaagatcaccagtacagtcttcac
agacttctgctggactttcatcctgaacttcaagatctggactcaacgatttatgaggag
tgtaaagctgtgttcatctttgatggtctagatgagagcagaatcacactgatgttttca
gacagacagaaagtttgtggtgtgaatgagtcttcatcagtttgtgatgtgaatgagtct
tcatcagtgggtgtgttgatgtcaaacctcatcagaggagagctgcttccctctgctctc
atctggatcacctccagaccagcagcagccaatcagatcccctcaaaatacatccaccgt
gtgacagaaattcagggattcagtgagcctcagaaggaggaatatttcaggaagagaatc
agtggcgagcttcaagccagcagaatcatctcgcaaattagaagatcaagaagcctccac
atcatgtgtcacatacccgtcttctgctggatctcagccactgtgcttcaaaacctcctg
aaacaaaatgacagtccagaaatccctcaaactctgactgaaatgtacatccacttcctg
ctgactcagatcaacatgaggaatcagaagtatgatgagagagatccagagaaactcctg
aaatccaacagagacgtgattctgaaacttgctgaactggctttcaaacagctgatgaag
ggcaatgtgatgttctatgaggaggacctgattgagagcggcatagacatcactgacgcc
tcagtgtattctggggtttgcactgagatctttaaggaggaatctgtgattcatcagagg
aaagtctactgcttcattcatctgagctttcaggagtttctagctgctttatatctgttt
tactgccatgtagtcaagaatgaggaatcactgaagttgtttatgaatgaaagatataac
agttacagtcgggaaaactctctgtatgatctactaacatcagcagttgataaatcctta
cagagtaaaaatggacacctggatcttttcctgcggttcctgctgggcatctcactggag
tccaatcagagactcttacaggatttactgacacacacagagaacagctcagaacccatc
agagaaatcacacagtacactaaagaccaaatccagggtgattatgaatgtctctcagct
gagagaagcatcaatctgttcctctgtctgctggaaatgaaggatcagactctgtacaga
gagattcaggggtttgtgaaatcagagaatcactcagtgaatcgactctctccgtctcaa
tgctcaacaatcgcctacatgtttcagatatcagaggaggtgctggatgagtttgatctg
aagaaatacaacacatcagatgagggtagaaggagactgataccagctgtgctgaactgc
agaaaagctatactcgctgactgtaatctcactgatcagtgctgtgaaaggttgtcttca
tgtctacaatcatcaaactctctgagagagctggacctgagtaacaataacctgcaggat
tcaggagtgaagcttctcgctgatggactgaagaatttacactgtcaactcaacatactg
agattatctggctgtatggtgacagaggaaggctgttgttatctggcttcagctctgaga
tcaaacccctcacacctgagagagctggatctgagctacaatcacccaggacaatcatta
gtcaagcttctttctgatccaaactacagactggacaaactcaatgtggatcatggaaga
gagatcagaattacagcagggccacagaaatatgcatgtgatctcacagtggatttaaac
tcagtaaagactagtcttgttctgcctgagaggaacagaaaggtgaagtgtgtgagagag
aatcagccgtatcctgatcatccagagagatctgatatctgttatcagattctgtgtaga
gagagtctgactggacgctgttactgggaggctgaatggagcgggtgggttagtatatca
gtgacgtataaaggaatcagcaggaaaagattgagcaatggcaatgtgtttggatccaat
gaaaagtcctggtgtctgttctgttctaaaaacagtttcactgtcaagcacaataataag
agcacagaaatatctgctccttcacgtcgctctaagagagtaggagtgtttctgaactgg
tcggtcggcactctgtccttctacagcgtctctgacacacacaaactcacacacttacac
acatttaacagcacattcactgaacccctctatgctggatttggttttttttattctgat
gcttcagtgtctttgtgtgagattaaacatcttcctgtgagaaacaactga
DBGET
integrated database retrieval system
