Ctenopharyngodon idella (grass carp): 127498085
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Entry
127498085 CDS
T08802
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cide04054
]
127498085
Pattern recognition receptors [BR:
cide04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127498085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
FISNA
PRY
NOD2_WH
SPRY
LRR_6
LRR_4
RNA_pol_Rpb2_2
LRR_8
Motif
Other DBs
NCBI-GeneID:
127498085
NCBI-ProteinID:
XP_051723011
LinkDB
All DBs
Position
17:complement(20141553..20170502)
Genome browser
AA seq
1047 aa
AA seq
DB search
MSLYEKREEEDDVKSASPEPSCVSMKSDASIGDPPDLSDGAVTSDPDTACKMSLYEKREE
EDVKAASPNPSCVSMKSDASIGDPPDLSDGAVTSDPEVKRIRSMMACLTCTDSDCQTLIK
KHDTEALQRVKDQHKTSMKNKYESLFEGIKLEENQTLLNRIYTQLYIIEGESEGVNEEHE
VLQMEKSARTQDTPIYCNDIFKHLHQPECEEKDKIKTVLTKGIAGIGKTVSVQKFILDWT
EGKANQDVDFMFVLPFRELNLIKDHQHSLHRLLLVFHPELQDLDSKIYEECKVVFIFDGL
DESRMTLMFSDDEKVCEVNESSSVVCDVNESSSVGVLMSNLIRGELLPSALIWITSRPAA
ANQIPSKYINRVTEIQGFNEPQKEEYFRKRISDEHQASRIISHIRRSRSLHIMCHIPVFC
WISATVLQNLLKQGDSPEIPQTLTEMYIHFLLTQTNMKNQKYEERDPEKLLKSNRDVILK
LAELAFKQLMKGNVMFYEEDLTESGIDVTDASVYSGICTEIFKQESVIHQRKVYSFIHLS
FQEFLAALYLFYCHVFKSMNSLKTLKSFLGMWSRFTEIPLYDLLKSAVDKYLQSEKGHLD
LFLRFLLGVSLESNQSLLQDLLTHTENSSESIKRITQYIQDKIRGDERLSVDRSINLFLC
LLEMKDQTLYREIQEFVKSKNHSENRLSPSHCSTIAYMLQISEEPLDEFDLKKYNTSDEG
RRRLIPAVVYCRKALLADCNLNDQCCESLSSCLQSSNSLRELDLSHNDLQDSGVKLLADG
LKNLHCQLNILRLSDCMVTEEGCCYLASALRSNPSHLRELDLSYNHPGQSLVKLLSDPNY
RLDKLNVDHGGEIRITTGIQKYACNLTLDLNTAHICLALSERNRKMTCVIKKQPYPDHPE
RFDKFLQVLCRESLTGRCYLETEWSGKWVYISVTYKGISRKGGSDDCRFGHNKKSWSLSW
YKNSFTVRHNNKITEISAPSRRSNRVGVYLNWSAGTLSFYSVSDTHTLTHLHTFNSTFTE
PLYAGFGVSFGSSVSLCEIKHLPVRNN
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgagtctctacgagaagagagaggaggaggatgatgttaaatcagcatctccagaaccc
agctgtgtgtctatgaagagtgacgcatccattggagaccctcctgatctcagtgatgga
gcagtgacctctgaccctgacactgcctgtaaaatgagtctctatgagaagagagaggag
gaggatgttaaagcagcatctccaaatcccagctgtgtgtctatgaagagtgacgcatcc
attggagaccctcctgatctcagtgatggagcagtgacctctgaccctgaagtgaaaagg
atcagatcaatgatggcctgtctgacctgcactgactctgactgtcaaaccctcatcaag
aagcatgacacagaagccctgcagagagtcaaagaccaacacaaaactagcatgaagaac
aagtatgagagcttatttgagggaatcaaactagaagagaatcaaaccctcctgaacagg
atctacacacagctctacatcatagagggagagagtgaaggggtgaatgaagaacatgag
gttttacagatggagaaatcagccagaacacaagacactccaatctactgcaatgacatc
tttaaacacttacatcaaccagaatgtgaggagaaagacaaaatcaagactgttcttact
aaaggcatcgctggaattggaaaaaccgtctctgtgcagaagttcattctggattggacc
gagggaaaagccaatcaggatgtagatttcatgtttgtgcttccatttcgagagctgaac
ttgattaaagatcaccagcacagtcttcacagacttctgctggtctttcaccctgaactt
caagatctggactcaaagatttatgaggagtgtaaagttgtgttcatctttgatggtctg
gatgaaagcagaatgacactgatgttttcagatgatgagaaagtttgtgaggtgaatgag
tcttcatcagttgtttgtgatgtgaatgagtcttcatcagtgggtgtgttgatgtcaaac
ctcatcagaggagagctgcttccctctgctctaatctggatcacctccagaccagcagca
gccaatcagatcccctcaaaatacatcaaccgtgtgacagaaattcaaggattcaatgag
cctcagaaggaggaatatttcaggaagagaatcagtgacgagcatcaagccagcagaatc
atctcacacatcagaagatcaagaagcctccacatcatgtgccacatacctgtcttctgc
tggatctcagccactgtgcttcaaaacctcctgaaacaaggtgacagtccagaaatccct
caaactctgactgaaatgtacatccacttcctgctgactcagaccaacatgaagaatcag
aagtatgaagagagagatccagagaaactcctgaagtccaacagagacgtgattttgaaa
ctggctgaactggctttcaaacagctgatgaagggcaatgtgatgttctatgaggaggac
ctgactgagagcggcatagacgtcactgatgcctcagtgtattctgggatttgcactgag
atctttaagcaggaatctgtgattcatcagaggaaagtctacagcttcattcatctgagc
tttcaggagtttctagctgctttatatctgttttactgtcatgtatttaagagcatgaat
tcattgaaaacactgaagtcctttctgggtatgtggtccaggttcactgaaatccctctc
tatgatctactaaaatcagcagttgataaatacttacagagtgaaaaaggacacctggat
cttttcctgcggttcctgctgggcgtctcactggagtccaatcagagtctcttacaggat
ctactgacacacacagagaacagctcagagagtatcaagagaatcacacagtacattcaa
gacaaaatcaggggtgatgaacgcctctcagttgacagaagcatcaatctgttcctctgt
ctgctggaaatgaaggatcagactctgtacagagagattcaggagtttgtgaaatcaaag
aatcactcagagaatcgactctctccgtctcactgctcaacaatagcctacatgcttcag
atatcagaggagccgctggatgagtttgatctgaagaaatacaacacatcagatgagggt
agaaggagactgataccagctgtggtgtactgcagaaaagctctacttgctgactgtaat
ctcaatgatcagtgctgtgaaagtttgtcttcatgtctacaatcatcaaactctctgaga
gagctggacctgagtcacaatgacctgcaggattcaggagtgaagcttctcgctgatgga
ctgaagaatttacactgtcaactcaacatactgagattatctgactgtatggtgacagag
gaaggctgttgttatctggcttcagctctgagatcaaacccctcacacctgagagagctg
gatctgagctacaatcacccaggacaatcattagtcaagctgctctctgatccaaactac
agactggacaaactcaatgtggatcatggaggagagatcagaattacaacaggaatacag
aaatatgcgtgtaatctcacactggatttaaacacagcacacatttgtcttgctctgtct
gagaggaacagaaagatgacgtgtgtgataaagaagcaaccctatcctgatcatccagag
agatttgataagtttcttcaggttctgtgtagagaaagtctgactggacgctgttacttg
gagactgaatggagcgggaagtgggtttatatatcagtgacatataaaggaatcagcagg
aaaggagggagtgatgactgtaggtttggacacaataaaaagtcctggagtctgagctgg
tataaaaacagtttcactgtcagacacaataataagatcacagaaatatctgctccttca
cgtcgctctaacagagtaggagtgtatctgaactggtcggccggcactctgtccttctac
agcgtctctgacacacacacactcacacacttacacacattcaacagcacattcactgaa
cccctctatgctggatttggggtttcttttggtagttcagtgtctctgtgtgagattaaa
catcttcctgtgagaaacaactga
DBGET
integrated database retrieval system
