Ctenopharyngodon idella (grass carp): 127498087
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Entry
127498087 CDS
T08802
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cide04054
]
127498087
Pattern recognition receptors [BR:
cide04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127498087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
PRY
NOD2_WH
SPRY
LRR_6
AKAP95
Motif
Other DBs
NCBI-GeneID:
127498087
NCBI-ProteinID:
XP_051723016
LinkDB
All DBs
Position
17:20777970..20786582
Genome browser
AA seq
990 aa
AA seq
DB search
MSVNEKREEEDAVQTNLAASSIPCLVSMKSTKSISCPTNIGVEVATSDLDKQHVKEASLQ
THTLLNKTKDPQRDFHQPVNDVLQRVKDRHKTSMKNKYESLFEGINLEETQPLLNRIYTQ
LYIIEGESEGVNEEHEVLQMEKTARTQDTPIYCNDIFKPLHQPGCEEKDKIKTVLTKGIA
GIGKTVSVQKFILDWTEGKANQDVDFMCVLPFRELNLIKDHQYSLHRLLLDFHSELQDLD
LKIYEECKVVFIFDGLDESRITLMFSDDEKVCDVNESSSVGVLMSNLIRGELLPSALIWI
TSRPAAANQIPSKYINRVTEIQGFNEPQKEEYFRKRISDENKASRIISHIRRSRSLHIIC
HIPVFCWISATVLQNLLKQDDSAEIPETLTEMYIHFLLTQINMRNQKYDERKAKKLLKTN
RKVIIKLAELAFKQLMKGNVMFYEEDLIESGIDVTDASVYSGICTEIFKQESVIQQRKVY
CFIHLSFQEFLAAFFLFYSHVVKIQKSLKSFLNMLFGSKEISLYDLLKAAVDKSLESKNG
HLDLFLRFLLGVSMESNQRRLQDLLTHTENSSKTIKKITQYIKDKIKDDEHLSADRTINL
FLCLLEIKDQTLYREIQTFVKSENHSVNRLSPSHCSTIADLLQISEEPLDEFDLKKYNTS
DEGRRRLIPAVVNCRKALLADCNLTDQCCESLSSSLQSSNSLRELDLSNNALLVSGVKSL
SNGLKSSHCHLNILRLSGCMVTEEGCCYLASALNSNPSHLRELDLSYNHPGQSLVKLLSD
PNYRLDKLNVDHGGEIRITTGPQKYACDLTLDPNTANTRLALSEKNRKVTHVEEKQPYPD
HPERFDECLQVLCRESLTGRCYWETEWSGSEVYISVTYKGIKRKGGSDDCWFGYNEKSWS
LDWFNNSFTVSHNNKSTEISAPSNLSNRVGVFLNSWAGTLSFYSVSDTHTLTHLHTFNST
FTEPLYAGFMVDYGSSVSLCEIKHLPVRNN
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcaatgagaagagagaggaggaggatgctgttcagacaaacttagcagcatct
tcaataccctgtcttgtgtctatgaagagtactaagtccattagctgtcccactaatatt
ggtgttgaagtagcgacctctgacctggacaagcagcatgtgaaagaagcatccctgcag
acacacacactgcttaacaagactaaagacccgcagcgcgattttcaccaaccagtgaat
gatgtccttcagagagtcaaagaccgacacaaaaccagcatgaagaacaagtatgagagc
ttatttgagggaatcaatctagaagagactcaacccctcctgaacaggatctacacacag
ctctacatcatagagggagagagtgaaggggtgaatgaagaacatgaagttttacagatg
gagaaaacagccagaacacaagacactccaatctactgcaatgacatctttaaaccctta
catcaaccaggatgtgaggagaaagacaaaatcaagactgttcttactaaaggcatcgct
ggaattggaaaaaccgtctctgtgcagaagttcattctggactggaccgagggaaaagcc
aatcaggatgtagattttatgtgtgtgcttccatttcgagagctgaacttgattaaagat
caccagtacagtcttcacagacttctgctggactttcattctgaacttcaagatttggac
ttaaagatttatgaggaatgtaaagttgtgttcatctttgatggtctggatgaaagcaga
attacactgatgttttcagatgatgagaaagtttgtgatgtgaatgagtcttcatcagtg
ggtgtgttgatgtcaaaccttatcagaggagagctgcttccctctgctctcatctggatc
acctccagaccagcagcagccaatcagatcccctcaaaatacatcaaccgtgtgacagaa
attcagggattcaatgagcctcagaaggaggaatatttcaggaagagaatcagtgatgag
aataaagccagcagaatcatctcacacattagaagatcaagaagcctccacatcatttgt
cacatacctgtcttctgctggatttcagccactgtgcttcaaaacctcctgaaacaagat
gacagtgcagaaatccctgaaacacttactgaaatgtacatccacttcctgctgactcag
atcaacatgaggaatcagaagtatgatgagagaaaagcaaagaaactcctgaagaccaac
agaaaagtaattataaaacttgcagaactggctttcaaacagctaatgaagggcaatgtg
atgttctatgaggaggacctgattgagagcggcatagacgtcactgacgcctcagtgtac
tctgggatttgcactgagatctttaagcaggaatctgtgattcagcagaggaaagtttac
tgcttcatacatctgagctttcaggagtttctagctgctttctttttgttttactcccat
gtagtcaagattcagaaatcactgaagtcatttctaaatatgttgtttgggtcaaaggaa
atctctctgtatgatctactaaaagcagcagttgataaatccttagagagtaaaaatgga
caccttgatcttttcctgcggttcctgctgggcgtctcaatggagtccaatcagagacgc
ttacaggatctactgacacacacagagaacagctcaaagaccatcaagaaaatcacacag
tacataaaagacaaaatcaaggatgatgaacatctctcagctgacagaaccatcaatctg
ttcctctgtctgctggaaattaaggatcaaactctgtacagagagattcagacgtttgtg
aaatcagagaatcactcagtgaatcgactctctccgtctcactgctcaacaatcgccgac
ttgctgcagatttcagaggagccgctggatgagtttgatctgaagaaatacaacacatcc
gatgaaggtagaaggagactgataccagctgtagtgaactgcagaaaagctctactcgct
gactgtaatctcactgatcagtgctgtgaaagtttgtcttcatctctacaatcctcaaac
tcactgagagagctggacctgagtaacaatgccctgctggtttcaggagtgaagtctctc
tctaatggactgaagagttcacactgccatcttaacatactgagattatctggctgtatg
gtgacagaggaaggctgttgttatctggcttcagctctgaattcaaacccttcacatctg
agagagctggatctgagctacaatcacccaggacaatcattagtcaagctgctctctgat
ccaaactacagactggacaaactcaatgtggatcatggaggagagatcaggattacaaca
ggaccacagaaatatgcatgtgatctcacactggatccaaacacagcaaacactcgcctt
gctctgtctgagaagaacagaaaagttacacatgtggaggagaagcagccgtatcctgat
catccagagagatttgatgagtgtcttcaggttctgtgtagagagagtctgactggacgc
tgttactgggagactgaatggagtgggagtgaggtttatatatcagtgacatacaaagga
atcaaaaggaaaggagggagtgatgactgttggtttggatacaatgagaagtcctggagt
ttggactggtttaataacagtttcactgtctctcacaataataagagcacagaaatatct
gctccttctaatctctctaacagagtaggagtgtttctgaactcatgggccggcactctg
tccttctacagcgtctctgacacacacacactcacacatttacacacattcaacagcaca
ttcactgaacctctctatgctggatttatggttgattatggtagttcagtgtctctgtgt
gagattaaacatcttcctgtgagaaacaactga
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