Ctenopharyngodon idella (grass carp): 127498176
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Entry
127498176 CDS
T08802
Name
(RefSeq) protein quaking-A isoform X1
KO
K14945
protein quaking
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127498176
Spliceosome [BR:
cide03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
127498176
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GFIT
Motif
Pfam:
STAR_dimer
Quaking_NLS
KH-I_KHDC4-BBP
KH_1
KH_12
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
127498176
NCBI-ProteinID:
XP_051723196
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Position
17:complement(11751866..11827357)
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AA seq
383 aa
AA seq
DB search
MMVGEMEVKERPRPSPDYLMQLLNEKKLMTSLPNLCGIFTHLERLLDEEITRVRKDMYND
TVNGLVDKHPLELPEAVGPIVHLQEKLFVPVKEYPDYNFVGRILGPRGLTAKQLEAETGC
KIMVRGRSSMRDRKKEEQNRGKPNWEHLNEDLHVLITVEDTQTRAEIKMRRAVEEVKKLL
VPAAEGEDNLKKMQLMELAILNGTYRDTNIKTPTLAFSLAAAAAAAQGPRLIAAPAGQVL
PPAALRPPTPAGTPIMNIIRPTQMATVLPNGTPTLVPPTPDGGIIYTTPYDYPYALAPTS
LLEYPIEHSGVLGKRAWGLGTSPFGAPQEGFAGVFYGGMFDGASPGPVQDSMKGAMATKV
RRHDSRVHPYQRIVTTDRAATGN
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgatggtcggggagatggaggtgaaggagagaccgaggccgagtcccgactatctcatg
cagttattaaacgagaagaagctcatgacgagtttaccaaacctgtgcggcatcttcaca
cacctggagagactcttggacgaagagataaccagagtgaggaaagacatgtataacgac
acagtgaacggtctggtggacaagcacccgctggagttacccgaggcagtgggacccatc
gtacatctgcaggagaaactctttgtaccggtcaaagagtacccggattataattttgtc
gggagaatacttggccctcgtggactcacagcaaagcaactggaggcagagactggctgc
aagatcatggtgagagggaggagctccatgagagacagaaagaaggaggagcagaacaga
gggaagccaaactgggagcacctaaatgaagacctgcatgtgctgatcacagtggaggac
acacagacacgtgccgagatcaagatgagaagagctgttgaagaggtcaagaagctactg
gtgcctgcagctgaaggagaagataatctaaagaagatgcagctgatggagctggccatt
ctgaacggaacatacagagacaccaacatcaaaacgcccacccttgcgttctctcttgca
gcagcggcagcggctgctcaaggcccgcgtttgatcgcagcccctgcgggtcaggtcctc
cccccggctgccctcaggccccccactccggcagggacccccatcatgaacatcattcgg
cccactcagatggccactgtgctacccaacggcacccctaccttggtgcccccgacacct
gacgggggcattatctacaccacgccctacgattacccttatgccttggcacccacgtct
ctgctggaatatcccatcgagcacagcggagtcctaggtaagcgggcgtgggggcttggc
acttcaccctttggtgccccgcaagagggctttgctggggtgttttacgggggaatgttc
gatggggcgtcacccggccccgttcaggactcaatgaaaggtgcaatggctactaaagtg
cggagacatgattcacgggtccatccttaccaaaggatagtgaccacagacagagccgcc
accggcaactaa
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