Ctenopharyngodon idella (grass carp): 127498261
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Entry
127498261 CDS
T08802
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127498261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cide03021
]
127498261
Transcription machinery [BR:
cide03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
127498261
Prokaryotic type
Archaeal type
TFB
127498261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
KIF9
RB_B
Sigma70_r4
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
127498261
NCBI-ProteinID:
XP_051723378
LinkDB
All DBs
Position
2:complement(15614674..15620520)
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AA seq
316 aa
AA seq
DB search
MASTSRGDSLPKVQCPNHPDAQLVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFTNEKA
TKDPSRVGDAQNPLLNGGDLTTMISKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAFKE
ISTMADRINLPRNIIDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATYIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAADLF
PPDFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgagccgtggagattctcttcccaaggtgcaatgccccaatcaccccgat
gcacagctggtggaggactacagggcaggagacatgatctgtcctgaatgtggccttgta
gtaggtgaccgtgtaattgatgtagggtcagagtggagaacgttcaccaatgagaaagca
actaaagacccgtctcgtgttggtgatgctcagaaccctctcctcaatggaggagacctc
accaccatgatcagcaaaggaacaggtgcagcaagctttgatgagtttggaaattccaag
taccagaatcggagaaccatgagcagctctgatcgagccatgctgaatgccttcaaagag
atcagcaccatggccgacaggatcaaccttcccagaaacatcattgaccgaacaaacaac
ttgttcaaacaggtttacgaacagaagagtctgaaaggcagaagtaatgatgcgattgct
tcggcctgcctttacatagcgtgcagacaggagggcgtccctagaacatttaaagaaatc
tgtgccgtgtctcggatctcaaagaaggagatcggccgttgcttcaagcttatcctgaag
gctcttgagacgagtgtggacctcattacaaccggcgacttcatgtcacgtttctgctcc
aacttgggcttgcccaaacaggtgcaaatggcggctacttacatcgccaggaaggccgtg
gaactggacttggttccagggcgcagtccaatctcagtggcagccgcagccatttacatg
gcctctcaagcatctgctgagaagaagacacagaaagagattggggacattgctggagtg
gcagacgtcaccatccgtcagtcctaccgtctcatttacccccgcgctgccgatctcttt
cctcccgacttcaaattcgacacacctgtggataaactgcctcaactgtga
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