Ctenopharyngodon idella (grass carp): 127498328
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Entry
127498328 CDS
T08802
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127498328
Membrane trafficking [BR:
cide04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
127498328
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
127498328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Lgl_C
EIF3I
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Synaptobrevin
WD40_like
CFAP43_N
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
127498328
NCBI-ProteinID:
XP_051723545
LinkDB
All DBs
Position
17:complement(1961572..2022164)
Genome browser
AA seq
1174 aa
AA seq
DB search
MKKFNIRKVLDGLTAASSSSSAAAASPQSGNRENDMIQETLQSEHFQLCKTLRHGFPYQP
SSMAFDPVQKILAIGTQSGALRLFGRAGVECYCQHESGSAVIQLEFLVNEGALVSALADD
SIHLWNLRQKLPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNIHIVNVESFTLSGYV
IMWNKAIELSSKTHPGPVVHISDNPMDEGKLLIGFECGIVVLWDLKSKKADYRYNYDEAI
HSVAWHHEGKQFVCSHSDGTLTTWNVRAPAKPAQIITPHGKQPKDGKKPEPCKPILKVEY
KTTRAGDPFMILCGGLSYDTVGRRACLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQ
DPYAVVVLLEKDLVVIDLAQIGYPIFENPYPLSIHESPVTCCEYFADCPAEVIPALYSVG
SRQKRQGFSKKEWPVSGGNWGQGTLSFSEIIITGHADGSIKFWDASALMLQVLYKLKTAK
VFEKPRGKEEKSSTEIVDEDPFAIQILSWCPESRVLCVAGVSAHVIVYRFSKQEVTTEVV
QLLEVRMQCELNEVESPEGGGEQASAVSTPGTSSSPQTSLPQSHPSTSSNNSSDGLRDNV
PCLKVRSSPLKQSPGYQVELLIQLVWVSGEPPQQITSLAVNSAYGLVAFGNGNGLAVVDY
LQKTLLLNMSIAELNGSTDPHHRQPRSPRKARQPSAGLCDGNDASATPEERCKSPTSGSG
SPCNSDEDSKQKFIDKGTVHYTHPFSVLEKPLFSLIWFFSTHFPVMSKSKQISKTVANDF
AKISRKINMIADQKDDARDNSFSRSRSSSVTSLERESREVISSLYFCDSLSKKSETVAVP
SLWVGTSLGSMLTIALTVPSTPEQRMQQPVGVCFCGSVVRLKGGILRMAQLDASGTLLPH
IYEPWYEPNAPEEEKERPRRRQPTSPPSSQENQDCQYAVVCSEKQAKVVALPSQNCIYEH
NITEASFVLRADVVMMTAGVGLACFCANGHIMTLSLPSLRPLLDVNYLPLTDMRIARTFC
FSNQGQALYLTSPTEIQRITYSQETCDNLQEMLGELFTPVETPEAPNRGFFKGLFGGGAQ
SLDREDLFGEVAAGKASRSLAQHIPGPGGMEGMKGAASGVVGELARARIALDERGQKLGE
LEERTAAMMASADSFSRHAHDIMLKYKDKKWYQL
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaatatcaggaaggtgttggacggcttgactgcggcgtcctcttcctcc
tccgccgctgccgcgtcccctcagtcgggaaacagggagaatgacatgattcaggagacc
ctgcagtcagagcatttccagctctgcaagacactgcgacatggctttccctatcaaccc
tcttccatggcttttgaccctgtacagaaaattctggctattggcacacagagcggagcc
ctaagactattcggcagagcaggggtggagtgttactgccagcatgagagcggatcggct
gtcatccagctggagtttcttgtcaatgaaggggcactggttagcgctttggcagatgac
agtattcatttgtggaatctgaggcaaaaacttccagccattctccattctcttaaattt
aatcgggagaggatcacgttttgccatttgccgtttcagagtaaatggctctacgtgggc
acggaaagagggaacattcacattgtcaatgtggagtccttcaccctctcaggctatgtc
atcatgtggaacaaagccattgaactttcctcaaagactcaccctggacctgtagttcat
atcagcgataaccccatggacgaagggaaacttttaattggttttgagtgtggcatagtt
gtgctgtgggacttgaaatcgaagaaggctgactaccgttacaactatgacgaggcgatc
cactctgtggcttggcatcacgaggggaaacagtttgtgtgcagtcactcagatggcaca
cttaccacatggaatgtacgcgctccagccaagcctgcccagatcattacaccgcatggt
aaacagcccaaggatggaaagaagccggagccatgcaaacccatcttgaaagtggagtac
aaaactaccagggcaggggacccattcatgatactgtgtggaggtttgtcatatgataca
gtgggtaggcgagcctgtctgactgtgatgcatgggaaaagcactgcggtgctggagatg
gactaccccatagtggatttccttacgctgtgtgaaaccccatatccaaacgatttccag
gatccttatgctgttgttgtcctgctggagaaggatttggttgttattgaccttgcacaa
attgggtatccgatctttgagaatccatatcctttgtccatccacgagtctccggtgacc
tgctgcgaatattttgcggactgtcctgctgaagtcattcctgcgctttactctgtgggc
tccagacaaaaaagacagggcttcagtaagaaggaatggccagtaagtggaggtaactgg
ggccagggaacactaagtttttcagagatcatcatcactgggcatgctgatggatcgatc
aagttttgggatgcctcagcattgatgctgcaggttttgtataagctgaaaacagcaaag
gtcttcgagaagccccgtggtaaagaggagaaatccagcactgaaattgtggatgaagat
ccttttgctatccagatcctgtcttggtgtccagagagtcgtgtgctctgtgtggctgga
gtatcggctcatgtcatagtctacaggttcagcaaacaggaagtcaccactgaagtggtc
cagctgctggaggtgcgtatgcagtgtgaactgaatgaagtggaatctccggagggcgga
ggtgagcaggcatcggccgtttccaccccaggaacctcatccagccctcaaaccagcttg
cctcagtctcacccctccaccagcagcaacaactcctctgacggcctgcgagataacgtg
ccctgtctcaaggtcaggagttctcctctcaaacagtctccgggttaccaggtggagctg
ctcattcagctggtgtgggtcagcggggagccgccacaacagatcaccagcctggccgtc
aactctgcatatggcctagttgcttttggcaatggtaacggacttgcagtggttgattat
cttcagaaaactctccttctgaacatgagcatagccgagttgaacggctcaacagatcct
caccacagacaaccacgctcaccccgcaaagccagacagccttcggcaggtctttgtgat
ggtaatgatgcatcagccactccagaggagagatgtaaatcaccaacatcaggctccggt
tcaccatgcaattctgatgaagacagcaaacaaaagttcattgacaagggtacagtacat
tatacacacccattttctgtcttagaaaagcctttattttcattgatttggttcttttca
acacattttccagtgatgtccaaaagcaagcagatatccaagactgttgccaatgacttt
gctaagatatcccggaaaattaacatgattgctgatcagaaagatgatgccagggacaac
tcgttcagccgctcacgcagctccagtgtgaccagccttgaaagagagtcacgtgaggtc
atttcctccttatacttttgtgactccctgtccaagaagagtgagacggtggcagtgccc
agcctgtgggtgggcacctcattgggcagcatgctgaccatcgccctcactgtgccctcc
acaccagaacagaggatgcaacagcctgtgggtgtctgtttctgtggttcagtggtgcgc
ttgaaaggaggcattctgcgcatggcccagctggatgccagcgggacgcttctgccccac
atttatgagccctggtatgagcccaacgcccctgaggaggagaaagaacggccacggaga
cgccagcccacatcccctccttcttctcaggagaaccaggactgtcagtacgctgtggtc
tgctcagagaagcaggctaaggtggtggcactgccctcccaaaactgcatctacgagcac
aacatcaccgaggcctccttcgtacttagagctgatgtggtgatgatgaccgcaggggtc
ggcctcgcctgtttctgtgccaatggccacattatgaccctcagtttgcccagcctgcgg
ccactgctggatgtgaactaccttcctctgacagacatgaggatagccagaaccttctgt
ttctcaaaccaaggccaggccctgtacctcacatcgcccactgagatccaaagaatcacc
tatagccaggaaacctgtgataacctgcaggagatgcttggagagctgtttactccagtg
gagacaccagaggctccgaacagagggttcttcaagggcttatttggaggcggtgctcag
tccttggacagagaggacctgtttggagaggtggctgctggtaaggcctctcgcagcctg
gcgcagcacatcccaggtccaggtggtatggagggcatgaagggggccgcgtcaggtgtg
gtgggagagttggcacgggcgaggatagctctggatgagagaggacagaaactaggcgag
ctggaggagaggacagcagccatgatggccagcgcagactccttctccagacacgcacat
gatataatgctgaaatacaaggacaagaaatggtaccagctctga
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integrated database retrieval system
