Ctenopharyngodon idella (grass carp): 127498337
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Entry
127498337 CDS
T08802
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127498337
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
127498337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
zf-UDP
Motif
Other DBs
NCBI-GeneID:
127498337
NCBI-ProteinID:
XP_051723559
LinkDB
All DBs
Position
17:complement(14485963..14549649)
Genome browser
AA seq
2625 aa
AA seq
DB search
MAVELVGKRCLCVSGGESLELAGISRWTWRAGVIRAITDSPALTVCVHWDGEQSAERKWR
RLREECEVVLLEQELVWAAKRTGTSGSSSAQEKRRLQPALRFRPLIGQSCVEGLSVVEFI
SDRQLEFYTEKEDLQPFEDEVGDGNPAVRDDPSLQEQVQAWLKQNQFQNILQQGACSLKG
LRVKVFRQESKTQWLPGVITHHDQNNRTVAVMTDQVRETVNVDPSLVHVVLLDDITHSLL
MGDNSKHKSYITKINRIFLGTESISNNTTTNEQVCISRPVQQQSVLSAQNCGMEDDEKEG
MRDGKRSDEGRDSSKSKNSNGDRKRKKEDEEKDDKQRTRCGLKRLKASSVVSDLSENTDS
ENSSCRMQDSSSDSGSKRQLKQHYTSKRSLDCEVHLSHKGGEPSPGQLGECETQKLGKTP
PSDFPSASCNGTFRKTEAQECAAGVSGGKSDEKGDGGTTEIEDRTEGASREDSEAVSALL
ASQESEQLVSMETTCVLLHASPLECEGAEGEHEMSTNDPEVRGSEFTHAEARGSEFNQSE
VKRSEFLHSVAITTSNDTAVTVEEEPRSASPHSPVKPCSKKEDVDSKQRCSPAAVNAEYG
PVISLEATHKPSVHASPCSSPEIILKPQNVQEMSRQKQSASLEMLKEDTPLPKSMDRTLS
SLKMAPNLKMTCSATPVLTRTPSPSPNRSRTPTHSPPCTPNRTPTPDKSTKSPLIVDRKE
PFTIYRDPALVRAELEAHPTYIQPPHTPPNPKHHLKAPSPSSSSPSLTPTSSHSKLLSPS
PHPAHLSPIPLHSQPPLCSLSTPHSTIPHPHLLPSLLPALPPSGALLAGHPRIGAMGLPH
HPLALSGNPSLLGQTSGAAPLAPLGLYPLLWPPFPNGAHSYPGLGLQASKWTHPDGAGIS
DSNVRRNPPSPWISQPTPVTNADGQGMQPPLPIRPSSADPQRASRSTQHCVPSSKTTEEL
DRRAVAESTLIHTHLKSEQERVRAALGKNGQSYSPVPPESPPSRTKQPLVVYDLTGERPN
RYQEENRRILLESSEVAPFTAKLGSDREPRYPRSPTSALPSKEREREMDRERKRDVHAFR
HTLPPRPHSAHPTPTLTPSSYYTSLSNSIENKPPQRRVPASKELYERLSASNTVTPVLTS
SSSQVSIRARPPPLIKRHHEKEEGLLGKITEQLAHKASSMEAVEVATVERRGPGSSLISV
SSCPRNVPLLHRAPIFHPPAPTILVSKDSGHGRLSPPTLTPIQPMSLPGKGQKQQRPPTL
LPELKHVTLDGKRPVPEKATSLQACDNQWGGVMFGREKVGVGHTTNGGVVKPQSATASVI
VRPTSHTHATINYAVSDSSVSQVQSGHIKSLESLSNPHSKEGNVQHKRGVLWTPMDTVHP
INMTALKGDLNTPINMTTKPINTAQPSHRATHPLINMNATCSRIDLIAEHCKRRDGGAVQ
PKMEPSPTSCCTSRDFPHLKKHRAGLVTAESRLNTHMIQPQHTTHPLNAMKHTSHLSNSR
CGTCTTLSTHTVCSTHASEREKESVFNTSTSECLRLASGTSSPAPTTKQGLLANEQIPAS
AVTNQSVQFSQNNYHKLKKAWLTRHSEQDRGSAASQTLDGSKTAVTLTSTSISVPIKQEV
NGLVDNWCTQEDKDSSLDSRKSKIMDKKPTQDSWKSSLEDRNSNSNGTSFNSEDKKSVIA
YEKPVIAGKKSSLDDVKPVLDRNGKLECKESFVEDKKANEKRSTPTHIKPEREKRGEKRP
LESSGNSESGGDSGNESESGGSGRRFKRASKSSFKIKPNDNQKKKVDEEEKEEEEEAKPN
GTLQSANDKPQQRLANSNGIPRSVLKDWRKVRKLKQTGETFLQDDSCKEIGTNVQKCREC
RLDRSRKSQEPAISPVFCRFYYFRRLSFSKNGVVRADGFSVSEQTDEEAVTVWTGSSEDE
EDKKKREMDLETSKSVLALIGEKFCQLIKTEDTAFTWVKKDTQIMWKRAVRGVREMCDAC
EATLFNMHWACHKCGFVVCMDCYKAREKKKSKDRELYVWVRCVKNQPHDLKNLMPTQIVP
ETALADMQRSMHLMKEKFGISSHCPCTDNKTLNPNTATTNGLSPLSDKDQSDLKSRQIPD
QQKNSQNVTLRAHTERREKAECDSRKSVSPEQGSTLRDLLTSTAGKLRLGSAGGAFAPVF
NMSEQVTQNTRMPNILDDIIASVVENKIPATKMARTGLNQDLLPEEEMRQRPEGVKLDES
PLADTHTVVPHDWLGNHRLLWLKDHRHQGNQRLFKENWTQEQPVLVSGLHKSLNTNLWKP
EHFSREFSSLHSDLYNCRDGSVTNSKVKEFWDGFEDVSKRPKSAKGESVVYRLKDWPSGE
EFLALMPARYHDVMKSLPVPEYTDPEAHLNLASHLPSFFIRPDLGPRLCCAHGITTCPEQ
DFGTSNLHVEISDTMSILVYVGVAKGNGAPSKTGVLKLLEGEFLDESVKKRLKDPNEMPG
ALWHIYMSKDLQKIQEFLQKVAAEQQTEADPGTDSDSEWDSDADPLREGGWYLSPRLRKK
LQEEYGVESRTLLQFHGDAVIIPAGALHQVMNLHSCIQVNVDFVSPEHAHNSYYLTQELR
LLKDQVNYEDKLQVKNIFYHSVKDAVATLRKHLKENTDELKQEES
NT seq
7878 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagctggtggggaagcgctgcctgtgcgtaagcggcggagagtcgctggag
ctcgcgggtatctcgcgctggacctggagagccggagtcatccgcgcgatcactgactca
cctgcgctgacggtgtgtgtgcactgggacggcgagcagagcgcggagaggaagtggagg
agactccgagaggaatgtgaggtggttttgttggagcaggaactcgtctgggccgccaaa
agaaccggcacaagcggcagcagcagtgcccaggagaagagaagactgcaacccgccctg
agattccggcctctgattggtcagtcatgcgtggaaggcttgtcggtggtggagttcatc
tctgacagacagctggagttctacacggaaaaggaggatctccagcctttcgaggatgaa
gtgggcgatggaaatccggctgtgagagatgatccatctctgcaggaacaggtccaggcc
tggctcaaacagaaccaattccagaacattcttcagcaaggtgcttgttctcttaagggc
cttagagtgaaagtgttcagacaggagtccaaaacccagtggcttcctggagtcatcaca
catcacgaccagaacaatagaactgttgctgtcatgactgaccaggttcgagagactgtg
aatgtagatccgtcgctggttcatgtggtgttactagatgatatcacccactccttgcta
atgggagacaactcaaaacacaaatcatacatcaccaagatcaataggatttttcttggc
acagaaagcatatcaaataacactacaacaaatgaacaggtgtgcatctccaggccagtg
cagcagcaatctgtgctgagcgcacagaactgcggcatggaagacgatgaaaaagaagga
atgagggacggaaagaggagtgatgagggaagagattcttccaaatctaaaaacagcaat
ggtgataggaaaaggaagaaagaagatgaggaaaaagatgacaagcagagaacaagatgt
gggttgaagaggttgaaagcgagcagtgtggtgtccgacctgtctgagaacactgattct
gaaaattccagctgcagaatgcaggattcatcctcggattcaggatcaaagagacagctg
aaacagcattacacttcaaagagatcattggactgtgaggttcacctctcccataaaggc
ggggaaccttcccccggccaattaggagagtgcgagactcaaaaattgggaaaaactcct
ccatccgatttccctagtgcatcctgcaatgggacattcaggaaaacagaggcacaggag
tgtgctgctggtgtcagtggtgggaaatctgatgagaaaggtgatggaggaacgacagaa
atagaggacaggactgagggggcgtctcgggaggactcggaggccgtgtctgcgctgctg
gcatcccaagagagtgagcagctggtctccatggaaaccacatgtgtgctgctacatgca
tcacctctggagtgtgaaggagcggaaggtgagcatgagatgtcgacaaatgatccagag
gtcagagggtcagagttcacccacgcagaggctagggggtcagagtttaaccaatcagag
gtcaagaggtcagaatttctccattctgtggctattaccacaagcaatgacactgcggtc
acagtagaagaggagccaaggagtgcatcccctcactctcctgtcaaaccttgcagcaaa
aaggaggatgtagactctaaacagagatgttctccagcagctgtgaacgcagaatatgga
cctgtcatctctttggaagctacccataagcctagtgtgcacgccagtccttgctcctct
cccgagatcatattgaaacctcagaatgtacaggagatgtccagacagaagcagagtgca
tctctagagatgttgaaagaggacactcctctgcctaaatctatggacagaacccttagc
agccttaaaatggcacctaatctgaaaatgacctgctctgcaactccggtcctgactcgg
accccttctccatccccaaaccgatccagaaccccaacacattctcctccctgtacacct
aatcgcactccgactccagacaagtccaccaaaagtcccctcattgttgacaggaaggag
cctttcactatatacagagaccctgctttagtcagggcggagcttgaggcccaccccacc
tacatccagccccctcacacacccccaaaccccaaacaccacctgaaagcaccatctccc
tcctccagctcacccagccttacccctacttcctcccacagcaagctactgagtccctcc
cctcatcctgcacatctctctcccattcccctccactcccagcctcccctctgctccctg
agcacaccccactcaaccatccctcacccgcacctccttccatcccttctgccggcactg
cccccgtctggcgcactcttagctggacatcctcgtatcggagctatgggacttccccac
catcccttagccctttcaggtaacccatctctcctgggccagacctctggtgcagctcct
ctggcacctcttggcctctatcccctcctgtggcctcctttccccaatggagcccatagc
taccctggactgggcctgcaagcatccaaatggacacacccagatggcgctggtatctct
gacagcaacgtgaggaggaaccccccaagcccttggatttctcaacccacccctgttact
aatgcagacggtcaagggatgcaacccccactccccatccgaccctccagtgcggaccct
cagagagcatctaggagcactcaacattgcgtgccctcctccaaaaccacagaagagctg
gatagaagagccgtcgccgagagcacactcatccacactcacctcaagtctgaacaggag
cgtgtccgtgcagcattgggcaaaaatgggcagagttactccccagtcccccctgagtcg
cctccaagtcgaaccaaacagccacttgttgtttatgatctcacaggtgagagacccaac
cgctaccaagaagagaaccggcgcattcttctggagagcagtgaggtggcaccattcact
gctaaactgggctcggatagggaaccgcgataccctagaagccccacatctgcccttcct
tccaaggagagggagagagagatggacagagagagaaagagagatgtgcacgcattcaga
cacactcttcctcctcggccacattcggcccatcccacaccaaccctcactccgagcagc
tactacacatctctgtccaacagcatagagaacaagcctccacagcgcagagtgccagcc
agcaaagaactgtatgagaggctcagtgccagcaacacagttacccctgtcttaacttcc
tccagctcacaagtctcaataagagccagacctccgcctctcataaaacgccaccacgag
aaagaagaaggtctcctgggaaagatcacagagcaacttgcacataaagcatcttccatg
gaagcagtagaggtagcaactgtggagagaagggggccaggctcttctctcatttctgtc
tcctcttgtccacgcaacgtgcctttactccaccgtgcccctattttccaccctccggca
ccaaccattttagtttctaaagattctggacatggcagattgtccccacctactctcaca
cccattcagccaatgagtttgcctggaaaaggtcagaagcaacagaggccacccaccctg
ttgcctgagctcaaacatgtcaccttagatggtaaaagacctgtgccagagaaagcaacg
tcattacaggcctgtgataaccaatggggtggagtcatgtttggcagagagaaagtaggt
gttgggcacacaacaaatggaggtgtagtcaaacctcagtcggccactgcgtcagtcatt
gtacgtccaacaagtcacacacatgcaacaataaattacgcagtgtccgacagctcagtt
tcccaggtgcagtctggccacataaagtcattggaaagtttgtccaatccacactctaag
gagggcaatgttcagcataagagaggtgtcctgtggactccaatggatactgttcaccct
atcaacatgactgctctaaagggagatctcaacacacccataaacatgacaaccaaacct
attaacacagctcaaccgagtcacagagcgacacaccccttaataaatatgaatgccaca
tgctctaggatagacctaatcgcagaacactgcaagagaagagatggtggagccgttcaa
ccgaagatggagccctctcctacctcttgttgcacttctagagacttccctcatctgaag
aaacacagagctggactagttactgctgaatctagacttaacacacatatgattcagcct
caacacactacacatcctttaaacgctatgaaacatacctctcacctctcaaatagtagg
tgtgggacttgcactacactctctacacacactgtgtgttctacacatgcttctgaaaga
gaaaaagagtctgtattcaacactagcacttctgaatgtctcagactggcatcagggact
tctagccctgcaccaacaaccaaacaaggtttgctagccaatgagcagatacctgcttca
gctgtaaccaaccagtcagttcaattcagtcagaacaactaccataaactgaaaaaagcc
tggctgacacgccattctgagcaagatagaggcagtgcggcctcccagacactagatggc
agtaagacagctgtaactttgaccagcacaagcatctctgtgccaatcaaacaggaagtg
aatggactggtggataattggtgcactcaggaggacaaagattcctccttagacagcaga
aagtccaaaataatggacaagaagcctactcaagacagctggaagtctagtttagaggac
aggaattctaatagtaatggtacaagtttcaattcagaggacaaaaaatctgttatagcc
tatgagaaaccagtgatagcaggcaagaagtcttccttggatgatgttaaacctgtcttg
gacagaaatggaaagctggagtgtaaggagtcctttgtggaggacaagaaagcaaatgaa
aaacgatcaacccctacacatataaagcctgaaagggagaaacgaggcgagaaacgccca
ttagagtccagcggtaacagcgaaagtggaggagactccggcaatgaaagcgagagtggt
ggatcaggacgaaggtttaaacgggcatctaagtcctcttttaaaataaagccgaatgac
aaccagaagaagaaagtagatgaggaggaaaaggaagaagaggaagaggccaaacccaat
ggaactttgcaaagtgcaaatgataagcctcaacagaggctcgctaacagcaatggcatc
cctcgctctgtgctgaaggactggaggaaggtgagaaagctcaagcaaactggagaaact
ttcctgcaggacgactcatgtaaagagatcgggaccaacgtgcagaaatgccgagagtgt
cgcttggatcgctcacgtaaatctcaggagcctgccatctcacccgtcttctgccgattt
tactacttccgacgtctgtcgttcagtaagaatggcgttgtccgtgcggacgggttttct
gtgtctgagcagacagatgaggaggcggttacagtgtggacgggcagctcagaggacgag
gaggataaaaagaagagagagatggaccttgagacatcaaaatctgtccttgcgctcatc
ggagaaaagttctgccagctcataaagacagaggacactgctttcacctgggtcaagaaa
gacactcagatcatgtggaagcgagcggtgagaggtgtgagggagatgtgtgatgcatgc
gaggccactctcttcaacatgcactgggcgtgtcacaaatgtggctttgtggtttgcatg
gactgctacaaagccagggagaagaagaaatccaaagatagggagctctatgtctgggtc
cgatgcgtgaagaaccagcctcatgacctaaagaacctaatgcctactcagattgtacct
gaaacagcgttggcggacatgcagcgctctatgcacttgatgaaagaaaagtttggaatc
tcatcccattgtccctgcactgacaacaaaaccctcaaccccaacacggcaactaccaac
ggactctcaccactttcagacaaagatcagagtgacttgaagagccgacagattccagat
cagcagaagaactcacagaatgtcacactgagagcgcacactgagagaagagagaaggca
gagtgtgacagtaggaagtctgtgagccctgaacaaggatcaacattgcgtgaccttttg
acctccacagctgggaagttacgtcttgggtctgctggaggtgcctttgcaccagttttc
aacatgtcggaacaggtaacccagaacactcgcatgcccaacatcctggatgacatcatt
gcttctgtagtagaaaataagattcccgctacaaagatggccaggacggggctgaatcag
gatttgctgccagaggaggagatgaggcagcggccagagggggtgaagcttgacgaaagc
ccattggctgatacccacaccgttgtccctcacgattggctaggaaaccaccgactgctt
tggctcaaagatcatcgtcaccaaggcaaccaaagactgttcaaagaaaactggacacaa
gagcagccagtgctggtgtctggattgcacaagagtttgaacactaatctgtggaagcct
gagcacttcagtcgtgagttctccagcctccacagtgacctctacaattgcagagatggg
agtgtcacaaactccaaggtcaaggagttctgggatggttttgaagatgtgtcaaagagg
cctaaatctgctaaaggggagtcagtggtgtatagactgaaagactggccatcaggggag
gagtttttggcactcatgcctgccagatatcatgatgtgatgaagtctttgccggtacca
gagtacacagacccagaggctcatctgaaccttgcctcacatctgccctccttcttcatt
cgacccgaccttggtcctcgcctctgctgcgcccacggtataacaacatgtccagagcaa
gatttcgggaccagtaatctacatgttgaaatctccgacaccatgagtattctggtatat
gtcggggtggccaaaggaaatggagccccatccaaaacaggtgtattgaagctcttggag
ggagaatttctggatgagagtgtaaagaaacgactgaaagaccctaatgagatgccaggt
gctctgtggcacatctacatgagtaaagacctacaaaagatccaggagttcctacaaaag
gttgctgctgagcagcagactgaagcagatccagggacggactcggactcagagtgggac
agtgatgccgaccccctgcgtgagggcggatggtatctgagccccaggctgagaaagaag
ttacaggaggaatatggcgttgagagccgcacactcctccagttccatggagatgctgtt
atcatccctgctggagctctgcaccaggtgatgaatctgcacagttgcatccaagtgaat
gtagactttgtgtcccctgaacatgcgcacaactcctattatctaactcaagagctccgc
cttctcaaagaccaagtgaattatgaagacaaactccaggtgaagaacatcttttatcac
tctgtgaaagatgctgtggccacattgaggaaacatttgaaggagaacacagacgagcta
aaacaggaggagtcctga
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integrated database retrieval system
