Ctenopharyngodon idella (grass carp): 127498340
Help
Entry
127498340 CDS
T08802
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127498340
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Meiosis-specific proteins
Others
127498340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
KTI12
nSTAND3
ATPase_2
AAA_21
AAA_29
Motif
Other DBs
NCBI-GeneID:
127498340
NCBI-ProteinID:
XP_051723566
LinkDB
All DBs
Position
17:14573184..14587993
Genome browser
AA seq
930 aa
AA seq
DB search
MLCSSTEEVTPGSSSEPGPCSSTVTPHNLFSYSQVIRRQQYPQSSSGLLTSHGSDDVRNS
RCAGSSTATDTGAQSAVFTETTPTGAQWHVCGRADRISSSVGSSVHSWSSNTPHLKTTPA
LSHHGQTPQRDLNMTTSSSASACHASSMIVAVVEGRGLARGEIGMASINVKCPELVLSQF
ADTGTYAKVITKLHNLMPLEILMPDTASVKGQGTKLYNLITETFPSVTFTAVLRRYFNEK
KGLEYIQQLCVPEFSTVLMEVQTKYYCLASASALLKYFEFVQNSIYAPKSLKVVFTGSEQ
TAMIDAISASNLELVVNQRDHRSEHTLFGVLNYTKTAGGERRLRSNILEPLLDVVTINSR
LDTIQELLQNEELFFGLKTAIAHFLDIDELLSALVQVPKQETVPVAEAKITQVIQLKHIL
ELVPSLKMVLQPSKTALLKAYCTSLEDSRFNIILDQIKSVITDDTSYMKGSLTMRTQKCY
AVRPNVSEFLDIARRAYTEVIDDITGLVAQLGEKYNLPLRTSFSKARGFFIQMRLEGRVL
PGGKLPEEFIKVTRQKSNYGFTTVDLMKMNDHCEEALKDIFHMSYVVVSRLLSEVYEHIH
CLYKLSDAVSMLDMLLSLAHACTVSDYVRPEFTDTLAIKLSRHPILERISGTQPISNNIY
VSEGSNFVIITGPNMSGKSTYLKQVALLQIMAQIGSFLPAEYASVRIADQIFTRIGVDDD
FETNSSTFMVEMKEVSYIIHNVSDNSLIIIDELGRGTSPEEGIGVCHSICEFLINYKAFT
LFATHFLELCQLQTLYPNVENHHMQVQHVRAEDGRAERVVYTYQLSQGHSEERNYGIRAA
EMTNLPEEVIEEAKTVAAKISQKLWAKHYSDPATINQRANYRLATRLLQTARNSRLDSEG
LRHHLKGLKRQYEAELHNATESVENLEIEE
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgtagcagcactgaagaggtgacaccaggttcaagctctgaacccggcccctgc
agcagcactgtaaccccgcataacctgttcagctacagtcaggtaatccgtagacagcag
tatcctcagtcatcttctggcctactgacttcacacggatccgatgatgtcaggaacagt
cggtgtgctggatcaagcactgccactgatactggtgctcagagtgctgtgttcacagaa
acaacaccgactggagctcagtggcatgtctgtggaagagcagacaggatcagctcttct
gtgggttcatctgtccactcctggagctccaacactccacatctgaagaccacacctgca
ctctcacaccatggccaaacccctcagagagacctcaacatgacaacgtcttcatctgcg
tctgcgtgtcatgcgtcctctatgatagtggctgtggtggagggacgtggtttagctcgg
ggggagattggcatggccagtatcaacgtgaaatgtccagagctggtgctctcacagttt
gcagacactggaacttatgctaaggtaattaccaagctgcataacttgatgcctctggag
attctgatgccagacactgctagtgtgaaagggcaaggaaccaaactctacaacctcatc
acggagacattcccgtcagtcacattcactgccgttctgaggaggtacttcaacgagaag
aagggcctggagtacatacaacagctctgtgtccctgagttcagcactgtactgatggag
gtgcaaaccaaatactactgcctggcatctgcatctgccctgctgaaatactttgagttt
gttcagaactcaatatatgcccctaagtcactgaaagtggtcttcactggcagtgagcag
acagccatgattgacgcgatatcagccagcaacttggagctagtagtgaaccagagagat
cacagaagtgagcacactctgtttggggtcttaaactacactaagactgccggtggagag
cggcggttacgctccaatattcttgagcccctgctggatgtggtcactatcaattcacgt
ttggacaccatacaggagctgttgcagaatgaggagctcttctttggtctgaagactgcc
attgcacacttcctggatatagatgagctgctgtctgctcttgttcaggtcccaaagcaa
gagacggtaccggtggctgaagcaaaaataacgcaagtaattcagctaaagcacattcta
gaactggtcccatcactgaagatggtgctgcaaccttccaaaacagccttgttgaaagca
tattgtacctcacttgaagacagcaggttcaacatcattctggatcagatcaaatcagtg
attactgatgacaccagctatatgaaaggcagtttgaccatgcgcacacagaagtgctat
gctgtgcggcccaatgtcagcgaattcttagatattgcacgacgagcctacacagaggtg
atagatgacataacaggactggtggctcagcttggagagaagtataacctacctctccgg
acaagtttcagcaaagcacgtggcttctttattcaaatgaggctggagggcagggtctta
cctggagggaagttaccagaggagttcatcaaagtgactagacagaagagcaactatggg
ttcaccactgtagacctcatgaaaatgaacgaccactgtgaggaggctttgaaagacatt
tttcacatgtcttatgtggtggtgtccaggttactgagtgaggtctatgaacacatccac
tgcctgtacaaactgtctgatgctgtgtcaatgctggatatgctgctctctttggctcac
gcctgcactgtctcagattatgtgcgtcctgagttcactgacacattggcaataaagctg
agtcgccaccccatcctggagcgtatttctgggacacaacccatctccaacaacatctac
gtctctgagggaagcaattttgtgatcataacaggccccaacatgagtggcaagtccacc
taccttaaacaggtggcccttctccagataatggctcagataggatcctttctgcctgcg
gagtatgcctctgttcgtattgcggatcagatatttaccagaataggtgtggacgatgac
tttgagaccaactcttccacatttatggttgagatgaaagaggtgtcttacatcatccac
aatgtaagcgacaattctctcatcattattgatgagctgggccgaggcaccagtccagag
gaaggcattggtgtctgccacagcatctgtgaattcctcatcaattataaggccttcacg
ctctttgccacacactttcttgaactgtgccagttgcaaactctttaccccaacgtggag
aaccatcacatgcaggttcagcacgtccgcgcagaagatggcagagcagaaagggtggtc
tacacataccagctcagccaaggacattcagaggagcgcaactatggtataagagcagca
gagatgaccaatttaccagaagaagttattgaggaggccaaaactgtcgcagctaaaatc
agccaaaagctgtgggccaagcattatagtgaccctgccactatcaatcagagggcaaac
tatcgtctagccaccagactgctgcagacagcccgcaactcacggctggactcggagggc
ctacgtcaccatctgaagggcttgaaaagacagtatgaggctgaacttcataatgctaca
gagtcagtggagaatctagagatagaggagtga
DBGET
integrated database retrieval system
