KEGG   Ctenopharyngodon idella (grass carp): 127498355
Entry
127498355         CDS       T08802                                 
Name
(RefSeq) exportin-1 isoform X1
  KO
K14290  exportin-1
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03008  Ribosome biogenesis in eukaryotes
cide03013  Nucleocytoplasmic transport
cide03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    127498355
   03008 Ribosome biogenesis in eukaryotes
    127498355
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    127498355
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cide03019]
    127498355
   03009 Ribosome biogenesis [BR:cide03009]
    127498355
   03016 Transfer RNA biogenesis [BR:cide03016]
    127498355
   03036 Chromosome and associated proteins [BR:cide03036]
    127498355
Messenger RNA biogenesis [BR:cide03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     127498355
Ribosome biogenesis [BR:cide03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    127498355
  Pre-60S particles
    127498355
Transfer RNA biogenesis [BR:cide03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    127498355
Chromosome and associated proteins [BR:cide03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     127498355
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd mTOR_dom Hydrolase_3 BspA_v
Other DBs
NCBI-GeneID: 127498355
NCBI-ProteinID: XP_051723583
LinkDB
Position
17:complement(5698671..5717507)
AA seq 1071 aa
MPAIMTMLADHAARQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDAANV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVSLFTLTMMQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITGEIPQIFDAVFECTLNMINKDFEE
YPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISA
TLNPTNPVNNQVFIQEYVANLLKSAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEEREASLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq 3216 nt   +upstreamnt  +downstreamnt
atgccagcaattatgacaatgttagccgaccacgcagccagacagctgctggactttaac
cagaaactggatatcaacctgctggataatgtggtcaactgcctgtaccatggagtcggg
ccacagcaaagaatggcccaggaggtgctgactcatttgaaggagcacccagatgcgtgg
acacgagttgacaccattctagagttctctcagaatatgaacaccaaatactatgctctg
cagattctggaaacagttattaaaacaagatggaagattctgcccagaaaccagtgtgaa
ggcattaaaaagtatgttgtgggcctcattatcaagacatcatcagatgcagccaatgtt
gagaaagaaaaggtgtacattggaaaactcaacatgatattagtacagatcctgaagcag
gagtggccaaaacactggcccacatttatcagtgacattgttggagcgagccgcaccagt
gagagcctttgccagaacaacatgatcattctgaaacttctcagtgaagaggtgtttgac
ttctccagtggccagatgactcaagtgaaagccaaacacctgaaagacagcatgtgcaac
gagttctctcagatattccagttgtgccagtttgtgatggaaaattcccagaatgctcca
cttgtgcatgctaccttagagaccctgctgaggtttctcaactggattcccttgggctat
atctttgaaactaaactcatcagtactcttgtgtataagtttttaaacgtgccgatgttt
cgcaatgtgacactgaagtgcttgactgagatagcaggagtcagtgtcagccagtacgaa
gagcagttcgtcagtctcttcactctgaccatgatgcagctcaaacagatgcttccactg
aacaccaacatccggctggcgtatgcaaacggtaaagatgacgagcaaaacttcattcag
aacctcagcctgttcctgtgcaccttcctcaaagagcacggacagctgatagaaaagaga
ctgaacctcagagagactcttatggaggctctacattatatgttgctggtgtcagaggtg
gaggagaccgagatctttaagatctgtttggagtactggaaccaccttgcagctgagctg
tacagagagagtcctttctcaacgtccacctctcccctactctcagggagtcaacacttt
gatgtaccgccccgcagacaactctacctacctgtgctgtctaaggtgcgtttgttgatg
gtgagccgcatggccaagccagaggaagtgctagtggtggagaacgatcagggcgaggtg
gttcgagagttcatgaaggatacagactccatcaacctctacaagaacatgagggaaaca
cttgtttatcttacccatctggattatgctgacacagagcgtattatgacagaaaagctt
cataatcaggtgaacggtacagagtggtcctggaagaacctgaacacgctgtgctgggct
attggttccatcagtggagccatgcatgaagaggatgagaagcggttcctcgtcactgtc
ataaaggacctgctgggtctttgtgagcagaagagaggaaaggataacaaggccatcatt
gcctccaacatcatgtacatagtgggccagtacccacggttcctacgggcacactggaaa
ttcctgaagactgtcgtcaataaattgtttgagtttatgcatgaaacccatgatggagtg
caggacatggcgtgtgacacgttcattaagatagctcagaagtgcaggaggcattttgtg
caggtgcaggtgggagaggtgatgcccttcattgatgagatcctcaacaacatcaacacc
atcatctgtgacctgcagccccagcaggtccatacgttttatgaagctgtcggctatatg
attggagcacagaccgaccaggctgtacaggaacacctgatagagaagtacatgttgttg
cctaaccaggtgtgggacagcattattcagcaggcaaccaagaatgtggacatcctgaag
gacccggagacagtgaagcagttgggcagcatcctgaagaccaacgtcagagcgtgtaaa
gctgtgggacacccttttgttattcagctgggccgcatctacctggacatgctcaacgta
tacaagtgcctcagtgaaaacatctctgctgccatccagaccaacggtgagatggtgaca
aagcagcctctcatcaggagcatgcgcacagtgaagagagagactctgaagctgatctca
ggctgggtcagccgttccaatgatccacagatggtgggggagaactttgtccctcccctg
ttggatgctgtgctcattgattaccagcgcaatgtcccagcagcaagagaaccggaagtg
cttagtaccatggcaacaatcgtaaacaaattgggtggacacattactggagagatccca
cagatatttgatgcagtgtttgagtgcacattaaacatgatcaacaaagattttgaagaa
tacccagaacaccggacacattttttctacctgctgcaggcggtgaactctcactgtttc
ccagcattcctggccatcccaccagcccagtttaagcttgtgcttgactccattatatgg
gcttttaagcacactatgagaaacgtggcagacactggccttcagattctctacacgctg
ctgcagaacgtggcccaagaggaggcggcagctcagagcttctatcagacatacttctgt
gacatcctacaacacatcttctccgttgtcacggatacatcacatacagcaggtttgacc
atgcacgcttctattctggcgtacatgtttaaccttgtcgaggaaggaaaaatcagtgca
actctgaaccccacaaacccagtaaacaaccaagtattcatccaggagtatgtggccaac
ttgcttaaatcagctttcccccacttacaagatgcccaggtgaaagtatttgtgactggc
ctgttcagtttaaaccaagacatcccagcattcaaagaacacttgagggatttccttgta
cagatcaaggaatttgcaggcgaggacacctctgacctgtttctggaggagagggaggct
tcactgcgccaggcccaggaggagaaacacaagctgcagatgtccgtgcctggcatcctc
aatcctcacgaaatacccgaggagatgtgcgactga

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