Ctenopharyngodon idella (grass carp): 127498387
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Entry
127498387 CDS
T08802
Name
(RefSeq) sorting nexin-6
KO
K17920
sorting nexin-5/6/32
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127498387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127498387
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cide04990
]
127498387
Membrane trafficking [BR:
cide04131
]
Endocytosis
Macropinocytosis
Sorting nexins
127498387
Domain-containing proteins not elsewhere classified [BR:
cide04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
127498387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
FAN1_HTH
AceES-2
DUF3381
Motif
Other DBs
NCBI-GeneID:
127498387
NCBI-ProteinID:
XP_051723628
LinkDB
All DBs
Position
17:complement(3430558..3441694)
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AA seq
468 aa
AA seq
DB search
MSCKMRTSSRVHTKETKKEKLKVKTLSSLFVLEHLKAPPLRSPASLTSHTLRHIHTPPAA
AMMQEGLDDGPDFLSEEDRGPRAVNVDLQTDATLQVDISDALSERDKVKFTVHTKSTLPN
FKQNEFSVVRQHEEFIWLHDSFVENEEYAGYIIPPAPPRPDFDASREKLQKLGEGEGSMT
KEEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPVLRKDLNFHVFLEYNQDLSVRGK
NKKERLEDFFKNVVKSADGVLVAGVKDVDDFFEHEKTFLLEYHNRVKDASAKSDRMIRSH
KSAADDINRIASTLYTLGTQDSTDLCKFFLKVSELFEKTRKIEARVAADEDLKLADLLKY
YLRESQAAKDLLYRRGRALVDYENANKALDKARAKNKDVLQAETTQQVCCQKFEKISESA
KQELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQSCLGVLKGDT
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgtaaaatgagaacaagtagtagagtacatacaaaagaaaccaagaaagaaaag
ctaaaagtcaaaaccttgagcagtttgtttgtacttgaacacttgaaggctccacctctc
agatctcctgcctcactgacgtcacacacactccgccacattcatactccacccgcagca
gccatgatgcaagaagggctggacgatggtcccgatttcctctcggaagaggacagagga
cccagggcagtgaatgtggatcttcaaactgacgccacactacaggtggacatctcagac
gctctgagtgagagagataaggtcaagttcaccgtccacaccaagagcactctacctaat
ttcaagcagaatgaattttctgtggtcagacagcatgaagaatttatctggctccacgac
tcgttcgtggaaaacgaagaatacgcaggttatattattccgcctgctcctccaagaccg
gatttcgatgcatcacgggagaaacttcagaagctgggtgaaggtgaaggatctatgacc
aaggaggagttcactaagatgaaacaagaactggaggctgaatatctggccatcttcaag
aagaccgtggcaatgcatgaggtctttctgtgccgtgtcgctgcccatcccgttctacgc
aaagacttgaactttcatgttttcttagagtacaatcaagacctgagtgtacgagggaaa
aacaagaaggaaaggctggaggatttcttcaagaacgtggtgaagtctgcagatggggtt
cttgtggcaggagtgaaggacgttgatgatttctttgaacacgagaagacattcctatta
gagtaccacaaccgtgtcaaagacgcgtctgccaaatctgatcgaatgatcaggtctcac
aaaagtgcggcggatgatatcaacagaatcgcctccacgctgtacaccttaggaacccaa
gactccacagatctgtgcaaatttttcctgaaagtatcagaactttttgagaaaacacgg
aaaattgaagcgcgcgtagcggccgatgaggatttgaaacttgccgacttgttgaagtac
tacctcagagagtcgcaagccgctaaggacctcctgtacagacgaggaagagcattagtt
gattatgagaatgctaataaagctctggacaaagccagagctaagaacaaggacgtcctc
caagcagaaaccacacagcaagtgtgttgtcagaagtttgagaaaatctctgaatctgca
aaacaagaattgatagatttcaagacacgacgagtagcagcattcagaaagaacttggtg
gaactggccgagctggaactcaaacatgcaaaggggaatctacaattgctgcagagctgt
ttgggggtcctgaaaggggacacttag
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