KEGG   Ctenopharyngodon idella (grass carp): 127498599
Entry
127498599         CDS       T08802                                 
Name
(RefSeq) LOW QUALITY PROTEIN: claudin-20
  KO
K06087  claudin
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03272  Virion - Hepatitis viruses
cide04382  Cornified envelope formation
cide04514  Cell adhesion molecules
cide04530  Tight junction
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    127498599
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    127498599
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    127498599
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    127498599
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cide03037]
    127498599
   04147 Exosome [BR:cide04147]
    127498599
   04515 Cell adhesion molecules [BR:cide04515]
    127498599
Cilium and associated proteins [BR:cide03037]
 Other cilia and associated proteins
  Stereociliary proteins
   127498599
Exosome [BR:cide04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   127498599
  Exosomal proteins of colorectal cancer cells
   127498599
Cell adhesion molecules [BR:cide04515]
 Immunoglobulin superfamily
  L1 family
   127498599
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 Clc-like tRNA_NucTran2_2
Other DBs
NCBI-GeneID: 127498599
NCBI-ProteinID: XP_051724088
LinkDB
Position
17:31330448..31342922
AA seq 243 aa
MASTGTQIFAFVLALLGILGATVATLLPNWKVSADVGSNIITAISQMQGLWMDCTWYSTG
MFSCTLKYSVLALPAYLQTARTTMVLSCVLAALGLCLASLGLKCTRWGGDGRAKRHAAMA
AGTCFLASGFLCLVPASWYTNEVIVSFLDVNVPESNKFEPGGAVYVAFVSSGFLFVGGSI
FCLSCSGKRHGPQDLILLPPDKLLLQQQQQLLQQQQQQEQLQHQYCSLSPLDNKTGYSLQ
DYV
NT seq 732 nt   +upstreamnt  +downstreamnt
atggcgtccacaggcacgcagatcttcgccttcgtgctggcattgttaggcatcctaggt
gccacggtggccacgttactgcccaactggaaggtgagcgcggatgtcggttcgaacatc
atcactgccatctcgcagatgcaggggctgtggatggactgcacctggtacagcacgggc
atgttcagctgtacgctaaaatactctgtgctggcgctgcccgcatacctgcagacggca
cgcaccactatggtgctttcatgcgtgttggcagcactgggattgtgtttggcctctttg
ggtctgaagtgcactcggtggggcggtgacggccgtgctaaacgccacgctgccatggca
gccggcacctgctttctggcctctggcttcctctgcctcgttcccgcctcctggtacaca
aacgaggtgattgtcagtttccttgacgtcaatgtgcccgaaagcaacaagtttgagcca
ggcggcgccgtctacgtagccttcgtctcgtctggtttccttttcgtgggtggatccatt
ttctgtctatcctgctcgggtaagagacacggcccccaggatttgatacttctccctcca
gacaaactcctcttgcagcagcaacaacaattgctgcaacaacagcagcaacaggagcag
ctccagcaccagtactgctccctctctccgctggacaacaagaccggctacagcctgcag
gactatgtataa

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