Ctenopharyngodon idella (grass carp): 127498760
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Entry
127498760 CDS
T08802
Name
(RefSeq) rho guanine nucleotide exchange factor 10 isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127498760
03036 Chromosome and associated proteins [BR:
cide03036
]
127498760
Membrane trafficking [BR:
cide04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
127498760
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
127498760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
DUF6059
Hanta_Gc_C
Motif
Other DBs
NCBI-GeneID:
127498760
NCBI-ProteinID:
XP_051724413
LinkDB
All DBs
Position
17:complement(4723257..4780929)
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AA seq
1420 aa
AA seq
DB search
MDVEDFPPPPPDLLDDEDEGERFEFDDSGDEAPEADRPPPEPEGMSVPPPCSTAAGDAPM
NGTSPNPENLFTAEADLPPPPQNCLTNNRPLAHAPFPQGDLPPPPIELCHNAAEGQDRDL
PPPPEGATGAAAHSKQDENRGAGLVPTSASTSKPKVSPYSVIDITPIQQQLLSEQSDPPS
SPPANESERDIQDVPSSPGLSYGYSVPVPCGYATPSNVPVIPPTYTTPVIIRHFSMDEDV
TVVGAGNTPVDSVFSEECPVIREEDALTKWVSDPANTAWMDSPDEVIYDDVPRENSGSTT
DPDEMIYDDVEFGEEGGSSSLDNGWSSSEFESYEEASDTENGHGENGLPDAFVRGRAPSK
KTHLSEDLTRLKEHYERKMRDLMANTVGTVELQQLKHKHEQKMQRLVKAAKDGTKDGLQK
TKAAVRKGRSFIRTRSLCQEKKPSCFDEESDLFIEVECFNVDPVLKPAPDGLSQHQVMRR
CILEMILESEKNYLEALKRILEQYEKPLAEIEPRLLSDRKCKVVFYRIREILQCHALFQM
ALASRVSDWDELEMIGDMFVASFSKSMVLDAYSEYVNNFSLAMGVVRKACATKPCFLDFL
KQRQETSKDRLTLYGLMMKPIQRFPQFILLLQDMLKNTPVGHPDRLPLQMALTELETLAE
KLNERKREADQRCEIRHIAKAMNEHYLNKLLSSGSRYLIRSDDVVETVYNDRGEIIKTKE
RRVFLLNDVLMCATPNQRPSQDGVSVGTGGEGVPSGQRFLLKWSVPLSLVEVVEFGSSEE
IGDSRFPPLHSGDKVVINAKPNKLYMGPGQLYQDLQNLIHDLGLVNQISTMISSLKGNYQ
NVNGTVAQDWVSGLQRLILKKEEEIRAADRCRIQLQLPGKQDKYGRPTFFTAVFNTFSPS
IKQAWISNLQMAKLALQEDNIQGWFCAEDDGNQMRKQNHPLLLKQMAVVMSKLQEFKVEC
AVHNPEPHVNTDTTADLPVMGHGCVWVASCTNHMGQVSIVALQNSNPKVTECFNVESRIL
CMTYVPLDEPLENSEGKPEDRKANDTPTVCLGMEEGSISVYKSSQRSKKVRLQHFFSPDK
SSVTCLVHKSGCLYAGLVSGSLVVYSRADDGSWVESGARVLKLGVLPVKALLVVGEHVWA
SSGGQIFIISTQTHTVERQFEAHQEEGMIVSHMVVAGVGIWISFSSGSTLRLFHTETLDH
LQDINIATAVNNILPGQQRVSVSSLLVCHGLLLVGTNLGVTVALSVPRLQGIPKVTGRGM
VSFHAYHGPVKFLTMATAVCNVSQATMATLTSNTPSQCQPGAQEVEGTQRDENCSGLGHS
SASSHSHASVLQDSLSSSCGSLALSQGSLEHGPEDGAIYDLLNEPAHFQKSKQTERVNVS
SLLVVSGGLGHRRINRKTKPSKHEEMVSTVMVWQIPLPNL
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggaggatttcccccctcctccacctgacctgttagatgacgaagatgaaggt
gagaggtttgagtttgacgacagtggtgatgaagcccccgaggcggatcggccaccccct
gaacctgagggaatgtccgtgcctccaccctgctcaacagcagctggggacgcacccatg
aatggaacaagtccaaacccagagaacctattcactgcagaggctgatctgccccctcca
cctcagaactgcctcactaataacaggcctttggctcatgcacccttcccacagggtgat
ctaccccctcctcccatagagctttgtcacaatgcagcagaaggccaggacagagacctt
ccaccaccaccagagggcgctacaggagctgctgctcacagcaagcaggatgagaacaga
ggtgccggtttggttcccacctctgcgtccacctccaagcccaaagtcagcccctactct
gtgattgacatcacccctatccagcagcagctgctgtcagagcagagcgaccctccctcc
tctcccccagccaatgagagtgaaagagacattcaggatgtacccagtagccctgggttg
tcctatgggtattcagtgccagtgccctgtggttatgcaacaccctcaaatgtgccggtg
atcccaccaacctacaccaccccagttatcatccgacacttctctatggatgaagatgtg
actgtggtgggagcaggaaatactccagtggacagtgtttttagtgaagagtgtccagtc
atcagagaggaagatgctcttactaagtgggtatcagacccagcaaacacagcctggatg
gatagtccagatgaggtgatttatgatgatgtaccaagagaaaactctggatccactaca
gacccagatgagatgatctatgatgatgttgagttcggggaggagggcggcagcagctcg
ctggacaacggctggagctccagtgagtttgagagttatgaggaagccagtgacacggag
aacggacatggagagaacggcctcccagatgccttcgtcaggggccgtgcacccagcaag
aaaacacatctgtctgaagatctgacgcgtttgaaagagcactatgagagaaagatgcga
gatctcatggcaaacacagtgggaacagtagagctacagcagctcaaacacaaacacgag
cagaagatgcagcggcttgtaaaagcagctaaagatggaactaaagatggtctgcaaaaa
accaaagccgcggtgagaaaaggacgatctttcattcgcaccagatctctctgtcaagag
aagaaacccagctgctttgatgaagagtcagatctgttcatcgaggtggagtgttttaat
gttgacccagtgctgaaacctgcacctgacgggctttctcaacaccaggtgatgaggaga
tgcattctggagatgattctagagagtgagaagaactatctggaagctctgaagcgaatt
ttagagcaatatgagaaaccactggcagagattgagcctcggttactgagcgaccgcaag
tgtaaggtggtgttttatcggattcgggagatcttgcagtgccacgccctgttccagatg
gcactggccagtcgtgtgtctgactgggacgaactggagatgatcggagacatgtttgta
gcgtcgttttctaagtccatggtattggacgcttacagtgagtatgtgaataacttcagc
ttggcgatgggagtggtgcggaaggcttgtgcaactaagccctgtttcctcgacttcctt
aagcaacgtcaggagactagtaaagaccgcctgaccctctatggactgatgatgaagcct
attcaacggttccctcagtttatactgctgctgcaggacatgttaaaaaacacaccagtg
ggtcatcccgaccgtcttccgcttcagatggctctcactgaactggaaacgcttgccgaa
aaattaaacgagaggaaaagagaggccgaccagcgctgtgagatcagacacatagctaag
gctatgaatgaacattaccttaacaagctgctaagcagcggcagtcgttatctgattcgt
tctgatgacgtggtggaaaccgtttataatgatcgaggggagatcattaagactaaagaa
cgccgagtctttcttctgaatgatgtgctcatgtgtgccacccccaaccagcgcccctcc
caggatggtgtgagtgtgggaactggaggtgaaggtgttccctcaggacagcgcttcctg
ctcaagtggagtgtgcctttgagtttggtggaggtcgtggagtttggctccagtgaagag
attggcgactcccgatttccccccttacactcaggagataaagtcgtcatcaatgccaaa
cctaataaattgtatatgggtccagggcagctgtaccaggacctacagaacttgatccat
gacctgggtttggtgaaccagatctccaccatgatcagcagtctgaaggggaattatcag
aatgttaatgggacggttgctcaggattgggtttcaggtctccagcgactcattttaaag
aaagaggaagagattcgtgcagctgatcgctgtaggatacaactacagttaccagggaag
caagacaagtatggcagacccacgttcttcactgcggtctttaacactttcagtccatcc
atcaagcaagcttggatcagtaatctgcagatggctaaattggctctacaggaagacaac
atccaaggctggttttgtgctgaagatgatggtaatcaaatgaggaagcagaaccatcct
ctcttactcaagcagatggctgtggtcatgtccaaactacaggagttcaaggtggagtgt
gcagttcataacccagagcctcatgtgaacactgacaccactgcagatctgcctgttatg
ggtcatggatgtgtgtgggtggccagctgtaccaatcacatgggtcaggtctccattgtg
gcgttgcagaactcaaatcccaaagtgacagagtgttttaatgtggagtcgcgtatactc
tgtatgacatacgtgcctctggatgagcccttggaaaacagtgagggaaagcctgaggat
cgaaaagccaatgacactccaactgtgtgcctgggcatggaggaaggcagtatatctgtg
tataagagcagccaacgctctaagaaggttcgtctgcagcacttcttctcccctgataag
tccagcgtcacatgtctggtgcacaagagtgggtgtctgtatgcaggcctggtcagcggt
tctctggtcgtctactccagggctgatgacggctcctgggtcgagtcaggggcccgtgtg
ctgaagctgggggtgttgccggttaaagccctgctggtggtcggtgaacacgtttgggcc
tcatcgggagggcagatcttcatcatcagcacgcagacacacactgtggagcgtcagttt
gaagcccatcaagaagagggaatgatcgtgtctcatatggtggtggccggtgtgggcatc
tggatatccttcagcagcggatccaccctccgactcttccacactgaaactctcgaccac
ctgcaagacatcaacattgccacagcagtcaataacatactgccaggacagcagagagtc
tctgtgagcagtctgttagtgtgtcatggtctgctgttggtggggacaaatctcggggtc
acagtggccctgtctgtgcccagactacagggcatcccaaaagttacaggtcgaggaatg
gtctcttttcatgcttaccatggtccagtcaagttcctcaccatggcaacagcagtgtgt
aatgtctcgcaagcaaccatggcaactctcacctccaacacacccagccaatgccagcct
ggggcccaggaggtggagggaacccaacgcgacgaaaactgctctgggctggggcacagc
agtgcgagctctcactcacatgcttcagttctccaggactccctgtcctcctcatgtggg
tctctggctctgtctcagggctctttagagcacgggccagaagacggggcgatatatgac
ctgttgaacgagccagcgcacttccagaagtccaagcagactgagagagtaaatgtgagc
tcattgttggtggtgtctggaggtctgggacaccgcagaatcaacagaaaaacgaaaccg
tctaagcacgaggagatggtgtccactgtaatggtgtggcaaataccactaccgaacctg
tga
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