Ctenopharyngodon idella (grass carp): 127498846
Help
Entry
127498846 CDS
T08802
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127498846
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
127498846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Beta-prop_THOC3
Ctf4_C
Beta-prop_WDR5
HMG_WDHD1
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
ANAPC4_WD40
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
eIF2A
Beta-prop_Vps41
WDR90_beta-prop_4th
HMG_box
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
Tricorn_2nd
Beta-prop_WDR41
NBCH_WD40
Beta-prop_WDR75_2nd
KNTC1_N
Beta-prop_Nup120_160
DUF6476
Beta-prop_EDC4L
Motif
Other DBs
NCBI-GeneID:
127498846
NCBI-ProteinID:
XP_051724606
LinkDB
All DBs
Position
17:27965438..27987908
Genome browser
AA seq
1117 aa
AA seq
DB search
MPCERKPMRYGHSEGHTDVCFDDEGKCIVTCGSDGDVRIWESLDDDDPKSINVGEKVYSV
ALKNGKLVTAVSNNTVQIHTFPDGDPDGILTRFTTNANHVTFNASGSRVAAGSSDFLVKI
VEVADSSQQKTLRGHDAPVLSVALDPSDEFLASSSCDGSVTVWSIESQTQVAQWKVLQKS
SDVSNAKSLCRLAWQPRSGKLLAVPVDLTIQLYDKNTWTHVSTLSDDLITQVVNVVVWSP
CGKFLAAGTVGGNLLIWDVEAKLCIERQKHEKGFTVCGMAWHPSGGRIAYTDTEGCLGLL
EGVSSSSPSSSSAIQNTKATAAKETNDYDDLFDEDDDRMLDEGRSDSRSPVKKPIMDDDD
DDDDDLMPATGRLRNRGSFLDDDDNSQDPGSVKLDGLPEEDGSSAVHPAVAPAVSRPVYE
GPMPTQPQRAFQPGSTPVHLMHRFMMWNSVGIIRGYNDDQDNAIDVEFHDTAVHHAMHLT
NTLGHTMADLSQEAVLLACEGTDELASKIQCLHFSCWDTHKDWMVDLPKGEDARALCLGQ
GWAAVATSALMVRLFSIGGVQKEIFSLPGAVVCMAGHGEQLLIVYHRGTGFDGDQALGVQ
LLHLGRKRRQVIHGEPLPLSRKSYLAWMGFTAEGTPCCIDSEGVVRMLNRTLGNTWTPVC
NTRDTCKSKSDHYWVVGVYENPQQLRCIPCKGSRFPPTLPRPAVAVLPFNLPYCQTTTEK
GQMEEQYWRSMLFHNHYGFLSSNGYEIDSEGQSQAEKEQQELLMKMFALSCKLEREFRCV
ELAELMTHSVVTLAIRYASRSRRMALAQRLSELALEKANQLQEEEEQEEDEMAYQSHTSR
EYRGSNQMSSRQAQVENGCEEEEEEEEYPQEEQMDAEESETRKPRLNPFKKGGKSPERPS
PKPVSREQRVNPFKVSGAGKSLSSPAGQPRTTNVLDSMTMSSRKPATLSGTSKQGKGPVL
KPLAPKPKSKTQATLLQMSASKGNSKKQEDSQTGAEKVKPAPAATPPVSAENIENRKPKT
GFQLWLEENRKSILADNPDFEEMDVIKEGMGRFRTLSAEERLNWTERAKGDSDPKKRKRE
DEAGQVDEHMESDEGSAKKKKPLDTSAKLAAFAFNKE
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgccgtgtgaaaggaagcccatgcgttacggtcactcagaaggccacactgatgtctgc
tttgatgatgagggaaagtgtattgtgacctgtgggagtgatggtgatgtccgcatatgg
gaaagtctagatgacgatgatcccaagtctataaatgtcggggagaaggtgtattctgta
gccttgaagaatggaaagctcgttacagcggtttccaacaacacagttcagattcacact
ttcccagatggagatccagatggcatactcactcgattcaccaccaacgcaaaccacgtc
accttcaacgccagcgggtcaagagtggctgcaggctcaagcgacttcctggtgaagata
gtggaggtggcggacagcagtcagcagaagaccctacgtgggcatgatgctcccgtcctc
agtgtggctcttgacccttctgatgagttccttgcttcctccagctgtgatggatcagtc
actgtgtggtctattgagtcacagactcaagtagctcaatggaaagttctccagaagtca
agtgacgttagcaatgccaagtctctctgtagacttgcttggcagcctcgctctggaaag
ctgcttgccgtaccggtggacttgaccattcagctgtatgacaaaaacacatggacgcat
gttagcacactctctgatgacctcatcacgcaggttgttaatgttgtggtctggtcacca
tgtgggaagtttctggctgcaggaacagttggcggaaacctgttgatttgggatgtagag
gccaaactgtgtatcgagagacagaaacatgagaaagggttcactgtttgtgggatggcg
tggcatccctcagggggccggatcgcttacactgacacagagggctgcctcgggctcctg
gaaggcgtgtcgtcctcgtcgccgtcctcttcctctgctatccagaacaccaaggccact
gcagctaaagaaacaaatgattatgatgacctgtttgatgaggatgatgaccggatgctg
gacgagggcaggagtgactcgcggtctccagtgaagaaacccatcatggatgatgatgat
gacgacgatgatgacctcatgcccgccacgggcagactgcggaacagaggatccttcttg
gatgacgatgacaattctcaagatccaggctctgtaaaactggatggacttccagaggag
gatggcagcagtgctgttcatcctgctgtggcccctgcagtgtcccgtcctgtatacgag
ggtcccatgcccacacaaccccaaagagctttccagccaggatctaccccggtgcacctc
atgcatcgctttatgatgtggaactccgtgggcatcatccgtggctataatgatgatcag
gacaacgccattgatgtggaatttcacgatactgcggtccatcatgccatgcatctcacc
aacaccttgggccacaccatggctgatctatcccaggaggccgtgctgctggcctgtgag
ggaactgatgagcttgccagtaagatccagtgtttgcatttctcgtgctgggacactcat
aaggactggatggtggatctacctaaaggagaggacgcacgtgccttgtgtttgggtcag
ggctgggcggcagtggccaccagtgctctgatggtcagactgttctccatcggtggtgtg
cagaaggagatcttcagcctgcctggagctgtggtctgcatggcaggacatggagagcag
ctcctcatagtgtatcacagaggtactgggtttgatggagaccaggcccttggtgtacag
ctgctccatctcgggcggaagagaaggcaggtcatccacggagaaccgttgcctctctca
cggaagtcctacctggcatggatgggcttcactgctgagggaaccccgtgctgtattgac
tccgagggtgttgtacgtatgctgaaccggaccctggggaacacatggactcctgtctgc
aacaccagagacacctgcaagagcaaatcagaccattattgggttgttggggtttatgag
aatccacagcagctcaggtgtatcccatgtaaaggatcacgtttcccacccaccctaccc
cgccctgctgtggccgtcctgccctttaacctgccttattgccagaccaccacagagaaa
ggccaaatggaggagcagtactggcggtccatgctctttcataaccactatggctttctg
tcatccaatggttatgaaattgacagcgagggtcaatctcaggctgagaaggagcagcag
gaactgctaatgaagatgttcgctctgtcgtgtaaactggagcgagagttccggtgtgtg
gagctggctgagctcatgactcacagcgttgtgacgctcgccatccgttacgcatctcgt
tccagacgcatggccctggcacagagactcagtgaactcgccctggaaaaggccaatcag
ctgcaggaggaggaggagcaggaagaagatgagatggcctatcagagccacaccagtaga
gaatatagaggatccaatcagatgagcagcagacaagcacaggttgagaatggctgtgag
gaggaggaagaggaggaagaatatccacaggaagagcaaatggatgcagaggaatcagag
accaggaaaccacgtttgaatccattcaaaaaaggaggaaaatcacctgaaaggccctct
cccaaaccggtgagcagagaacaacgtgtgaaccctttcaaggtgtccggtgcaggaaag
tccttaagttctccagctggtcagcccagaacgactaatgttttggacagcatgacgatg
tccagcagaaaacctgcaactctcagcggaacatcaaaacagggcaaaggaccagtcctg
aagcccctggcacccaaacccaagtccaagacccaggccacgctactgcagatgagtgcc
tctaaaggaaacagtaagaaacaggaagacagccaaacaggagcagagaaagtgaaacca
gctcctgcagctacacctccagtatcagcggaaaatattgaaaacagaaaaccaaaaact
ggctttcaactgtggcttgaggagaataggaagagcattctcgcagacaatcctgacttt
gaggaaatggatgttatcaaggaaggcatggggcgtttccgcactctctcagcagaggaa
agactgaactggacggagagagcaaagggcgactcggaccccaagaaaagaaaacgtgaa
gatgaagcaggacaagttgatgaacatatggagtcagatgagggcagtgccaaaaagaaa
aagccactggatacttctgctaaacttgctgcatttgcatttaacaaagaatag
DBGET
integrated database retrieval system
