Ctenopharyngodon idella (grass carp): 127498879
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Entry
127498879 CDS
T08802
Name
(RefSeq) tubby-related protein 4 isoform X1
KO
K24720
tubby-related protein 4
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cide04990
]
127498879
Domain-containing proteins not elsewhere classified [BR:
cide04990
]
Other domain-containing proteins
Tubby family proteins
127498879
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
127498879
NCBI-ProteinID:
XP_051724736
LinkDB
All DBs
Position
17:2446535..2461213
Genome browser
AA seq
1897 aa
AA seq
DB search
MSRDYEEPGQSVGMLAAVEHGPVLCSDSNILCLSWKGRVPKSEKEKPVCRRRYYEEGWLA
TGNARGVVGVTFTSSHCRRDRNTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDMEGGIF
VWIQYEGRWSVELVNDRGAQVSDFTWSHDGTQALIAYRDGFVLVGSVSGQRHWSSEINLE
SQITCGIWTPDDQQVLFGTADGQVIVMDCHGRMLAHVLLHESDGIVSMSWNCPNFLVEDS
TESDTDSDDSTPAQVQNLKPLLTVSFISGDISLMNNYDDLSPNIIRSGLKDVEVQWCSQG
DLLAVAGMERHGLPADSACASLMRNALVKFYNVQGEHIYTLETPAQRPITTICWGHRDSR
LFLACGPALYVVRVEHRVASLQLLCQQGIASALKEERDVGKLNMPSLLCSYVTTAFIPTI
KPPIPDPNNIRDFVSYPTAGNERLHCTMKRSEENPEAGGPCYTLYLEHLGGLVPILKGRR
ISKLRPEFVIMDPKMDGKADEVCVNGMISYMTDSCNCSDSSDIELSDEWVGRKSPKLSRG
NRSPKLPRYSKHIRINMESRKSPKLAQTSQEMSRSPRLPKKAAVRSPSLTRREFSVDGFS
EHNYLAQVTSNIWGTKFKIVGLASFLPANLGAVIYKTSLLHLQPRQMTIYLPEVRKISLD
FMSLPVFNPNVFSEDEDDLPVMGPSGVSADNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQ
SLLANQNIQLDVLTNPTATAAAAAAAAAATAAAANATVSEHSQDTVTAQYTVPTRYSNPG
QVIFSGLEMSNILSGTLPPPPHHLPQQPHQQRQQQQQQQDHQQSKHQQQLQPQQHHLKLQ
HQSQQLHQQSLQQQHIQHQQQLQTQQHQQQLQQQHQQQLQQQHQQQLQQQHQQQLQQQHQ
QQLQQQHQQQLQQQHQQQLQQQHQQLQQQHQQQLQQHQQQLHQQQMQQQQLQQQQQQIQQ
QVQQHQQQIHQQHQQQIHQQHQQQFQQQQHQLQLQHEQMQQQQQQMQQQQQQIRQQIQEM
RQQQQQLQQQHQQIQLQHQQMQRQHQQMQQQLKMQMTLQPPPSGYATLSIHQLQLMPQIP
HPDQPPDRGEQVLPLKVPSRPQSFIETDTLEVQMRKVNPPPPYPGTVVSAAAAAPTTAPP
GLLVSNENGTTLTTDPCLTKDEFSLHPIGLQYPTPLGYERITTFDSSGNVEEVCRPRRRL
LRNQNAYGIQGMGSSATLKVTSSENKKVQLPYSSATLSRLSVPRYSIPSGDPPPYPDTSN
QMNTIRSPTQRIDSSLIHATLRRDRRELTLKVSQMVDTVRTLPTKSKMNGSLTLSYQPRI
PTALYTCTQCSSNSSSTSVSVTGGGTNSSGIAGGTVVRQDFPPGKGAQHSTIIVHSKSAS
PLASQSSYNLLSPIDNSRDRTVYVNSAFTEDETLSQQCHLEKSVRHLTLGDVNLTVKRPP
PYQWDSPAAEQLWIPQEQNLLPGPPGPPHKPPPFILGQTQHLDMTRLPFVLSTKPPPSPS
SMTLPSAYQLSLSPFPPVVGHGGPQLQPLQSPAQPCGPNDIVTSSPFSQPDPTLVLPPGY
PTNLTNLGCCTLPPMYPGTSSCNNLQLHPMSLHPWSTYSTCPPMPDHSSTLPSKTHQALE
KPVLSPPPPPPPPPPPPPPPPLPPPPPPVEHLNHQSTSEVVAESGDSFQDQSSLNESPQG
AERFSKKGRKRLDSRAEEANMSGVSEGKSKKESRTLSDFNSLISSPRLGSREKKKPKGQK
EPLNKAKKLSRTSNEFQDSSESEPELFISGDELMNQSQSSKKGWKSKRNLRTANELEEIK
CRKANEREDRSLGSQGFVYVMANKQPLWNEATQVYQLDFGGRVTQESAKNFQIELDGRQV
MQFGRIDGNAYILDFQYPFSAVQAFAVALANVTQRLK
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atgtccagggactatgaagagcctggtcagtctgtagggatgttggctgcggtggaacat
ggtccggtcctctgcagtgactccaacatcctctgcctctcatggaaagggcgagttccc
aagagtgagaaggagaagccggtgtgcaggaggcgctactatgaggagggctggcttgcc
actggaaacgccaggggtgttgtgggcgtgacattcacgtctagtcactgcagaagggac
agaaataccccacaaagaatcaacttcaatttacggggtcataacagtgaggttgtcctt
gttaggtggaatgaaccatttcagaagcttgcaacgtgtgacatggagggagggatattt
gtgtggatccagtatgaaggaagatggtctgtagagctggtgaatgacagaggtgctcag
gtgagtgacttcacttggtcacatgatggtacacaggccttgatcgcctacagggatggt
tttgtcctggtgggctcagtcagcggtcagagacactggtcatctgagatcaatttggag
agccagatcacctgtggaatctggacccctgatgaccagcaggtgctttttggaacagca
gacgggcaagtcatagttatggactgccacggccgtatgcttgcccatgttctgctgcat
gagtcagatggcatagtcagcatgtcctggaactgcccgaacttcctggtggaggacagc
actgagagcgacacagactctgatgactctactccagctcaagtgcaaaatctcaaacca
ctgctaacggtcagcttcatatcgggagacattagtttgatgaacaactatgatgacctc
tcacctaacattatacgctcaggactgaaagatgtggaggtacagtggtgctctcaggga
gacctgctggcagtggccgggatggagagacacggcctacctgctgactcagcctgtgcc
tccttaatgaggaatgcccttgtcaagttttacaatgtccagggggaacatatatacact
ttagaaactccagcccaaaggcccattaccactatttgctggggtcacagggactcccgg
ctgtttctggcgtgtggaccagccctgtatgtagtgcgtgtggagcaccgtgtggccagc
ctgcagcttctgtgtcagcagggcattgccagtgctcttaaagaggagcgagatgtgggg
aaactgaacatgccttcactcctctgttcctacgttaccactgcattcattccaactatc
aagccccccatccctgatccgaacaacattagagactttgtgagctatcccacagcaggg
aatgaacggctgcactgcactatgaaacgttcagaggagaacccagaggcaggaggcccc
tgttacaccctctatctggaacacctgggaggtctggtgcctattctcaagggccgtcgc
attagcaaactgcgaccagagtttgtcattatggacccaaaaatggatggtaaagcagat
gaggtctgtgtaaatggcatgatctcctatatgactgacagctgtaattgctcagactca
agcgatattgagttgagtgatgagtgggttgggcgaaagtcgccaaaactttccagagga
aacaggtctcctaagcttcctaggtactctaaacatataagaattaatatggaatcaaga
aagtctcccaaacttgcccaaacatctcaagaaatgtctaggtctcctagattaccaaag
aaggctgcagttcggtctccaagtcttactcgaagggaattttcagttgatggctttagt
gagcataattacttagcccaggtcacctctaacatctggggaacaaagtttaagattgtg
ggcctagcttcctttttgccagctaacttaggagcagttatttataaaactagtttgctg
cacctgcaacctcgtcagatgaccatctatttgcctgaggtgcgtaaaatttccttggac
ttcatgagcctcccagtcttcaatcccaatgtgttcagtgaagatgaagatgatttacct
gtgatgggaccttctggagtgtcagccgacaatcctccttgcacagttaatattcccatt
gctccaattcacagccctgcgcaagccatgtcacctacacagagtataggccttgtccag
tctctcctagccaatcagaatattcagcttgatgtcctcaccaatcccacagctactgca
gcagcggcagctgcagcggcagccgcaacagctgcagcagctaatgcaacagtgtcagag
catagtcaggacactgtgaccgcacagtacactgtgccaaccagatactctaaccctgga
caggtgatattcagcggactggaaatgagtaacatcctgagtggaactcttcctcctcct
ccacatcatctgccacaacaaccccaccaacaacgtcagcaacaacagcaacaacaagac
catcaacaatcaaagcatcaacagcaattacaaccacagcagcatcatctgaaattgcaa
catcagtcacaacaactgcatcaacagtcgctgcagcagcaacatatccagcatcagcag
caattgcaaacacagcagcatcaacaacagcttcaacagcaacatcaacaacaacttcaa
cagcagcatcaacaacaacttcaacagcagcatcaacaacaactgcaacagcagcatcaa
caacaactgcaacagcagcatcaacaacaactgcaacagcagcatcaacaacagctgcaa
cagcaacatcaacaactacaacagcaacatcaacagcagttgcaacaacatcagcagcaa
ttgcatcagcagcaaatgcaacaacagcaactgcaacagcagcagcaacaaattcagcag
caagtgcagcagcatcaacaacaaattcatcaacagcatcaacaacaaatccatcaacag
catcaacaacaattccaacagcagcagcaccagttgcagctgcagcatgagcaaatgcag
caacagcaacaacagatgcaacaacagcagcaacaaattcgacagcaaattcaggagatg
aggcagcagcagcaacagcttcaacaacaacatcaacaaatacagctgcagcatcaacaa
atgcaaagacagcatcagcaaatgcaacagcaactcaaaatgcaaatgacactccagcct
ccaccttcagggtatgctactctgtccatccatcaattacagctgatgcctcaaattcct
catccagaccagccaccagatagaggagaacaagtgcttcctctgaaggttccctcacga
ccacagtcatttattgaaactgacactcttgaggtccagatgcgcaaggtaaaccctcca
ccaccttacccaggtacagtggtatctgctgcagccgccgcacccactacggcacctcca
ggtcttcttgttagtaatgagaatggcactacgctgacaacagatccatgtttaactaag
gacgaattctctcttcatccaattgggctccagtatccaactccattaggctatgaaaga
atcaccacgtttgacagcagcggaaatgtcgaagaggtgtgtcgcccaaggagacgcctg
ttaaggaaccaaaatgcctatgggattcaaggaatgggtagctccgccacgttgaaagta
acttcatctgagaacaagaaagtccagttgccatacagctcagcaactctgagtcgcctc
tcagtgcctagatattctataccaagcggagacccaccaccatatccagacacatcaaac
cagatgaacacaatcagaagtcctacacagaggattgacagcagtttgattcatgccact
ttgcgtcgggatagaagggaactgaccctgaaggtttctcaaatggtggacacagtgagg
actctaccaacaaaatccaaaatgaatggttctcttacgctctcctatcagccaaggata
cccacagctttgtatacttgcactcagtgtagcagtaacagcagcagcactagtgtaagt
gtcaccggtggtggcaccaacagcagtggaattgctggaggaactgtggtgaggcaagac
ttcccacctggcaaaggggcccaacacagcactataattgtgcactccaaaagtgcttca
ccattagcttcccagtcctcctataacctcctaagtcccattgacaacagtagagacaga
actgtctatgtgaactctgcctttacggaagacgagacacttagtcagcagtgccatctt
gaaaagtcagtacggcatttaacactaggagatgtcaatttaacagtcaaacgacctcca
ccttaccaatgggactctcctgcagcagaacaactctggatacctcaagagcaaaatttg
ttgcctggacctccaggaccacctcataagccaccaccatttatacttggccaaacacag
cacttagacatgacccggctaccttttgtcctttcaacaaagcctccccctagtcccagt
tctatgaccctcccttcagcttatcagttatccctttcacccttcccaccggtggtaggt
catggtggacctcaactacagcctttgcagagtcctgcacaaccatgtggccccaatgac
attgtaacatctagccctttcagccaaccagacccaacgttagtcctacccccaggttat
cccactaatttgaccaatctaggttgttgcactctgccacctatgtacccagggacaagc
tcctgtaacaaccttcagctgcatccaatgagcttgcatccttggagcacatatagcact
tgccctcccatgccagaccattcttccacactgcctagtaagacccatcaggccctggag
aagccggttctctctccacctccaccacctccacctcccccaccacctcctcctccacct
cctctccctccccctccaccacctgttgaacacctgaatcatcagagcacctctgaggtg
gtcgcagaatctggggatagctttcaggatcagtcctctctcaatgagagtccacaagga
gcagagaggttcagcaaaaaggggcgtaagaggcttgacagtagggcagaagaggccaac
atgtctggagtctctgaagggaaatctaaaaaagaaagtcgcacactctctgacttcaat
tccctgatctctagcccaagacttggcagcagggaaaagaagaagcctaaaggacagaaa
gagccattgaacaaggccaagaaactgagtaggacctccaatgagttccaggacagctca
gaaagtgagcctgagctctttattagtggtgatgagttgatgaaccaaagccagagcagc
aagaaaggatggaagagcaaacgcaatctgcgtacggcaaacgaacttgaggaaatcaag
tgccgcaaagctaatgagagagaggatcgtagtcttggcagccaaggctttgtttatgtc
atggccaacaagcagccattgtggaatgaagccacccaggtttaccaacttgactttgga
ggacgggtgacacaagagtcagccaaaaactttcagattgagcttgacggacgccaggta
atgcagtttggcagaatcgatggcaatgcatacatcctggattttcagtatccattctct
gcggtacaggcatttgctgtggccttggccaatgtcactcagagacttaaatag
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integrated database retrieval system
