Ctenopharyngodon idella (grass carp): 127498978
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Entry
127498978 CDS
T08802
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127498978
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cide01002
]
127498978
Enzymes [BR:
cide01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
127498978
Peptidases and inhibitors [BR:
cide01002
]
Cysteine peptidases
Family C2: calpain family
127498978
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
CAPN13-like_C_EFh
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
127498978
NCBI-ProteinID:
XP_051724968
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All DBs
Position
17:15230312..15254251
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AA seq
764 aa
AA seq
DB search
MPGIFGLQDLSCGGKSQCFQSLKKTLSQRVKMPYTPSGFFCDRLIRERERRDGEGSLSKP
LRFSDQDYNTLKQEYLQKKTLFEDETFPATVDSLGYKELGHKSNKVKNIIWKRPKEICEN
PQFIVGGASRTDICQGDLGDCWLLAAIACLTLNDKLLYRVIPQDQSFSEGYAGIFHFQFW
RYGDWVDVVVDDRIPTFNNQLVFTKSAERNEFWSALLEKAYAKLHGSYEALKGGNTAEGM
EDFTGGVTEFYEMKEAPKELYKIMKKALERGSLMGCSIDSLVPARFETRTTTGLVKGHAY
SVTAVEECKQSQQKESKVRLVRLRNPWGQVEWNGPWSDNSKEWETISKTEKEKLQHQNAE
DGEFWMSFEDFKKNYTKIEICNLTPDALEDDKLHKWTVSVNEGRWVRGCSAGGCRNYPDT
FWTNPQYRLRLLEEDDDPEDNEVACTFVVALMQKNRRRERKLGANLFTIGFSIYEVPKEM
HGNKQHMQKEFFMSNSSKARSRAYINLREVTQRFRLSPGEYVIIPSTYEPHQEGDFILRV
FSEKRNTSEEIENRIEADHPVPAPASTGEESEEDQQFLSIFQQIAGDVSTGEPLSAGGSQ
MEISANELKDVLNKVVSKYKDIHTEGFSRESCRSMIALMDMDGTGRLNLQEFRHLWNKIK
HWQEIFKRYDFDHIGTISSYEMRNAINDAVTCFVSHSGFRLNNQLYDIVIIRYANENMNV
DFDSFVSCLVRLEGMFRAFHAFDQCGDGTIRLNVLEWLQLTMYA
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgccagggatttttggcttgcaagacttaagttgtggtggcaaaagccagtgttttcaa
tccctaaaaaaaacactgtcccagagagtcaagatgccctatacgccgtctggtttcttt
tgcgaccggttaatccgggagagagagagaagggatggtgaagggtccctgagcaaaccc
ctccgtttcagcgaccaggactacaacaccctcaagcaggagtatctccagaaaaagacc
ctttttgaggatgaaaccttccctgccactgtggactcccttggctacaaagagctgggc
cacaagtctaacaaagtcaagaacatcatctggaagcgtcccaaggagatatgtgaaaac
ccacagttcattgtcggaggcgctagcaggacagatatctgccagggagacctgggagac
tgctggttgcttgctgccattgcgtgtctgactctaaacgacaagctgctatatcgagtt
atacctcaagatcagagcttctctgaaggctatgccggaattttccatttccagttctgg
cgttatggtgactgggtggatgttgttgttgatgaccgcattcccaccttcaacaaccag
ctggtgttcaccaagtcagctgaaaggaatgaattctggagtgctcttctggaaaaagct
tatgctaagcttcatggttcctatgaggctcttaagggtggaaacactgcagagggaatg
gaggacttcaccggtggagtgactgaattctatgagatgaaggaggcacctaaagagctg
tataagatcatgaagaaagctctggagagaggctccctcatgggctgctccattgattcc
ctggttccagcccgctttgaaactcgtaccacaacaggtcttgtgaagggtcatgcctac
tctgttactgctgtagaggagtgtaaacagtctcagcagaaggagtctaaagtgcgtctg
gtgcgtctgcgtaacccctggggtcaggttgaatggaacggaccttggagtgataattca
aaagagtgggaaaccatctcaaaaactgaaaaagagaaactccagcatcagaatgctgaa
gatggagaattctggatgtcatttgaggattttaagaaaaattacactaaaatagagatt
tgcaacctgacccctgatgctctggaggatgacaagttacacaaatggacggtgtctgtt
aatgagggacgctgggtaagaggatgctctgctggaggatgcaggaattatccagacaca
ttctggacaaatccacaataccgcctgcgtctcctggaggaagatgatgacccggaggat
aatgaagtagcttgcacttttgttgttgctctaatgcagaaaaacagacgtagagaacgc
aagttgggtgcaaatctcttcactatcggattttccatctatgaggtgccaaaggagatg
catggaaacaagcagcacatgcagaaggagttcttcatgtctaactcctctaaagcccgt
tccagagcttacattaacctgcgagaggtgacccagcgtttccgtctgagtcctggggag
tatgtcatcattccctccacctacgagccccaccaggaaggcgacttcatcctccgtgtc
ttctctgaaaagagaaatacctctgaggagatagagaacaggattgaagctgatcatcca
gtgccggctccagcttcaactggggaagagagtgaggaggatcagcagttcctgtccatt
ttccagcagatcgcgggggacgtgagtactggggagccactgagcgctggggggagtcaa
atggagatctcagccaatgaactcaaagatgtcttgaacaaggtggtgtctaaatacaag
gacatacacactgaaggcttcagtcgagagagctgtagaagcatgatcgccctcatggat
atggatggaaccggaagacttaacctgcaagagtttagacacttgtggaacaaaatcaaa
cattggcaggaaatctttaagcgctatgactttgatcatattggcactatcagcagctat
gagatgagaaacgccatcaatgatgcagtcacgtgttttgtgtcccactcagggttccgt
ctgaataaccagctgtatgacatcgtcatcatacgctatgccaatgaaaacatgaacgtc
gactttgacagttttgttagctgtcttgtgcgactggaggggatgttcagagcattccat
gcctttgatcaatgtggagatggcactatcagacttaatgtactggagtggctccagcta
accatgtatgcctag
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