Ctenopharyngodon idella (grass carp): 127499216
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Entry
127499216 CDS
T08802
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03013
Nucleocytoplasmic transport
cide03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127499216
03015 mRNA surveillance pathway
127499216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127499216
03041 Spliceosome [BR:
cide03041
]
127499216
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127499216
Spliceosome [BR:
cide03041
]
Complex C
Other components
EJC/TREX
127499216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
127499216
NCBI-ProteinID:
XP_051725380
LinkDB
All DBs
Position
17:complement(29245293..29253038)
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AA seq
662 aa
AA seq
DB search
MAVAVRSLQDQLEKAKESLKSVDENIRKLTGRDPSELRPGQTRRLSITGPGGGRGRGINL
LRRGLSDSGVGPPAKQRDIEGALLRLAGDQRARRDSRHDSDAEDDDDVKKPALQSSVVAT
SKERTRRDLIQDQTMDERGKQRNRRMFGLLMGTLQKFKQESTVSTERLKRRQEIEQKLEV
QAEQERKKVESERRELFEERRAKQTELRLLEHKVELAQLQEEWNAHNTKLIKFIRTKTKP
PIFYLPGRMCSATQKLLEESQKKLNGVFDERREAFAEQLNKMEARPRRQSQRTGDREMED
SRRAEETKKEDQEEGKAGVGRTGNRHDVEIEDEEEDVVEEEGEESSEIREREGEQEQAEE
NDKHESERKAEEDEEEDEEEDVGAVKEDEEEQMEVTEVVREVEAESKLQVESPEAIVEEV
GNVKREEEQETENETQQDVVTDSQHTPESQMETQPEECKEPKLDIPTPGVTEHDTKQDDA
APETQQPQLEPDPEVPSQEQSQEPSVQLQGAKADTKEAGEEADDARGRTKVREKRSKSRS
SSSSSSSSSSSSSSSGSSSSSSGSSSSSSGSSSSSSSSRSRSRGRDRDGRDHKRRRRPSD
RERRKSGSERGHKSSKGSGRESKGSKDKNSKPDRKRSPEGSRSGRRSSRSERDRKSDRKE
RR
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgtgcgaagtttgcaagaccagcttgaaaaagccaaggaaagcttaaag
agcgtagacgaaaatattcggaaattaaccggcagagatccgagtgaattaagaccgggt
caaactaggagactgtccatcacaggcccaggtggaggtagggggcgtggaatcaatttg
ctgaggcgtggactctcagatagcggtgtaggacccccagccaaacagagagacatcgaa
ggggcactcttgaggctggcaggggatcagcgagccaggagagattcacgccatgacagc
gacgctgaggatgatgacgatgtcaaaaaaccagcgttgcagtcatctgtggttgctacc
tccaaagaacgtacgcgccgagatcttattcaagatcagaccatggacgagagaggaaag
cagagaaaccggcgcatgtttggcctattgatgggaacattgcagaagtttaaacaggag
tctactgtgtccacagagcggttaaaaagacggcaagaaattgagcagaaattggaagtg
caggcagaacaggagcgtaaaaaagttgagagtgaaaggagagagctctttgaagagaga
cgtgccaaacaaaccgagctgcgacttctggagcacaaagtggagctcgctcaactgcaa
gaggagtggaatgcacacaatacaaagctcatcaagttcattcgcacgaagaccaagccc
ccaatcttctacctgcctgggcgaatgtgctccgctactcaaaagctcctggaggagtct
cagaaaaaattaaatggtgtttttgatgaaagacgcgaagcctttgctgagcaactcaac
aaaatggaggctcggccaaggcgtcagtcccagaggacaggtgacagagaaatggaggat
agccgtcgggctgaagagacgaagaaagaagatcaagaggagggtaaggctggagtaggg
cggacaggtaacaggcatgatgtggagattgaggatgaggaggaagatgtagtggaggag
gaaggagaggagagctcagagatcagggagagggagggggagcaggagcaggccgaggag
aacgataaacatgagagtgagaggaaggcagaggaagatgaggaggaggacgaggaggag
gatgtgggagcagttaaggaagacgaggaagagcagatggaggtcacggaagttgtgagg
gaggttgaggcggagagtaagttgcaggttgagagtccagaagccatagttgaggaggta
ggtaatgtgaaaagggaggaagagcaggagaccgagaatgagactcagcaggacgtcgta
acggactctcagcatacccccgaaagccagatggaaacacagcctgaggagtgtaaagag
cctaaactggacatcccaacccctggtgtgacagaacatgacaccaaacaagatgacgct
gcgcctgagacccaacagccacagcttgaacctgacccagaagtcccctctcaagagcag
agccaagaaccgtcagtccaactgcaaggagccaaagcggacacaaaggaagctggcgag
gaggccgatgacgctcgcggacgcaccaaagtccgggaaaagaggagcaagagccgaagt
agcagcagctcctcttccagttcctcttcaagctcatcatccagtggatccagctcctct
tctagtggctccagcagcagttcctctggttcctcctcgtcgtcttccagttcacgctcc
cgcagccgtggcagggatagagacggccgagaccacaaacgccgtcggagaccgtcggac
agggagcgtaggaagagcggcagcgagaggggacacaagtcctccaaaggcagcggacgg
gaaagcaaggggtccaaagacaagaactccaaacctgacaggaagaggagtccggaagga
agcaggtcagggagaaggtcctccagaagcgagagagatcggaagtctgatcgaaaggaa
cgacgttga
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integrated database retrieval system
