Ctenopharyngodon idella (grass carp): 127499295
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Entry
127499295 CDS
T08802
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04517
IgSF CAM signaling
cide04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
127499295
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127499295
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cide04812
]
127499295
Cytoskeleton proteins [BR:
cide04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
127499295
Intermediate filaments
Intermediate filament-binding proteins
127499295
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH
PH_9
Helical_needle
TMP_3
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
127499295
NCBI-ProteinID:
XP_051725414
LinkDB
All DBs
Position
18
Genome browser
AA seq
2616 aa
AA seq
DB search
MANASTDLDNAEAQRQLNNNNRPASTGFWETETTSAKLFECSRIKALADERDAVQKKTFT
KWVNSHLARVSCRISDLYNDLRDGYMLIRLLEVLSGEMLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIETEDNRETRSAKDALLL
WCQMKTAGYPEVNIHNFTTCWRDGLAFNALIHRHRPDLIEFHKLTRSNATHNLQQAFNIA
EQSLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRIGKVLDNAIEAQ
KIIQRYEALASDLLEWIERTISIISNQKFANSLSGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPHDGKVISDINKAWERLEKAEHERGVALRKELIRQEKLE
LLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADILSYEERISVV
VELATEMESEGYYDIRRISARKENILGQWTLLKELVVGRKARLEKNLALQKTFQEMVYMI
DWMEEMQVKLLSKDYGKHLLEVEDMLQKQSLQEADISIQAERVQTLNTAALKFTTIEGYQ
PCDPQVICNRVNHVNTCLEELKQLAAKRRLELEDSRELWAFFQEVEESEAWIREKTSILA
TQSCGKDLSSVLRLLQKHKTLAGELLARRALLQQTMKKGKQILTQKSFGTAGIQERLMEA
KAEWKRLEDQAAQRLCNLQEALDFFQFSTETDDLLAWLQDTYRLVSSEDFGHDEYSTQSL
LKKHRGVRESIDKHRVQVVGLRKHMVALPLYYRELDEVRVRMSETEQLYTEVAEVAVLRQ
QWLHDALAVYRMFSEVNACEVWIDEKEQWLNQIEVPERLEDVEVIAHRFESLDQEMNSLM
GRILDVNQIVQQLLDSGHPSSTEVRGCQDHLNSRWNRIVELVEQKKDHLDSILRIQNYLL
ECTEIKSQIQDKRKAIDATQYVGSDLGSVLALQRRLSTMEGALAVLEPKLLRLQEDAEEL
ATSHPDKAVDILVPFEGISVEWEELKRTLQGCEDSLTVAGRLQQFIQDLDSFLTWLVQTQ
TAAASDELPNALEDAERLINQHAALKEEIGRYEEDYERLQAVNELLESEEAPLPHGALQQ
WLHKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAEAFLNNQESALAHVELPTTVE
TVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQNNIYSERIRERVDLLANRGNQNRD
HAKQWLHKLNDQWELQRFLQDCHEIGDWVAEKMLMARDTSRDETQKLHKKWLKHQTFMAE
LAQNKEWLDKIENEGQRLMQEKPELSALVKKKLEEIRECWQDLESTTQAKARQLFEANRA
DLLVQSYSSLDQRLEQLEGQLAHVDYGQDLTTVNKQLKKLQTMECHMEQWYKEVGDLQAQ
AASIPQQGEVMEKVSEKQVGVETRIVRLIEPLKERRRILLASKEVHQVGRDLEDEILWIQ
ERLPMATSQEHGTSLQAVQQLMKKNQSLQKELHGHRARVEDVLERAGVIASIRSPEADSI
RDGMEQLHHLWEVLWAETERRQLMLDAMYQAQQYYFDVGEVEAWLSEQELHMMNEETGKD
EASTLQLLKKQLALEQTIEDYAETIGLLSQQCRQLLELGHPDCEQISKRQSQIDRLYVSL
KDLVEERKSRLEQQYWLFQLNREVDELEQWIAEREVIASSTELGQDFEHVTILQEKFTEF
AAETGSLGQERVTAVNQMVDELIDYGHADAATIAEWKDGVNEAWADLLELMETRGQMLAA
SHQLHKFFSDCREVFAQIEDKQRRLPEVRACQGGTSNTSTLQRLMQTFEHDIQLLVTQVR
QLQESAAQLRTVYAGEKAEAIAMQEHEVMQAWKELLISCEDCRMQITTATDKLRFFGMVR
DQLMWMDSIICQIGTGEKPSSFLRALMGYGLSGACRDVSSVEVLMNYHQSLKSEVEARNK
SVLQCIEMGKTLLAARNPASEEIKEKLEKVLAKQQELTEKWDRHWEELQQMLEVHQFAQE
AVVAEAWLTAQEPFISSNELGGSVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKI
KAEQSKLPPTPLLGRKVFLDPQDSSPARSSPSSIIRQTIYEQGEARLERITPQPSPSSVA
RRLGSTVANYTPIMNGAATYRLQEARNAGIVGVAAGLGTAMEHKVTQLRAEFKAQTSHQK
IEHIHEVVHPLLERERERYHENVMAEVVLQEPGGGRERLNSVVGGSGSSRSELLVEQHPP
PRESRLERQLSTEQLIQARRDELPQEVWRERAERAERRLERQTSSEQEGHEVRRRDRHRL
ERQESSEHEAREQSDRRSGGGEKRSTLAEIVEQLQEREAAQARGEIPRLPNGLPEKSSRP
DRPRARDRPKPRRRPRPKETTAGETRRSRSAPAQSSPPVPLPPTHTAQHEGFLFRKIDID
GQKKSSNSRSWVNLYCVLNKGELGFYKDAKNTATPYNNEPLINLSRCACDINNGYKKKKN
VFTLKTKDGSEFLFHAKDEEDLKIWITSITASISEHEEIAKRGQTHPTTSSTDEGTRRDG
SRAGGSERGEKSDRADGGSVRSDKGEKPEKKTGKKK
NT seq
7851 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcctcaacagacctggacaatgctgaggcccagagacagctcaacaacaac
aacaggcctgcaagcacaggattctgggaaacagagaccaccagtgccaaactatttgag
tgctcccgcatcaaagcactagccgatgagagggacgcagtacagaagaagacctttact
aagtgggtgaactctcacttggcccgtgtgtcctgtcgtatctctgacttgtataatgac
ctgagagacggctacatgctcatcagactgctggaggtgctgtcaggagagatgctgcct
cggcccacgagaggcaggatgaggattcactgtttggagaatgtggataaggctcttcag
ttcctcaaagaacagagggttcatctagaaaatgttggttctcatgatatagttgatgga
aaccaccgtctcactctcggcctcatctggaccatcatccttcgcttccagattcaggtg
attaagattgagaccgaggacaacagagagacacgctcagctaaagatgccctacttctg
tggtgtcagatgaaaacagcagggtaccctgaggtcaacattcacaacttcaccacctgc
tggagggacggcctggctttcaacgctcttattcacaggcacagacctgatttaattgaa
tttcacaagttgaccagatcaaatgcaacacacaacctccagcaagcctttaacatagct
gaacagagtcttggactcaccaaactactagaccctgaggatgtaaacacagagaatcca
gatgagaagtccatcatcacttatgtagtctcctactatcattacttctccaaaatgaag
gcacttattgtggaagggaagagaattggaaaggtgctggacaatgccatagaagctcag
aagataattcagcgctacgaggctttagcgtccgacctgttagagtggattgagagaacc
ataagcatcattagcaaccagaagtttgcaaactcgctatcgggtgttcagcaacagctt
caagcctttaccacctactgcaccattgagaagcctatcaaattccaggagaaagggaac
ctggaggtgctgcttttcaccatccaaagtaagctcagagctaacaatcagaagccatat
gtgcctcatgacgggaaagttatctcagacatcaataaggcgtgggagagactagagaag
gcggagcacgagaggggcgtggctcttagaaaagagctgattcgtcaggaaaagctagaa
cttcttgctcaacggttcgatcataaaaccaccatgaggcaagcttggctaaacgaaaac
cagcgtctcgtctcacaggataacttcggctatgacctgccagcggtagaagctgccatg
aagaaacacgaggcgatcgaagcagacatcttgtcatacgaggagcgcatcagtgtcgtg
gtggagctggcgacggagatggagtcagaaggatattatgacatccgtcgcatctcggca
cgcaaagaaaacatcctcggccagtggactcttctgaaggagctggtggtgggacgtaaa
gcccgtctggagaagaacctcgccctgcagaagaccttccaagagatggtctacatgatc
gattggatggaggagatgcaagtgaagcttctatctaaggactacggtaaacatcttctt
gaggtggaggacatgctccagaaacaaagtttacaggaggccgacatctctatacaggca
gagagagttcaaaccctcaacactgcagctctcaaattcactaccattgaaggttaccag
ccgtgtgaccctcaggtaatttgtaaccgggtcaaccacgtcaacacctgcctagaagaa
ttaaagcagctggctgcaaagcgccgcttggagctggaggattcacgtgagctatgggcc
tttttccaggaggtggaggaatcggaggcttggatccgggagaaaacatccatcttggcc
acgcagagctgcggaaaagacctgagcagcgtcctgcgactgctacaaaagcacaaaact
ttagctggagagctgttggcgcggcgtgcgctacttcagcagaccatgaagaagggcaag
cagatcctcacccagaagagctttggtacggcaggaatacaagagagactaatggaggcc
aaggctgagtggaagagactggaggaccaggccgcacagaggctgtgtaacctacaagag
gcgctggacttttttcagttcagcacagagacggacgatctactagcttggttacaggac
acttaccgccttgtttctagcgaggacttcggacatgatgagtactctacgcaatctctt
cttaaaaagcacagaggtgtccgagagagtatcgataaacaccgtgtacaagtggtgggc
cttcggaaacacatggttgcgttgccgttgtattatcgggagctggatgaggtgcgagta
cgcatgtcagagacggagcagctctacacagaggtggcggaagttgccgtgttgcggcag
cagtggctgcatgacgcgctggctgtgtatcgcatgtttagtgaggtgaacgcctgtgag
gtgtggatcgatgagaaagagcagtggctgaaccaaatagaggttcctgagagactagag
gacgtggaggtgatcgcacacaggtttgagagcttggaccaggagatgaacagcctgatg
ggaaggatactagacgttaatcagatcgtccagcagcttttagacagcggtcaccccagt
tccactgaagtcagaggctgtcaagatcacttaaacagcaggtggaaccgcatcgtcgag
ctggtcgagcagaagaaagatcacctggactcgatcctgcgcatccagaactacttgctg
gaatgcacggaaatcaagtcccagattcaggacaaacggaaagccatagatgctacgcag
tatgtgggcagtgacctgggcagcgttctggccctgcagcgccgtctctccaccatggag
ggagctctggcggttcttgagcccaagctccttcgccttcaagaggatgcggaagagctt
gccacatcccatccggacaaggccgtggacatcctggttcccttcgagggcatcagtgtg
gagtgggaggaactaaagcgcacgttgcaaggctgcgaggactctttaaccgtcgctggc
cggttgcaacaattcatccaggacttagattcctttctcacctggttggtgcagactcag
acagctgctgcttccgatgagcttcccaatgctttagaggatgcagaacggctaattaac
caacacgccgcgctgaaggaggagatcggaaggtatgaagaggactacgagcgtctgcag
gctgtgaatgagctcttggagtccgaggaagcgccgctgcctcatggagctctgcagcag
tggctgcacaagctggatgtgggctggaacaagctgctggagatgtgggagagcaggagg
gaggtgctggtacaagctcacatcttccatctcttcctgagggacgtcaagcaggctgag
gctttccttaataaccaggagtcagcgttggcccatgtggagctccccaccaccgtggag
accgtggaggcagccatcaaaaagcacaaggactttaccaccaccatggagctcaacctg
caccgcattaaagccgtcatagaggcaggagagagcctcatcagtcagaacaacatctat
tcagagcgcatcagagagagagtggatctactcgctaacagagggaaccagaaccgtgat
cacgctaagcagtggcttcataaactcaatgaccagtgggagctccagaggtttctacaa
gactgccatgagattggtgattgggtggcagaaaagatgctaatggcgcgcgacacctcc
cgcgacgagactcagaagcttcataaaaagtggctgaaacatcagaccttcatggcagaa
ctggctcagaacaaggagtggctggacaagatcgagaatgagggccagcggttaatgcag
gagaagccagagctgagcgcgctggtgaagaagaaactggaggagatccgtgagtgctgg
caggatctggagagcaccacccaagccaaagcccggcagctgtttgaggccaaccgggcc
gacctgctggtgcagagctactccagcctggaccaacgcctcgagcagcttgagggacag
ctggcacatgtggactacggccaggacctgaccactgtcaacaagcagctgaagaaacta
cagacgatggagtgtcatatggagcagtggtataaagaggttggagacctgcaggcacag
gcggcttccatccctcagcagggggaggtgatggaaaaggtgtccgagaaacaagtcggt
gtggaaacacgaattgtacgactgattgagcctctgaaggagagacgtcgtatcctgctg
gcctctaaagaagtgcaccaagttggccgtgaccttgaggatgaaattttgtggatacaa
gagcgtcttccaatggccacttctcaggaacatgggacaagtttacaagctgtacagcaa
ctcatgaagaagaatcaaagtctgcagaaagagcttcatggtcatcgtgcgcgtgtggag
gatgttctggagcgagcaggggtgatcgcgtccatccgcagtccagaggcagacagcatc
agggatggcatggagcagctccatcacctgtgggaggtgctgtgggccgagactgagcgc
cggcagctcatgctggatgccatgtaccaggcgcagcagtactactttgatgtgggagag
gtggaggcctggctcagcgagcaggaactgcacatgatgaacgaggagacgggaaaggat
gaagccagcactctgcagttgctgaagaaacagctggcgctggagcagactatagaggac
tatgctgagaccatcggactgctctctcagcagtgtagacagctgctggagctcggacat
cccgactgtgagcagatcagtaagcgtcagtctcagatcgacaggctgtacgtgtctctg
aaggacctggtggaggagaggaagtctcgtctggagcagcagtactggctctttcagctc
aacagggaagtggatgaactggagcagtggatagcagagagggaggtcatcgccagctcc
actgaactcggacaggactttgagcatgtcacgattctgcaggagaaattcacagaattt
gcagcggagacagggagcctggggcaggagagggtcacagctgtcaaccagatggttgat
gagctcatagattacggccacgcggatgcagccaccattgctgaatggaaggatggagtg
aacgaggcctgggcggatcttctggagctgatggagacgcgtggacagatgctcgctgct
tcacaccagttacacaagttcttctccgactgccgagaggtgtttgcacagattgaggat
aagcagcggaggttgcctgaggttcgtgcctgtcaaggaggcacttcaaacaccagcact
ctacagagactcatgcagacttttgaacatgatattcagctacttgttacacaggtaaga
cagttacaggagagtgcagcccagctccgaaccgtttatgccggcgagaaagcagaagcc
atcgccatgcaggagcacgaagtgatgcaggcgtggaaagagctgctcatatcctgtgag
gactgccgaatgcagatcaccacagcgactgacaagttacgtttctttgggatggtgcgt
gatcagctgatgtggatggacagcatcatctgtcagataggaactggggagaaaccaagc
tctttcctcagagctttaatgggatatgggctctctggtgcttgcagggatgtgtcatct
gtggaggtcctgatgaactatcaccagagcctcaagagtgaggtggaggcccgcaacaag
agtgtcctacagtgtatcgagatgggcaagactttactggccgcccgcaaccctgcatca
gaagagatcaaagaaaagctggagaaggttttggccaagcagcaagaactgactgagaaa
tgggacagacactgggaagagttgcagcaaatgttggaggtgcatcagtttgctcaggaa
gcggtagtagcagaggcctggctcactgctcaggaacctttcataagtagtaatgaacta
ggcggcagtgtggatgaggttgagcagctgattcgccgacacgaagccttccgcaaagct
gctgccacatgggaagagcgcttcagctctttacgtcgtcttaccacggtagagaagata
aaagcagagcagagtaagcttcccccaactcctttgttgggacggaaagttttcttggac
cctcaagactcttctcctgctcgcagtagcccttcctccatcataagacagaccatttat
gagcagggtgaggcccggttggagcgcatcacccctcagccctctccctcttctgtggcc
cgcagacttggttctactgtggccaactacactcccatcatgaatggagctgctacttat
cgccttcaggaagccaggaatgctgggattgttggtgtggctgcaggactgggcactgct
atggagcataaggtcacccaattgcgagctgaattcaaagctcaaacctcacatcagaag
atcgaacacatccatgaggtggtccaccccctactggagagagagagggagcggtatcat
gagaacgtgatggcagaggtggtgcttcaggagccgggcggaggaagggagcggctaaac
agcgtggtgggagggagcgggagcagtcgctctgagcttctcgtggagcagcatccccca
ccgagggagtcgcggttggagagacaactatctaccgagcagctgattcaagcacggagg
gacgagctgcctcaggaggtgtggagggaacgagctgagagggcagagaggaggctggag
aggcagacatctagtgaacaggagggtcatgaggtgcggcgtagggacagacatagactg
gaaagacaggagagcagtgagcatgaggccagggagcagtcggacagacgctctggtggc
ggggaaaaaaggtccacgctagctgagattgtggagcagcttcaggaaagagaggcagca
caggcccgaggagagattccacgtctacccaatggtcttcctgagaagtcttctcgacct
gaccggccacgggctcgcgacagacccaaaccgagaagaagaccacgacccaaggagaca
acagctggcgaaacgcgacgctcgaggtctgcgccagcccagagcagcccaccagtaccc
ctgccaccaacccacacggcccagcatgaaggattcctcttccgcaaaatagacattgat
ggccaaaagaagagttcaaacagcagatcttgggtgaacctgtactgtgtgctgaataaa
ggtgagctaggcttctataaggacgcgaagaacaccgccacaccttacaacaacgagccg
cttatcaacctgagccgctgtgcctgtgatatcaacaatggttacaaaaagaagaagaat
gtcttcacgcttaaaactaaggatggaagtgagtttctgttccatgctaaagatgaggag
gatctgaaaatctggatcacaagtataaccgccagtataagcgagcatgaagagattgcc
aaacgggggcagacccatccaactacctcatctactgacgagggaacgcgcagggatggc
agcagggcaggcggttcggaaagaggcgaaaagtcagaccgagccgacgggggatcggtg
cgttcagacaagggtgaaaagcctgagaaaaagacgggcaagaagaaatga
DBGET
integrated database retrieval system
