Ctenopharyngodon idella (grass carp): 127499347
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Entry
127499347 CDS
T08802
Symbol
zgc:173742
Name
(RefSeq) DNA topoisomerase I, mitochondrial
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cide03032
]
127499347 (zgc:173742)
Enzymes [BR:
cide01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
127499347 (zgc:173742)
DNA replication proteins [BR:
cide03032
]
Eukaryotic type
DNA Topoisomerases
127499347 (zgc:173742)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
DUF641
Motif
Other DBs
NCBI-GeneID:
127499347
NCBI-ProteinID:
XP_051725498
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Position
18:complement(25833302..25868946)
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AA seq
742 aa
AA seq
DB search
MAEDSCSVKEMETELKDNPCSSEDAFAVNPKKKKSKAKGKVKSQHEGKEKTHRKMKMPKV
ESMDFEDRRSKVNVKEEPDKDPDFVTEGKGKKRKRKVDKTDGRSSTSEAPLPKKKKKVAE
EGQGNSPTAKKKKIKEKKEKVKKEEGGCSVSTKKKKTKEEIVAARALKIKQKEEEEKQRW
RWWEEEKYEDGIKWKFLEHKGPYFPPEYQPLPDDVKFYYNGKAVKLSLPAEEVALFFAQM
LDHEYTTKEVFRNNFFRDWRKEMTLEERQLIMDLSKCDFVELHAMHKQKVEARKNMSKEE
KLVNKEVNQKIVDEYGFCVLDHHRERIGNFKIEPPGLFRGRGDHPKQGMLKKRIQPEDVI
INCSKDSRIPEPPAGHRWKEVRHDNTVTWLASWNENVQGSCKYVMLNANSKLKGEKDWEK
YEVARRLKSCVDAIRTQYQEDLKSKQMGTRQRAVALYFIDKLALRAGNEKEEGETADTVG
CCSLRVEHITLHDTLDGQKCVVEFDFLGKDCIRYYNKVPVAKRVYKNLKLFMENKQGGDD
LFDRLNTQVLNKHLTSLMPGLTAKVFRTYNASITLQQQLKELSNMKDNVAEKLLSYNRAN
RAVAILCNHQRAPPKTFEQSMANLQAKIDSRKEQLDLAKKELKQAKKEAKGSSDNKLLIV
VEKKKKAVQRCEEQLLKMEVQATDREENKQIALGTSKLNYLDPRITVAWCKNMEVPLDKI
YNKSLRDKFAWAVDMTEHDFVF
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagactcttgctctgtgaaagagatggaaacagagttgaaagataatccatgc
tcgagtgaagatgcttttgcagtaaacccaaagaaaaagaaatcaaaggccaaaggaaag
gtgaagtctcagcatgaagggaaggagaaaacgcataggaagatgaaaatgcctaaagtg
gagagcatggactttgaagacagaaggtctaaggtgaatgtgaaggaagagccagacaaa
gatccagactttgtaacagaagggaaagggaaaaagaggaaaagaaaagtggataaaacg
gatggtcgctcttctacctctgaagcacctttgccgaagaagaagaagaaagttgcagaa
gagggacagggaaactctccaacagcaaagaagaaaaaaattaaggaaaaaaaagaaaag
gtgaaaaaagaggaaggagggtgttctgtctccactaagaagaagaaaaccaaggaggag
attgtggcagccagggctctcaagataaagcagaaagaggaggaagagaaacaaagatgg
agatggtgggaagaagagaagtatgaggatggaattaaatggaagtttctagaacacaaa
gggccatatttcccccctgagtatcaacccctaccagatgatgtgaagttttactataat
ggaaaagcagtgaaactcagtctgccagctgaggaagtggcacttttctttgctcaaatg
ttggatcacgaatacacaacaaaagaggtcttccgcaataacttcttcagggactggagg
aaggagatgactttggaagagagacagctaatcatggatctaagcaagtgtgattttgtg
gagctccatgctatgcacaaacaaaaggtggaagccagaaagaatatgagcaaagaggag
aagttggttaataaagaggtcaatcaaaaaattgttgatgagtatgggttctgtgtgttg
gaccaccatcgtgagcgcatcgggaactttaagatagaacctccagggcttttccgaggc
agaggagaccatcctaaacagggaatgttgaagaagaggattcaacctgaagacgtcatt
atcaactgcagcaaggactctcgtatcccagaacctcctgctggtcaccgctggaaggaa
gttcgtcatgacaacactgtgacgtggctagccagctggaatgagaacgtacaaggatct
tgtaaatatgtgatgctcaatgccaactccaaacttaagggtgagaaggattgggaaaag
tatgaggtggctcgtagactaaagtcgtgtgtggatgccatccgaacccagtaccaggag
gacctcaaatctaaacagatgggcacacgccagagagccgtagccctctactttatcgac
aagctggctctgagagcaggtaatgaaaaggaagagggtgagacggcagacaccgtgggt
tgttgctcactacgcgtggagcacatcactttacacgacacactggatgggcaaaagtgt
gtggtagagttcgactttctgggtaaagattgcatccgctactacaacaaggttcctgtg
gccaaaagggtttacaaaaacctcaagcttttcatggaaaacaagcaaggaggagacgac
ctctttgatcgactgaatactcaagtgctgaataaacacctgacttccctcatgccagga
ttaactgcaaaggtttttaggacatacaacgcctctataaccctgcagcaacagctgaaa
gaacttagcaacatgaaggataatgtggcggagaagttgctctcttacaacagggcaaac
cgtgcggttgcaattctatgtaaccatcagcgggcgccgccaaagaccttcgaacaatcc
atggctaacctgcaagcaaagattgacagcaggaaggagcagctggacttggctaagaaa
gagctaaagcaggccaagaaagaagccaaagggagctcagacaacaagctgctcattgtg
gtggagaagaagaagaaagctgtgcagaggtgtgaggaacagttgctgaagatggaggtt
caggctacagacagagaagagaacaaacagatcgccctgggcacctccaaactcaactac
ctggatccacgcatcaccgtggcctggtgtaagaacatggaggtgccgctggataaaatt
tacaacaaaagcctaagggataagtttgcctgggctgtcgacatgactgaacatgacttt
gtgttctga
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