Ctenopharyngodon idella (grass carp): 127499361
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Entry
127499361 CDS
T08802
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127499361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127499361
Enzymes [BR:
cide01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127499361
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
HECT type E3
127499361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
127499361
NCBI-ProteinID:
XP_051725533
LinkDB
All DBs
Position
18:complement(7081122..7135119)
Genome browser
AA seq
2096 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPIDHTLAGRLQPEQVNQKANSLPESRRSNSKASKAP
PSSAVGSARGHASRRNSLSLSVGSHSIPDPDLEAAGTSGQQGRREGSSTRALKRSSATEP
NITFSPSPAKRPKAVSSHLSESSASGPSAPATSSEVTEPRKAPPSVSTKSKKRRLAAEPA
TARALSKKTASYPGPSGVSSTPSQKRKKADVSSLSSSSSSSLPSSSSAAGPLPPRSEASR
AAKPTKLASKSAASAKAGCSTVTDSSSSCASSSSSSSSSSSAAAGANSCAPQGARLKQGK
DQSKARRSRSASSPSPRRSSRDKEQNKSAGSSKFDWTSRFNSKVNLPKARLSLPGSAKAE
TSSKPGPSGLQAKLASLRKSTKKRSESPPAELPSCRRSTRQKTTGSCASTSRRGSGLGKR
GTAEARRQEKMADSDNNQDGANSSAARTEETPQGASASSSVAGAVGMTTSGESESDDSEM
GRLQALLEARGLPPHLFGPFGPRMSQLFHRTIGSGASSKAQQLLQGLQATGDESQQLQAA
IEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMNHASRALTYMMEALPRSSAV
VVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQ
RNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEEN
LLQQVASRDLLTNIQQLLVLTPPVLSSGMFIMVVRMFSLMCSNCPCLAVQLMKQNIAETL
RFLLCGASNGSCQEQIDLVPRSPQELYELTSLICELMPCLPREGIFAVDAMLKKGSAQTT
EGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISLSTLGRVYTIDFNSMQQINEDTG
TARAIQRKPNPLANPNTGGHLEVRREDARAQLMKEDPELAKCFIKTLFGVLYEVYSSSAG
PAVRHKCLRAILRIIYFADAELLKDVLRNHAVSSHIASMLSSQDLKIVVGSLQMAEILMQ
KLPDVFSVYFRREGVMHQVKNLAESEVFLTSPPKACTSGTASLCTTTITTATTTAASNVT
PDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPT
TTQSPKSSFLASLNPKTWGKLGTQTNSANSEPSRTAGVSGLARVPPKDSVSNNRDKIKAW
IKEQASKFVERYFNSESVDGSNPALNVLQRLCSATEQLNLQVDSGVECLEEISSIVSESD
VSSFEIQHSGLVKQLLLYLTSNSERDTVSRDERIKRFLHVFFGCPIPGQEPLGRLDPTEN
GPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGNGSRGSQALKFFNTHQLKCQLQRHPDCT
NVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIREEDEDSDDDGSDDEIDESLAAQFLNS
GSVRHRLQFYIGEHLLPYNMTVYQAVRQFSLQAEEERESTDDEANPLGRAGIWTKTHTIW
YKPVREDEEGCKDAVGGKRGRAQTAPTKTSPRNAKKQDELWHEGVCPSVTNPLESYLICG
PPEGITFDDPSMEVILLLRVLHSISRYWFYLYDNAACKEIIPTGEFINSKLTAKANRQLQ
DPLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDS
QDSRVAPRLDRKKRTINRDELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTQEFYAL
VSQELQRADLGLWRGEEVTLSNPKAGSQEGTKYMFSSRGLFAVPFGRTTKPAHIAKIKMK
FRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHETSISSHDLVNIDPGVAKSIQHLEDII
RQKKRIEQDRSHTRETLQQALESLNMNGCSVEDLGLDFTLPGFPNIELKKGGKDVPVTIH
NLEEYLRLVVYWTLNEGVSRQFDSFREGFESVFPLHHLQYFYPEELDQLLCGSKSESWDV
KTLMECCRPDHGYTHDSRAVRFLFEVLSSFDAEQQRLFLQFVTGSPRLPVGGFRSLNPPL
TIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6291 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacaca
gccgcggcccagccaatagaccacacgcttgcaggaaggttgcagccagagcaagtaaac
caaaaagcaaattccctacctgaaagtagaagatctaattctaaggcttccaaagcccca
cccagctctgccgtcggctccgcccgcggccacgcctctcgaaggaacagcctctcttta
tctgtgggttcacactcgattccagatccagacttagaagcagcaggaacttcaggccag
caagggagacgggagggcagcagcacccgcgctctcaaacgcagctctgcaacagagccc
aatatcaccttttcgcccagcccggccaagcggcccaaagccgtgtccagccacctttcg
gaaagctcagccagtgggccatcggcccccgcaacctcatctgaagttacagagcctagg
aaggctcctccgtctgtcagcaccaagtccaaaaagagacgattagcagccgagccggct
actgccagagccctgagcaagaagaccgcgtcctaccctggccccagtggggtctcgagc
accccctctcaaaagcgcaagaaggccgacgtctcttcgttgtcgtcctcttcttcctcc
tccctccccagctcaagcagtgcggcaggccccctgccaccccgcagcgaggccagccgg
gcagccaaacccaccaagctggcgtccaaatcggccgcctcagccaaagctgggtgtagc
accgtgactgactcctcctcttcctgtgcctcttcctcatcctcctcttcctcttcctct
tcggctgccgcaggcgccaacagctgtgcccctcagggcgcccggctaaagcagggcaag
gaccagagcaaagcgcggcgatcgcgctctgcatcctccccttccccccgtaggagcagc
cgggataaagagcagaacaagtctgccggctcctccaagtttgactggacgtcccgcttc
aactccaaagtcaacctgccaaaggccagactgtccctgccaggatcggccaaggctgag
acctcctccaagcctgggccctccggactgcaggccaaactagcaagtttgaggaagtcc
actaagaagcgtagtgagtctcccccagcagagctccccagctgtcggaggagcacacgt
cagaagaccacgggctcttgcgccagcaccagtcggcgaggctcaggcctgggcaagcgc
gggactgccgaagctcgccgacaggagaaaatggccgactctgacaacaaccaggatggg
gccaattcctcggccgcgcgcacagaggaaacgccccaaggggcgtcagcgtctagctca
gtagctggagctgttggcatgaccacctctggagagagtgaatcagatgactctgaaatg
ggaagactgcaagctctgctggaggccaggggccttcctcctcacctgtttggccccttt
gggccccgtatgtcgcagctgtttcataggaccattgggagtggagctagctcaaaggca
cagcagctgctgcaggggctgcaggctacaggtgacgaatcccagcaactccaggctgct
atagagatgtgtcagctgctagtgatgggtaacgaggagaccctgggaggattccctgtc
aagagcgttgtacctgccctgatcacactattacagatggagcataattttgatattatg
aatcatgcatctcgcgccctcacctacatgatggaggctctgccgcgctcctcggctgtg
gtggtagacgccatcccagtcttcctggaaaagcttcaggtaatacagtttattgatgtg
gcagaacaagccttgaccgccctggagatgttgtcacggaggcacagcaaagccatctta
caggctggaggtctagctgactgtttgctgtacttggagttcttcagcatcaatgctcag
aggaacgcattagccatcgctgctaactgctgtcagagcatcacgccggacgagtttcac
tttgtcgctgactctctgcccctgctcactcagagactcacacaccaggataaaaaatct
gtcgaaagcacttgtctctgttttgccaggctggtggacaactttcagcatgaagagaac
ctgttacagcaggtggcgtcacgggacctgctgaccaacatccagcagctgctggttctt
actccaccggtgctcagctccggcatgttcatcatggtagtgcgcatgttctctctcatg
tgctccaattgcccatgtctggctgtgcagctcatgaaacagaatatagcagagaccctg
cgtttcctgctctgtggagcatctaatgggagctgtcaagaacagattgaccttgttccc
agaagcccccaggagctttatgaactcacctcacttatttgtgagctgatgccatgtctg
cccagagagggcatctttgcggttgatgccatgctgaagaaaggcagtgcccagactaca
gagggcgccatctggcagtggagagatgacagaggcctgtggcacccttacaaccgcatt
gacagccgtatcattgaaactgcacaccagaacggagaagatgagataagtctgtcgaca
ctcggccgtgtctacaccatcgacttcaactctatgcagcagataaatgaagacactggc
actgcccgtgccattcagaggaaacccaaccctctggccaaccccaacacaggagggcac
ttggaggtgcggcgagaggacgcacgtgctcagctgatgaaagaggaccctgagttggcc
aagtgcttcataaagactctgtttggggttctttatgaggtgtacagctcctcagccggg
cctgccgtcagacacaagtgccttagagccatcctccggatcatctacttcgcagatgca
gagctgcttaaagacgtactgcgcaaccatgctgtgtctagtcacatagcttccatgctg
tccagtcaggacctgaagattgtagtgggctctctgcagatggctgagatcctcatgcag
aagctaccagatgtattcagtgtttatttcaggcgagaaggtgtgatgcaccaggtaaag
aacctagctgaatctgaagtgttcctcaccagccctccgaaagcgtgcaccagtggcaca
gctagtctttgcaccaccaccatcaccacagcaaccactacagctgcctctaatgtcaca
cccgacttaggctcccccagtttccagcacagcatggacgactcgctggacctcagtcca
cagggtaggttgagtgatgttctgaaaagaaaacgccttcctaaaagaggaccgaggcgt
cccaagtactctccacccagagacgatgacaaagtggataatcaggctaagagtccaaca
accacacaatcccccaagtcctctttcctggccagtttgaatcccaagacctggggtaag
ctggggactcagacaaacagcgccaactcagaaccctcgcgcactgcaggggtcagtggt
ctggcacgagtgccacctaaggactcggtttcaaacaacagggataagataaaggcttgg
ataaaggaacaagccagtaagtttgtggagcgttacttcaattctgaaagcgtggatgga
agcaaccctgcactgaatgtcctgcaaagactctgcagtgccacagaacagctgaacttg
caggttgacagtggtgtagagtgtctagaggagataagcagtattgtatctgaatcagac
gtgtcctccttcgagatccagcacagtgggcttgtgaagcagctgttgttgtatctgaca
tcaaatagtgaacgggacactgtcagtagagatgagagaatcaagaggttcctgcacgtg
ttcttcggctgcccgataccagggcaggaacctctggggcgtttggacccaacggagaat
ggcccactgctagcactggtgcacaagatgaacaactgccttagtcagatggaacagttt
cctgttaaagtgcatgattttcccagtggaaatggcaatggaagcaggggttcacaagcc
cttaagttctttaacacccatcagctgaagtgccagctgcaaagacacccagactgcacc
aatgtcaagcagtggaagggggggccggtcaaaattgaccccttggccctagtacaggct
attgagagataccttgtggttagagggtatggaaggatcagggaggaggatgaagacagt
gatgatgatggttccgatgatgagattgatgaatctttggctgcccagttcttgaattct
gggagtgtacgtcacaggctacagttctacataggagagcacctgctgccgtacaacatg
actgtttatcaggctgtcaggcagttcagcttacaggccgaggaggagagagagagcaca
gatgatgaagcaaaccctctgggacgtgctggcatctggaccaaaacacacactatatgg
tataagccagtcagagaggatgaggagggttgtaaagatgctgttggagggaaaaggggt
cgtgcacaaacggctcccactaaaacctcccctcgaaatgccaaaaaacaagacgaactg
tggcatgagggtgtgtgtcccagtgtgacaaacccattagagtcatacctcatttgtggt
cctccagagggcatcacttttgatgacccttccatggaggtgattctgctgctgagggtc
ctgcactccatcagtagatattggttctacctgtacgacaatgctgcatgtaaggagatc
attcccactggtgagtttattaacagtaaactgacagcaaaggccaacagacagttgcag
gatccactggtcatcatgacaggaaacatccccacctggctgactgagctcggaaagacc
tgtccgttcttcttcccgtttgacacacggcagatgctcttctacgtgactgcatttgac
cgcgatcgtgccatgcaacgcctgcttgacaccaaccctgagattaaccagtctgactca
caagacagccgtgtcgctccacgccttgacaggaagaagagaacgataaaccgtgatgag
ctcctgaagcaagcggagtcggtaatgcaagatctcgggagttccagagccatgctggaa
attcaatacgagaacgaggtgggaacaggtctcggccctacgcaagagttctatgctctg
gtgtctcaggagttgcagagggctgatttgggtctttggagaggagaggaagtcactctc
tccaaccctaaagcagggagtcaggagggtaccaagtacatgttcagttccaggggtttg
tttgctgtaccatttggacgaactaccaaaccagctcacatcgccaagatcaaaatgaag
tttcgttttcttgggaaattaatggctaaagcgatcatggacttcagattgttggatttg
cctttaggtttgccattctataagtggatgctgaggcacgagacctccatcagctctcat
gacctggttaacattgatcctggtgtcgccaaatccatccagcacttggaggacatcatc
cgccagaagaagagaatagagcaggacagatcacatactcgggagaccctgcagcaggcc
ttggagagtctcaacatgaacggctgctcggtggaagatctggggctggacttcactctg
cctggattcccaaacatcgagttgaaaaaagggggcaaagacgtgccagtcaccattcac
aacttggaggaatacctcagattggtggtctactggacactcaatgagggcgtctcccgg
cagtttgattcgtttagggaaggatttgagtctgtcttccctctgcaccacctgcagtac
ttctatcctgaagagctggatcagttgttatgtggcagcaagtcagagtcctgggatgtg
aagacactaatggagtgctgcagaccggaccacggctacacacatgacagccgtgcagtg
cggttcctttttgaggtgctgagcagttttgatgcggagcagcagagacttttcctgcag
tttgtcacagggagccccagacttcctgtcggaggattccggagtttgaaccctcccctc
accatcgttcggaagacgttcgagtcaacagagaacccagacgacttcctcccgtcggtg
atgacgtgtgtgaactacctgaaactgccggattactccagcatcgagatcatgcgcgag
aaactgttgattgctgctcgcgagggccagcagtctttccatctgtcttga
DBGET
integrated database retrieval system
