Ctenopharyngodon idella (grass carp): 127499409
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Entry
127499409 CDS
T08802
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04115
p53 signaling pathway
cide04120
Ubiquitin mediated proteolysis
cide04137
Mitophagy - animal
cide04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127499409
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
127499409
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
127499409
09143 Cell growth and death
04115 p53 signaling pathway
127499409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127499409
Enzymes [BR:
cide01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127499409
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
127499409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
127499409
NCBI-ProteinID:
XP_051725631
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Position
18:complement(23463844..23485075)
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AA seq
334 aa
AA seq
DB search
MSATVRLQPVYSWKGVLKLFSCIAARTASKTKEVHTFQGKKKDVLGNHMDEEMSRQTATA
LPTGTSKCPPSQRVPNLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPK
LTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYSC
PCPGASCKWQGSLDAVMPHLLHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFH
FMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIA
TAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctactgttagactacagcctgtgtactcatggaagggggtgctcaagctcttc
tcttgcatagcggcccgaactgctagcaaaactaaagaggtccacacatttcaaggaaaa
aagaaagacgtacttgggaatcatatggacgaagaaatgagtcgccagactgccacagcg
ctgcccacaggaacctctaagtgtcccccttctcagcgcgtcccaaacttgtcgggcacc
accgcatccaacagtgacctcgccagcctgtttgagtgcccggtttgttttgactatgtg
ctgccgcccatcctgcagtgccagagcgggcatttggtttgtagcaactgccggcccaaa
ctcacctgctgccctacctgcagaggcccacttgggtcaattcgcaatttggccatggag
aaagtggccaactcggtgcttttcccttgcaagtacgcctcatcaggctgcgaagttacc
cttccgcacacagacaaggctgaacacgaggagctttgtgaattccggccatactcttgc
ccctgtcctggcgcctcctgcaagtggcagggatctctcgatgccgtcatgcctcacttg
ctgcaccagcacaagtccataaccacgctacaaggtgaggatattgtcttcctggccaca
gacatcaacttgcctggggcagtggactgggtcatgatgcagtcgtgcttcggcttccat
tttatgctcgtgttagagaagcaggagaaatacgacggccaccagcagttctttgccatc
gtgcagctgatcggcacacgaaaacaggcggaaaacttcgcctaccggctggagttaaat
ggccatcggcggcggctcacctgggaggcgacgccacgttccatccatgagggcattgcc
accgccatcatgaacagtgactgcctggtgtttgacacctccattgctcagctgtttgcg
gagaatggcaacctgggcatcaatgtcaccatatccatgtgctga
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