Ctenopharyngodon idella (grass carp): 127499414
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Entry
127499414 CDS
T08802
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127499414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127499414
Spliceosome [BR:
cide03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
127499414
Complex B
127499414
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
Psu
Motif
Other DBs
NCBI-GeneID:
127499414
NCBI-ProteinID:
XP_051725641
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All DBs
Position
18:complement(17135123..17138418)
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AA seq
281 aa
AA seq
DB search
MAGQEMRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSPTLKMRGQAFVIFK
EINSASNALRSMQGFPFYDKPMRIQYAKQDSDIIAKMKGTYVERDRKKEKKKPKAPEPGA
GKKGGAAATPAMAGVPAAMPGMPPMSQAPRMMPMPGQPPYMPPPGMMPPPGMAPGQMPPG
AMPPGQMMPGQMPGQMPQQVSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP
GRHDIAFVEFDNEVQAGAAREALQGFKITQSNAMKISFAKK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggctggtcaggagatgcggctaaaccacactatttacattaacaacttgaatgagaag
atcaaaaaagatgaactgaaaaagtcgttgtatgctatattctcccagtttggacaaatc
ctggacatccttgtttctcctacactgaaaatgaggggtcaggcctttgtgatcttcaag
gagatcaacagtgcttccaatgcactccgctctatgcaaggcttccctttttatgataaa
cccatgcgtattcagtatgcaaagcaggactctgatatcattgcgaaaatgaagggcacg
tatgtggagcgagaccgtaagaaagagaagaaaaagcctaaagcccctgaaccaggtgct
gggaaaaagggtggtgctgctgccacacctgctatggccggagtacctgcagctatgcca
ggaatgccaccaatgagccaagctcctcgcatgatgccaatgcccggtcagcctccctac
atgcctccgcctgggatgatgcctccgcctggcatggcaccaggacagatgccaccaggt
gccatgccaccaggtcagatgatgccaggacaaatgcctggccagatgccacagcaggtg
tcggaaaaccctcccaaccacatcctgtttctcaccaatctcccagaggagaccaacgag
ctcatgctgtccatgctgttcaaccagttccctggattcaaagaagtccgtcttgtcccc
ggccgtcacgacatcgcctttgtggagtttgataatgaggtgcaggcgggtgcagccaga
gaagctttgcaaggctttaagatcacgcagagcaatgcaatgaaaatctcctttgcaaag
aaataa
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