Ctenopharyngodon idella (grass carp): 127499417
Help
Entry
127499417 CDS
T08802
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127499417
03036 Chromosome and associated proteins [BR:
cide03036
]
127499417
Transcription factors [BR:
cide03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127499417
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127499417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451_C
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_ZN142
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
127499417
NCBI-ProteinID:
XP_051725647
LinkDB
All DBs
Position
18:complement(21394282..21401784)
Genome browser
AA seq
823 aa
AA seq
DB search
MDTYGSANSTLLFTICKVDSSLSQCVYVLPMEGGPTEAVVEDAGDAFKAKECKTYQRRRE
DEEVGAELLQAAGLEQAQVEGEPVVEAQQQLVESVVNVNSSVEMMVMDSLDPALLQMKTE
VMEAAVGAPVGAAHEATVTTVDDTQIITLQVVNMEEQQLGLGELQLVQVPVSAVPVTAAT
VEELQGTLVDATAMPKDGEPVICHTLPLPEGFQVVKVGANGEVETVEQDELQAQEDQPPQ
QEEEEMAEAQNEDPTWSKDPDYTPPVKKVKKTKKSKLRYNTEGDKDMDVSVYDFEEEQQE
GLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPH
KCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCS
MCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHA
RFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGRKCRYCDA
VFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMVMHKRTHTGEKPYACNQCEKTFRQ
KQLLDMHFRRYHDPNFVPTSFVCTKCGKTFTRRNTMARHAENCTGMDSTDGENGAPPKRA
RGGRKRKMRSRKDDDDDDSDEHGDPDLDDIDEEEEDEPLDDEQMDVEQAPPSVPIPAPAE
PPVKRKRGRPPKNAPKASPTKSIAKTTTAAAAIIQVEDESTGAIENIIVKKEPEGSDAVV
AAQPVVEEVEAVEAGVETVQLAVPEAAPNGDLTPEMILSMMDR
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggatacctatggaagtgccaactcaactcttttgttcaccatttgcaaggttgatagc
agcctgtctcagtgtgtgtatgtattacccatggaagggggaccgactgaggcagtggtg
gaagatgcaggggatgctttcaaggccaaggaatgtaagacataccaaaggcgacgagaa
gatgaggaagtaggagccgaattgctgcaggctgctgggttagagcaagcccaggttgaa
ggagagcctgtggtggaggcccagcaacagttggtcgagagtgtcgttaatgtcaacagc
agtgtggagatgatggtgatggactccctggaccctgccctcctccagatgaagacagaa
gtcatggaggctgctgtcggagcacctgttggtgctgcccatgaagccacggttacaact
gtcgatgacactcagatcatcactctgcaggtagtgaacatggaggagcagcagttgggc
ttgggagagttgcagctagtgcaggtgcctgtttctgctgtgcccgtcactgctgccact
gtggaagagctgcaagggacactggttgatgccactgccatgcctaaagatggggagcct
gtcatctgtcacaccctgccattgcctgagggcttccaggtggtcaaggtgggtgcaaat
ggagaagtggaaactgtggagcaagatgagctccaggcccaagaggatcagcctccacag
caggaggaggaggagatggctgaagcccaaaatgaagaccccacgtggtctaaagatcca
gattacacaccccctgttaaaaaggttaagaagactaagaaaagcaagctgcgctacaac
acggagggcgataaagacatggatgtgtctgtgtatgactttgaggaggagcagcaggag
ggactgctctctgaagtcaatgctgagaaagttgtgggtaatatgaaaccgcccaaacca
accaaaatcaaaaagaaaggtgttaagaagacattccagtgtgagctgtgcagttacacc
tgcccgcgccgttccaatctggatcgccacatgaagagccacacggatgagaggcctcac
aagtgccatctttgtggacgagccttcaggactgtgacattgctgagaaaccatctcaac
acccacacaggcaccagaccacataagtgcactgactgtgacatggccttcgtcaccagt
ggagagctggtgcgacacagacgctacaagcacactcatgagaaaccattcaagtgctcc
atgtgtgactatgccagtgttgaggttagcaagctgaagcggcacattcgctcccacact
ggagaacgtccgttccagtgcagtctgtgcagctatgccagcagagatacctataagctg
aagagacatatgaggacccactcaggagagaagccctatgagtgctatatctgtcatgct
cgttttacccagagtggtaccatgaagatgcacattctgcagaagcacacagaaaatgtg
gcaaaatttcactgcccccactgcgacacagttattgctcgcaagagcgatctcggtgtg
cacctccgtaagcagcattcctacattgagcagggcaggaagtgtcgttactgtgatgct
gtgttccatgagcgctatgctctcatccagcatcagaagtcccacaaaaatgagaaacgc
ttcaagtgtgaccagtgtgactatgcgtgccgtcaggagcgtcacatggtcatgcacaag
cgcacccatactggggagaagccatacgcctgcaaccaatgtgagaagactttcaggcag
aaacagctcctggatatgcactttcggcgctaccatgaccccaactttgtacccacatcc
tttgtttgcaccaagtgcggaaagaccttcactcgcaggaatactatggccagacatgca
gagaactgcactggtatggattctactgatggagagaatggagctccacctaaaagggct
cgtggtggcagaaagaggaagatgcgctctagaaaggatgatgatgacgatgatagcgat
gagcatggagatcctgaccttgatgacattgatgaagaggaagaggatgagcctcttgat
gatgagcagatggatgtggaacaggctccacccagcgttcccatccccgcaccagctgaa
cctcctgtcaagaggaaacggggcagaccccccaagaacgcacccaaggcatctcctaca
aagtctatcgccaaaaccaccacagcagctgctgccattatccaggtggaggatgaaagc
acaggggccattgagaacatcattgtgaagaaggagcctgagggctctgatgcagttgta
gctgcccagccagtggtagaggaagtggaggcagtcgaggctggtgtagaaacagtgcag
ctagctgtccctgaagctgcacctaatggtgatcttactcctgaaatgatccttagcatg
atggaccggtga
DBGET
integrated database retrieval system
